Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.81
HLA-DOAP06340 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.77□□□□□ -1.81
HLA-DOAP06340 RNU1-140P-201ENST00000365040 165 ntBASIC3.77□□□□□ -1.81
HLA-DOAP06340 Y_RNA.399-201ENST00000383955 105 ntBASIC3.77□□□□□ -1.81
HLA-DOAP06340 RPS12P24-201ENST00000412619 387 ntBASIC3.77□□□□□ -1.81
HLA-DOAP06340 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DOAP06340 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DOAP06340 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DOAP06340 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.77□□□□□ -1.81
HLA-DOAP06340 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DOAP06340 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DOAP06340 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DOAP06340 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DOAP06340 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.77□□□□□ -1.81
HLA-DOAP06340 AL049874.1-201ENST00000489560 388 ntBASIC3.77□□□□□ -1.81
HLA-DOAP06340 HMGB1P22-201ENST00000505315 124 ntBASIC3.77□□□□□ -1.81
HLA-DOAP06340 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.77□□□□□ -1.81
HLA-DOAP06340 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DOAP06340 Y_RNA.670-201ENST00000516255 105 ntBASIC3.77□□□□□ -1.81
HLA-DOAP06340 SCARNA13-201ENST00000516672 275 ntBASIC3.77□□□□□ -1.81
HLA-DOAP06340 MIR2276-201ENST00000516886 89 ntBASIC3.77□□□□□ -1.81
HLA-DOAP06340 RN7SKP295-201ENST00000517264 153 ntBASIC3.77□□□□□ -1.81
HLA-DOAP06340 AF186190.1-201ENST00000517470 480 ntBASIC3.77□□□□□ -1.81
HLA-DOAP06340 RNU6-323P-201ENST00000521915 107 ntBASIC3.77□□□□□ -1.81
HLA-DOAP06340 AC104763.2-201ENST00000604179 382 ntBASIC3.77□□□□□ -1.81
HLA-DOAP06340 AC005014.2-201ENST00000607795 599 ntBASIC3.77□□□□□ -1.81
HLA-DOAP06340 AC009229.3-201ENST00000608056 282 ntBASIC3.77□□□□□ -1.81
HLA-DOAP06340 AC010205.1-201ENST00000616668 449 ntBASIC3.77□□□□□ -1.81
HLA-DOAP06340 AC007485.1-201ENST00000616755 206 ntBASIC3.77□□□□□ -1.81
HLA-DOAP06340 AC098657.3-201ENST00000620434 263 ntBASIC3.77□□□□□ -1.81
HLA-DOAP06340 AC099506.2-201ENST00000623074 221 ntBASIC3.77□□□□□ -1.81
HLA-DOAP06340 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DOAP06340 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DOAP06340 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DOAP06340 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DOAP06340 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
HLA-DOAP06340 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
HLA-DOAP06340 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DOAP06340 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DOAP06340 RNU6-1115P-201ENST00000362490 106 ntBASIC3.76□□□□□ -1.81
HLA-DOAP06340 Y_RNA.112-201ENST00000363250 102 ntBASIC3.76□□□□□ -1.81
HLA-DOAP06340 RNU6-335P-201ENST00000364563 113 ntBASIC3.76□□□□□ -1.81
HLA-DOAP06340 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DOAP06340 MIR568-201ENST00000385036 95 ntBASIC3.76□□□□□ -1.81
HLA-DOAP06340 MIR708-201ENST00000390708 88 ntBASIC3.76□□□□□ -1.81
HLA-DOAP06340 RNU6-1106P-201ENST00000390845 107 ntBASIC3.76□□□□□ -1.81
HLA-DOAP06340 AL360182.1-201ENST00000397433 468 ntBASIC3.76□□□□□ -1.81
HLA-DOAP06340 RAC1P3-201ENST00000416129 580 ntBASIC3.76□□□□□ -1.81
HLA-DOAP06340 AL160275.3-201ENST00000423876 471 ntBASIC3.76□□□□□ -1.81
HLA-DOAP06340 AL358176.2-201ENST00000425769 204 ntBASIC3.76□□□□□ -1.81
HLA-DOAP06340 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DOAP06340 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DOAP06340 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DOAP06340 IPO7P1-201ENST00000442031 636 ntBASIC3.76□□□□□ -1.81
HLA-DOAP06340 HMGN2P21-201ENST00000447764 270 ntBASIC3.76□□□□□ -1.81
HLA-DOAP06340 MTATP8P1-201ENST00000467115 207 ntBASIC3.76□□□□□ -1.81
HLA-DOAP06340 AC021205.2-201ENST00000480069 347 ntBASIC3.76□□□□□ -1.81
HLA-DOAP06340 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DOAP06340 AC026782.1-201ENST00000512952 449 ntBASIC3.76□□□□□ -1.81
HLA-DOAP06340 Y_RNA.720-201ENST00000517166 92 ntBASIC3.76□□□□□ -1.81
HLA-DOAP06340 UBL5P2-201ENST00000583788 219 ntBASIC3.76□□□□□ -1.81
HLA-DOAP06340 AL451007.1-201ENST00000595491 289 ntBASIC3.76□□□□□ -1.81
HLA-DOAP06340 AC073539.2-201ENST00000597113 165 ntBASIC3.76□□□□□ -1.81
HLA-DOAP06340 AC002044.1-201ENST00000606707 158 ntBASIC3.76□□□□□ -1.81
HLA-DOAP06340 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DOAP06340 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DOAP06340 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DOAP06340 AL137003.2-201ENST00000606924 2538 ntBASIC3.76□□□□□ -1.81
HLA-DOAP06340 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DOAP06340 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DOAP06340 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DOAP06340 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
HLA-DOAP06340 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DOAP06340 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.75□□□□□ -1.81
HLA-DOAP06340 RNU6-1040P-201ENST00000383974 107 ntBASIC3.75□□□□□ -1.81
HLA-DOAP06340 RNU6-434P-201ENST00000384376 107 ntBASIC3.75□□□□□ -1.81
HLA-DOAP06340 RNU6-95P-201ENST00000384697 107 ntBASIC3.75□□□□□ -1.81
HLA-DOAP06340 RPL23AP48-201ENST00000406913 488 ntBASIC3.75□□□□□ -1.81
HLA-DOAP06340 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DOAP06340 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.75□□□□□ -1.81
HLA-DOAP06340 AL591212.2-201ENST00000433923 257 ntBASIC3.75□□□□□ -1.81
HLA-DOAP06340 HIGD1AP11-201ENST00000438361 280 ntBASIC3.75□□□□□ -1.81
HLA-DOAP06340 TXNP1-201ENST00000441872 371 ntBASIC3.75□□□□□ -1.81
HLA-DOAP06340 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.75□□□□□ -1.81
HLA-DOAP06340 MTND5P22-201ENST00000458380 195 ntBASIC3.75□□□□□ -1.81
HLA-DOAP06340 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DOAP06340 HSPE1P6-201ENST00000479457 291 ntBASIC3.75□□□□□ -1.81
HLA-DOAP06340 AC108860.1-201ENST00000484521 383 ntBASIC3.75□□□□□ -1.81
HLA-DOAP06340 AC079140.5-201ENST00000507882 310 ntBASIC3.75□□□□□ -1.81
HLA-DOAP06340 RN7SKP258-201ENST00000517151 304 ntBASIC3.75□□□□□ -1.81
HLA-DOAP06340 AC025423.5-201ENST00000550230 219 ntBASIC3.75□□□□□ -1.81
HLA-DOAP06340 MTCO3P23-201ENST00000561363 289 ntBASIC3.75□□□□□ -1.81
HLA-DOAP06340 MIR4680-201ENST00000580906 66 ntBASIC3.75□□□□□ -1.81
HLA-DOAP06340 MIR3941-201ENST00000582572 103 ntBASIC3.75□□□□□ -1.81
HLA-DOAP06340 CYP2C61P-201ENST00000604072 290 ntBASIC3.75□□□□□ -1.81
HLA-DOAP06340 MIR15A-201ENST00000607334 83 ntBASIC3.75□□□□□ -1.81
HLA-DOAP06340 AC010378.1-201ENST00000619270 362 ntBASIC3.75□□□□□ -1.81
HLA-DOAP06340 AL049641.1-201ENST00000441055 1948 ntBASIC3.75□□□□□ -1.81
HLA-DOAP06340 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.75□□□□□ -1.81
HLA-DOAP06340 AC004925.1-201ENST00000624256 2706 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms