Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.91□□□□□ -2.26
CXCL1P09341 RNU6-707P-201ENST00000364647 95 ntBASIC0.91□□□□□ -2.26
CXCL1P09341 SNORA22-201ENST00000383907 134 ntBASIC0.91□□□□□ -2.26
CXCL1P09341 SNORA22C-201ENST00000384614 134 ntBASIC0.91□□□□□ -2.26
CXCL1P09341 MIR513A1-201ENST00000385138 129 ntBASIC0.91□□□□□ -2.26
CXCL1P09341 MIR618-201ENST00000385287 98 ntBASIC0.91□□□□□ -2.26
CXCL1P09341 SNORA40.6-201ENST00000391153 128 ntBASIC0.91□□□□□ -2.26
CXCL1P09341 UBE2V1P15-201ENST00000407776 448 ntBASIC0.91□□□□□ -2.26
CXCL1P09341 BX664727.1-201ENST00000416024 466 ntBASIC0.91□□□□□ -2.26
CXCL1P09341 MRPL35P3-201ENST00000421557 364 ntBASIC0.91□□□□□ -2.26
CXCL1P09341 AL355994.1-201ENST00000424379 260 ntBASIC0.91□□□□□ -2.26
CXCL1P09341 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.91□□□□□ -2.26
CXCL1P09341 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.91□□□□□ -2.26
CXCL1P09341 RPS29P28-201ENST00000446439 141 ntBASIC0.91□□□□□ -2.26
CXCL1P09341 SNORD97-201ENST00000459187 142 ntBASIC0.91□□□□□ -2.26
CXCL1P09341 FAM92A1P2-202ENST00000504766 877 ntBASIC0.91□□□□□ -2.26
CXCL1P09341 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.91□□□□□ -2.26
CXCL1P09341 AC093809.1-201ENST00000509155 340 ntBASIC0.91□□□□□ -2.26
CXCL1P09341 MTCYBP16-201ENST00000509187 1129 ntBASIC0.91□□□□□ -2.26
CXCL1P09341 AC117532.1-201ENST00000514638 323 ntBASIC0.91□□□□□ -2.26
CXCL1P09341 SNORA31.3-201ENST00000516029 96 ntBASIC0.91□□□□□ -2.26
CXCL1P09341 RNU6-390P-201ENST00000516259 103 ntBASIC0.91□□□□□ -2.26
CXCL1P09341 AC109329.1-201ENST00000518744 317 ntBASIC0.91□□□□□ -2.26
CXCL1P09341 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.91□□□□□ -2.26
CXCL1P09341 OR6C7P-201ENST00000547875 934 ntBASIC0.91□□□□□ -2.26
CXCL1P09341 AC093012.1-202ENST00000549403 582 ntBASIC0.91□□□□□ -2.26
CXCL1P09341 SNRPGP1-201ENST00000553864 222 ntBASIC0.91□□□□□ -2.26
CXCL1P09341 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.91□□□□□ -2.26
CXCL1P09341 BBIP1P1-201ENST00000602999 279 ntBASIC0.91□□□□□ -2.26
CXCL1P09341 AC099063.3-201ENST00000642066 185 ntBASIC0.91□□□□□ -2.26
CXCL1P09341 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
CXCL1P09341 ZNF209P-201ENST00000593450 2304 ntBASIC0.9□□□□□ -2.26
CXCL1P09341 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.9□□□□□ -2.26
CXCL1P09341 AC092125.1-201ENST00000562568 1995 ntBASIC0.9□□□□□ -2.26
CXCL1P09341 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
CXCL1P09341 RNU6-1010P-201ENST00000362757 107 ntBASIC0.9□□□□□ -2.27
CXCL1P09341 SNORD114-19-201ENST00000363072 75 ntBASIC0.9□□□□□ -2.27
CXCL1P09341 RNU6-546P-201ENST00000383991 107 ntBASIC0.9□□□□□ -2.27
CXCL1P09341 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.9□□□□□ -2.27
CXCL1P09341 RNU2-32P-201ENST00000411193 191 ntBASIC0.9□□□□□ -2.27
CXCL1P09341 AL591704.2-201ENST00000421658 181 ntBASIC0.9□□□□□ -2.27
CXCL1P09341 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.9□□□□□ -2.27
CXCL1P09341 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC0.9□□□□□ -2.27
CXCL1P09341 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.9□□□□□ -2.27
CXCL1P09341 AC010631.1-201ENST00000474150 156 ntBASIC0.9□□□□□ -2.27
CXCL1P09341 AL121594.1-201ENST00000475906 575 ntBASIC0.9□□□□□ -2.27
CXCL1P09341 AC004223.1-201ENST00000479840 271 ntBASIC0.9□□□□□ -2.27
CXCL1P09341 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.9□□□□□ -2.27
CXCL1P09341 HMGB1P28-201ENST00000507778 552 ntBASIC0.9□□□□□ -2.27
CXCL1P09341 RNU6-583P-201ENST00000516012 92 ntBASIC0.9□□□□□ -2.27
CXCL1P09341 RNU1-41P-201ENST00000516161 162 ntBASIC0.9□□□□□ -2.27
CXCL1P09341 RNU1-48P-201ENST00000516400 162 ntBASIC0.9□□□□□ -2.27
CXCL1P09341 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.9□□□□□ -2.27
CXCL1P09341 AL161670.1-201ENST00000554348 137 ntBASIC0.9□□□□□ -2.27
CXCL1P09341 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.9□□□□□ -2.27
CXCL1P09341 AC122134.1-202ENST00000569111 1201 ntBASIC0.9□□□□□ -2.27
CXCL1P09341 AC021171.1-201ENST00000603137 706 ntBASIC0.9□□□□□ -2.27
CXCL1P09341 AL645939.4-201ENST00000604495 135 ntBASIC0.9□□□□□ -2.27
CXCL1P09341 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.9□□□□□ -2.27
CXCL1P09341 MIR8084-201ENST00000614105 89 ntBASIC0.9□□□□□ -2.27
CXCL1P09341 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
CXCL1P09341 U6.99-201ENST00000637524 83 ntBASIC0.9□□□□□ -2.27
CXCL1P09341 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
CXCL1P09341 AC092447.10-201ENST00000620607 1652 ntBASIC0.9□□□□□ -2.27
CXCL1P09341 AP000560.1-201ENST00000624150 1937 ntBASIC0.89□□□□□ -2.27
CXCL1P09341 RNU6-512P-201ENST00000364438 103 ntBASIC0.89□□□□□ -2.27
CXCL1P09341 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
CXCL1P09341 RNU6-439P-201ENST00000384188 106 ntBASIC0.89□□□□□ -2.27
CXCL1P09341 AL133475.1-201ENST00000404414 305 ntBASIC0.89□□□□□ -2.27
CXCL1P09341 OR6C66P-201ENST00000414917 930 ntBASIC0.89□□□□□ -2.27
CXCL1P09341 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.89□□□□□ -2.27
CXCL1P09341 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.89□□□□□ -2.27
CXCL1P09341 AC092648.1-201ENST00000425870 423 ntBASIC0.89□□□□□ -2.27
CXCL1P09341 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.89□□□□□ -2.27
CXCL1P09341 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC0.89□□□□□ -2.27
CXCL1P09341 APOA2-205ENST00000468465 421 ntTSL 2 BASIC0.89□□□□□ -2.27
CXCL1P09341 AC132942.1-201ENST00000486753 483 ntBASIC0.89□□□□□ -2.27
CXCL1P09341 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.89□□□□□ -2.27
CXCL1P09341 AC119751.5-201ENST00000514077 770 ntBASIC0.89□□□□□ -2.27
CXCL1P09341 AC022616.8-201ENST00000533569 253 ntBASIC0.89□□□□□ -2.27
CXCL1P09341 AC023538.1-201ENST00000534576 736 ntBASIC0.89□□□□□ -2.27
CXCL1P09341 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.89□□□□□ -2.27
CXCL1P09341 AC093249.1-201ENST00000567049 203 ntBASIC0.89□□□□□ -2.27
CXCL1P09341 MIR4782-201ENST00000577987 79 ntBASIC0.89□□□□□ -2.27
CXCL1P09341 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC0.89□□□□□ -2.27
CXCL1P09341 AC023043.2-201ENST00000589678 1026 ntBASIC0.89□□□□□ -2.27
CXCL1P09341 AC073410.2-201ENST00000603240 332 ntBASIC0.89□□□□□ -2.27
CXCL1P09341 AC123912.5-201ENST00000605470 343 ntBASIC0.89□□□□□ -2.27
CXCL1P09341 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.89□□□□□ -2.27
CXCL1P09341 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
CXCL1P09341 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
CXCL1P09341 AL079343.1-201ENST00000572358 1771 ntBASIC0.88□□□□□ -2.27
CXCL1P09341 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
CXCL1P09341 RNU6-271P-201ENST00000363858 105 ntBASIC0.88□□□□□ -2.27
CXCL1P09341 Y_RNA.500-201ENST00000384466 111 ntBASIC0.88□□□□□ -2.27
CXCL1P09341 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
CXCL1P09341 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.88□□□□□ -2.27
CXCL1P09341 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.88□□□□□ -2.27
CXCL1P09341 AC104651.1-201ENST00000427559 735 ntBASIC0.88□□□□□ -2.27
CXCL1P09341 MTCO1P3-201ENST00000429327 192 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms