Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
HLA-DPB1P04440 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
HLA-DPB1P04440 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
HLA-DPB1P04440 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.83□□□□□ -2.12
HLA-DPB1P04440 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
HLA-DPB1P04440 RNU6-166P-201ENST00000384371 107 ntBASIC1.83□□□□□ -2.12
HLA-DPB1P04440 MIR147B-201ENST00000390185 80 ntBASIC1.83□□□□□ -2.12
HLA-DPB1P04440 AL031577.2-201ENST00000404133 280 ntBASIC1.83□□□□□ -2.12
HLA-DPB1P04440 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.83□□□□□ -2.12
HLA-DPB1P04440 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.83□□□□□ -2.12
HLA-DPB1P04440 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.83□□□□□ -2.12
HLA-DPB1P04440 RPL23AP30-201ENST00000432419 501 ntBASIC1.83□□□□□ -2.12
HLA-DPB1P04440 AC119618.1-201ENST00000434191 222 ntBASIC1.83□□□□□ -2.12
HLA-DPB1P04440 FABP5P14-201ENST00000437273 393 ntBASIC1.83□□□□□ -2.12
HLA-DPB1P04440 RPS15AP9-201ENST00000439856 381 ntBASIC1.83□□□□□ -2.12
HLA-DPB1P04440 AL133217.1-201ENST00000450980 425 ntBASIC1.83□□□□□ -2.12
HLA-DPB1P04440 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.83□□□□□ -2.12
HLA-DPB1P04440 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.83□□□□□ -2.12
HLA-DPB1P04440 ART2BP-201ENST00000453501 499 ntBASIC1.83□□□□□ -2.12
HLA-DPB1P04440 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.83□□□□□ -2.12
HLA-DPB1P04440 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.83□□□□□ -2.12
HLA-DPB1P04440 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.83□□□□□ -2.12
HLA-DPB1P04440 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.83□□□□□ -2.12
HLA-DPB1P04440 ANXA2P1-201ENST00000505539 926 ntBASIC1.83□□□□□ -2.12
HLA-DPB1P04440 AC116655.1-201ENST00000508324 901 ntBASIC1.83□□□□□ -2.12
HLA-DPB1P04440 AC117522.2-201ENST00000510049 657 ntBASIC1.83□□□□□ -2.12
HLA-DPB1P04440 HMGB3P3-201ENST00000510526 400 ntBASIC1.83□□□□□ -2.12
HLA-DPB1P04440 ACA59.2-201ENST00000517061 156 ntBASIC1.83□□□□□ -2.12
HLA-DPB1P04440 SCARNA3-201ENST00000517097 143 ntBASIC1.83□□□□□ -2.12
HLA-DPB1P04440 Y_RNA.717-201ENST00000517106 92 ntBASIC1.83□□□□□ -2.12
HLA-DPB1P04440 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.83□□□□□ -2.12
HLA-DPB1P04440 SNRPGP18-201ENST00000553000 214 ntBASIC1.83□□□□□ -2.12
HLA-DPB1P04440 RPL21P5-201ENST00000554662 472 ntBASIC1.83□□□□□ -2.12
HLA-DPB1P04440 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.83□□□□□ -2.12
HLA-DPB1P04440 AC026464.5-201ENST00000562497 722 ntBASIC1.83□□□□□ -2.12
HLA-DPB1P04440 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.83□□□□□ -2.12
HLA-DPB1P04440 MIR4765-201ENST00000585007 77 ntBASIC1.83□□□□□ -2.12
HLA-DPB1P04440 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.83□□□□□ -2.12
HLA-DPB1P04440 AC092354.1-201ENST00000606057 376 ntBASIC1.83□□□□□ -2.12
HLA-DPB1P04440 AL451064.1-201ENST00000607718 471 ntBASIC1.83□□□□□ -2.12
HLA-DPB1P04440 AC010678.1-201ENST00000614118 713 ntBASIC1.83□□□□□ -2.12
HLA-DPB1P04440 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
HLA-DPB1P04440 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.83□□□□□ -2.12
HLA-DPB1P04440 AC004944.1-201ENST00000517807 3059 ntBASIC1.83□□□□□ -2.12
HLA-DPB1P04440 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
HLA-DPB1P04440 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.83□□□□□ -2.12
HLA-DPB1P04440 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.83□□□□□ -2.12
HLA-DPB1P04440 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
HLA-DPB1P04440 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
HLA-DPB1P04440 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
HLA-DPB1P04440 AL109809.4-201ENST00000603520 2185 ntBASIC1.82□□□□□ -2.12
HLA-DPB1P04440 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.82□□□□□ -2.12
HLA-DPB1P04440 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
HLA-DPB1P04440 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.82□□□□□ -2.12
HLA-DPB1P04440 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
HLA-DPB1P04440 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.82□□□□□ -2.12
HLA-DPB1P04440 Y_RNA.22-201ENST00000362492 102 ntBASIC1.82□□□□□ -2.12
HLA-DPB1P04440 SNORD3E-201ENST00000362899 217 ntBASIC1.82□□□□□ -2.12
HLA-DPB1P04440 RNA5SP125-201ENST00000364843 120 ntBASIC1.82□□□□□ -2.12
HLA-DPB1P04440 MIR301A-201ENST00000385261 86 ntBASIC1.82□□□□□ -2.12
HLA-DPB1P04440 AL023284.1-201ENST00000403956 276 ntBASIC1.82□□□□□ -2.12
HLA-DPB1P04440 AL133475.1-201ENST00000404414 305 ntBASIC1.82□□□□□ -2.12
HLA-DPB1P04440 RN7SKP32-201ENST00000410167 303 ntBASIC1.82□□□□□ -2.12
HLA-DPB1P04440 RNA5SP425-201ENST00000410336 112 ntBASIC1.82□□□□□ -2.12
HLA-DPB1P04440 RNU4-72P-201ENST00000410754 173 ntBASIC1.82□□□□□ -2.12
HLA-DPB1P04440 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.82□□□□□ -2.12
HLA-DPB1P04440 USP9YP6-201ENST00000413550 854 ntBASIC1.82□□□□□ -2.12
HLA-DPB1P04440 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.82□□□□□ -2.12
HLA-DPB1P04440 Z99497.1-201ENST00000421282 135 ntBASIC1.82□□□□□ -2.12
HLA-DPB1P04440 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.82□□□□□ -2.12
HLA-DPB1P04440 AL356320.1-201ENST00000429616 163 ntBASIC1.82□□□□□ -2.12
HLA-DPB1P04440 MTND5P25-201ENST00000430499 799 ntBASIC1.82□□□□□ -2.12
HLA-DPB1P04440 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.82□□□□□ -2.12
HLA-DPB1P04440 AL353705.4-201ENST00000449661 238 ntBASIC1.82□□□□□ -2.12
HLA-DPB1P04440 FABP5P13-201ENST00000452144 328 ntBASIC1.82□□□□□ -2.12
HLA-DPB1P04440 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.82□□□□□ -2.12
HLA-DPB1P04440 KLF3P2-201ENST00000465138 268 ntBASIC1.82□□□□□ -2.12
HLA-DPB1P04440 AC090515.1-201ENST00000465295 476 ntBASIC1.82□□□□□ -2.12
HLA-DPB1P04440 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.82□□□□□ -2.12
HLA-DPB1P04440 AC023194.1-201ENST00000493084 308 ntBASIC1.82□□□□□ -2.12
HLA-DPB1P04440 MTND4P2-201ENST00000507767 1203 ntBASIC1.82□□□□□ -2.12
HLA-DPB1P04440 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.82□□□□□ -2.12
HLA-DPB1P04440 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.82□□□□□ -2.12
HLA-DPB1P04440 FABP5P5-201ENST00000515537 406 ntBASIC1.82□□□□□ -2.12
HLA-DPB1P04440 AC106038.2-201ENST00000520706 568 ntBASIC1.82□□□□□ -2.12
HLA-DPB1P04440 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.82□□□□□ -2.12
HLA-DPB1P04440 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.82□□□□□ -2.12
HLA-DPB1P04440 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.82□□□□□ -2.12
HLA-DPB1P04440 AC091544.4-201ENST00000555268 342 ntBASIC1.82□□□□□ -2.12
HLA-DPB1P04440 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.82□□□□□ -2.12
HLA-DPB1P04440 MIR5571-201ENST00000577998 113 ntBASIC1.82□□□□□ -2.12
HLA-DPB1P04440 MIR3915-201ENST00000578518 97 ntBASIC1.82□□□□□ -2.12
HLA-DPB1P04440 MIR1273C-201ENST00000578669 77 ntBASIC1.82□□□□□ -2.12
HLA-DPB1P04440 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.82□□□□□ -2.12
HLA-DPB1P04440 AC009977.1-201ENST00000586015 570 ntBASIC1.82□□□□□ -2.12
HLA-DPB1P04440 AC126118.1-201ENST00000607744 628 ntBASIC1.82□□□□□ -2.12
HLA-DPB1P04440 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.82□□□□□ -2.12
HLA-DPB1P04440 AC091304.9-201ENST00000612091 226 ntBASIC1.82□□□□□ -2.12
HLA-DPB1P04440 AC122133.1-201ENST00000613964 233 ntBASIC1.82□□□□□ -2.12
HLA-DPB1P04440 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms