Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 DEFB108A-201ENST00000530110 222 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 AP000907.2-201ENST00000530827 353 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 AC023538.1-201ENST00000534576 736 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 AC135279.1-201ENST00000543493 504 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 AC068338.1-201ENST00000565567 176 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 AC090616.3-201ENST00000582184 217 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.35□□□□□ -2.19
COL4A2P08572 AL596327.1-201ENST00000603629 213 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 RNU4-5P-201ENST00000607255 135 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 AC126118.1-201ENST00000607744 628 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 AC072039.2-201ENST00000608883 439 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 AL355472.4-201ENST00000610233 626 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.35□□□□□ -2.19
COL4A2P08572 PVT1_3.1-201ENST00000620853 95 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 AP002782.1-201ENST00000623107 614 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.35□□□□□ -2.19
COL4A2P08572 AL133216.2-202ENST00000634512 349 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 AC006927.4-201ENST00000639187 543 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
COL4A2P08572 RNU6-778P-201ENST00000363269 103 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
COL4A2P08572 RNU6-1080P-201ENST00000383982 107 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 BTF3L4P3-201ENST00000418879 476 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.35□□□□□ -2.19
COL4A2P08572 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.35□□□□□ -2.19
COL4A2P08572 GPM6BP2-201ENST00000432046 144 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 USP9YP24-201ENST00000434374 697 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 MTND3P1-201ENST00000441336 220 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 USP9YP17-201ENST00000444617 696 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 GPM6BP1-201ENST00000446387 144 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 PTENP1-201ENST00000447117 1215 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 MTATP6P7-201ENST00000453315 681 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 CECR9-201ENST00000453421 199 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.35□□□□□ -2.19
COL4A2P08572 AC013267.1-201ENST00000458227 267 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 AC107626.1-201ENST00000471084 183 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 AC104685.1-201ENST00000502445 371 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.35□□□□□ -2.19
COL4A2P08572 AP003033.1-201ENST00000527244 415 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.35□□□□□ -2.19
COL4A2P08572 AC093012.1-202ENST00000549403 582 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.35□□□□□ -2.19
COL4A2P08572 AL133153.1-201ENST00000557756 303 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 AC021739.1-201ENST00000559631 174 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.35□□□□□ -2.19
COL4A2P08572 MTND3P19-201ENST00000603825 345 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 AL158042.1-201ENST00000605338 460 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 MIR6078-201ENST00000611069 100 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 uc_338.14-201ENST00000613162 166 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 AC005296.1-201ENST00000616145 209 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 AC091965.5-201ENST00000624785 342 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.34□□□□□ -2.19
COL4A2P08572 AC110491.1-201ENST00000562191 2010 ntBASIC1.34□□□□□ -2.19
COL4A2P08572 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.34□□□□□ -2.19
COL4A2P08572 AC010329.5-201ENST00000623497 2174 ntBASIC1.34□□□□□ -2.19
COL4A2P08572 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
COL4A2P08572 RNU6-1167P-201ENST00000363227 94 ntBASIC1.34□□□□□ -2.2
COL4A2P08572 RNU6-288P-201ENST00000363690 104 ntBASIC1.34□□□□□ -2.2
COL4A2P08572 RNU6-621P-201ENST00000364752 109 ntBASIC1.34□□□□□ -2.2
COL4A2P08572 MIR19A-201ENST00000384878 82 ntBASIC1.34□□□□□ -2.2
COL4A2P08572 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.34□□□□□ -2.2
COL4A2P08572 POLR2J4-204ENST00000418424 324 ntBASIC1.34□□□□□ -2.2
COL4A2P08572 AL445669.1-201ENST00000426743 755 ntBASIC1.34□□□□□ -2.2
COL4A2P08572 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.34□□□□□ -2.2
COL4A2P08572 AC098831.1-201ENST00000440661 216 ntBASIC1.34□□□□□ -2.2
COL4A2P08572 MTATP6P30-201ENST00000443540 664 ntBASIC1.34□□□□□ -2.2
COL4A2P08572 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.34□□□□□ -2.2
COL4A2P08572 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.34□□□□□ -2.2
COL4A2P08572 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.34□□□□□ -2.2
COL4A2P08572 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.2
COL4A2P08572 AF131216.2-201ENST00000512316 564 ntBASIC1.34□□□□□ -2.2
COL4A2P08572 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.34□□□□□ -2.2
COL4A2P08572 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.34□□□□□ -2.2
COL4A2P08572 RNU6-927P-201ENST00000516199 100 ntBASIC1.34□□□□□ -2.2
COL4A2P08572 RNA5SP61-201ENST00000516453 100 ntBASIC1.34□□□□□ -2.2
COL4A2P08572 BTF3P12-201ENST00000519620 469 ntBASIC1.34□□□□□ -2.2
COL4A2P08572 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.34□□□□□ -2.2
COL4A2P08572 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.34□□□□□ -2.2
COL4A2P08572 PSMA3P-201ENST00000555485 635 ntBASIC1.34□□□□□ -2.2
COL4A2P08572 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.34□□□□□ -2.2
COL4A2P08572 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.34□□□□□ -2.2
COL4A2P08572 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.34□□□□□ -2.2
COL4A2P08572 AC090897.2-201ENST00000581715 130 ntBASIC1.34□□□□□ -2.2
COL4A2P08572 AC091057.3-201ENST00000602684 733 ntBASIC1.34□□□□□ -2.2
COL4A2P08572 BNIP3P9-201ENST00000603714 553 ntBASIC1.34□□□□□ -2.2
COL4A2P08572 AC080013.3-201ENST00000606839 578 ntBASIC1.34□□□□□ -2.2
COL4A2P08572 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.34□□□□□ -2.2
COL4A2P08572 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.34□□□□□ -2.2
COL4A2P08572 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
COL4A2P08572 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
COL4A2P08572 NACAP2-201ENST00000318548 624 ntBASIC1.33□□□□□ -2.2
COL4A2P08572 Y_RNA.374-201ENST00000365606 101 ntBASIC1.33□□□□□ -2.2
COL4A2P08572 RNU6-701P-201ENST00000384059 107 ntBASIC1.33□□□□□ -2.2
COL4A2P08572 MIR122-201ENST00000385044 85 ntBASIC1.33□□□□□ -2.2
COL4A2P08572 AC096649.2-201ENST00000416186 393 ntBASIC1.33□□□□□ -2.2
COL4A2P08572 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.33□□□□□ -2.2
COL4A2P08572 AC005094.1-201ENST00000440420 368 ntBASIC1.33□□□□□ -2.2
COL4A2P08572 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
COL4A2P08572 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms