Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.78□□□□□ -2.12
CD74P04233 BZW1P2-201ENST00000473537 826 ntBASIC1.78□□□□□ -2.12
CD74P04233 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.78□□□□□ -2.12
CD74P04233 RPS3AP22-201ENST00000488297 769 ntBASIC1.78□□□□□ -2.12
CD74P04233 RPL39P36-201ENST00000490784 156 ntBASIC1.78□□□□□ -2.12
CD74P04233 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.78□□□□□ -2.12
CD74P04233 AC005178.1-201ENST00000508392 440 ntBASIC1.78□□□□□ -2.12
CD74P04233 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.78□□□□□ -2.12
CD74P04233 SCARNA16.3-201ENST00000516595 184 ntBASIC1.78□□□□□ -2.12
CD74P04233 RPL7P20-201ENST00000520308 745 ntBASIC1.78□□□□□ -2.12
CD74P04233 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.78□□□□□ -2.12
CD74P04233 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.78□□□□□ -2.12
CD74P04233 LRRC34P1-201ENST00000542742 915 ntBASIC1.78□□□□□ -2.12
CD74P04233 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.78□□□□□ -2.12
CD74P04233 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.78□□□□□ -2.12
CD74P04233 RPS3AP4-201ENST00000555161 764 ntBASIC1.78□□□□□ -2.12
CD74P04233 ANP32BP3-201ENST00000559213 706 ntBASIC1.78□□□□□ -2.12
CD74P04233 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.78□□□□□ -2.12
CD74P04233 MIR4529-201ENST00000578110 78 ntBASIC1.78□□□□□ -2.12
CD74P04233 MIR548AB-201ENST00000584917 84 ntBASIC1.78□□□□□ -2.12
CD74P04233 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.78□□□□□ -2.12
CD74P04233 WISP1-OT1-201ENST00000602893 642 ntBASIC1.78□□□□□ -2.12
CD74P04233 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.78□□□□□ -2.12
CD74P04233 FRG1KP-201ENST00000623592 341 ntBASIC1.78□□□□□ -2.12
CD74P04233 AC007494.3-201ENST00000624660 743 ntBASIC1.78□□□□□ -2.12
CD74P04233 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.77□□□□□ -2.13
CD74P04233 NACAP2-201ENST00000318548 624 ntBASIC1.77□□□□□ -2.13
CD74P04233 RNU6-486P-201ENST00000363116 107 ntBASIC1.77□□□□□ -2.13
CD74P04233 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.77□□□□□ -2.13
CD74P04233 MRPL42P2-201ENST00000403169 426 ntBASIC1.77□□□□□ -2.13
CD74P04233 Y_RNA.608-201ENST00000410647 95 ntBASIC1.77□□□□□ -2.13
CD74P04233 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.77□□□□□ -2.13
CD74P04233 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.77□□□□□ -2.13
CD74P04233 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.77□□□□□ -2.13
CD74P04233 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.77□□□□□ -2.13
CD74P04233 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.77□□□□□ -2.13
CD74P04233 AL109913.1-201ENST00000421173 514 ntBASIC1.77□□□□□ -2.13
CD74P04233 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.77□□□□□ -2.13
CD74P04233 UBE2D3P4-201ENST00000441973 436 ntBASIC1.77□□□□□ -2.13
CD74P04233 USP9YP12-201ENST00000450481 570 ntBASIC1.77□□□□□ -2.13
CD74P04233 AL133217.1-201ENST00000450980 425 ntBASIC1.77□□□□□ -2.13
CD74P04233 FABP5P13-201ENST00000452144 328 ntBASIC1.77□□□□□ -2.13
CD74P04233 RNU6-953P-201ENST00000459154 107 ntBASIC1.77□□□□□ -2.13
CD74P04233 AC055731.1-201ENST00000474387 401 ntBASIC1.77□□□□□ -2.13
CD74P04233 TRBV1-201ENST00000476502 284 ntBASIC1.77□□□□□ -2.13
CD74P04233 RN7SL636P-201ENST00000497504 294 ntBASIC1.77□□□□□ -2.13
CD74P04233 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.77□□□□□ -2.13
CD74P04233 AC010587.1-201ENST00000505809 469 ntBASIC1.77□□□□□ -2.13
CD74P04233 MRPS33P3-201ENST00000513456 322 ntBASIC1.77□□□□□ -2.13
CD74P04233 RNU6-581P-201ENST00000516214 105 ntBASIC1.77□□□□□ -2.13
CD74P04233 SNORA31.6-201ENST00000516241 130 ntBASIC1.77□□□□□ -2.13
CD74P04233 RNU2-10P-201ENST00000516375 211 ntBASIC1.77□□□□□ -2.13
CD74P04233 RNU6-1092P-201ENST00000516955 87 ntBASIC1.77□□□□□ -2.13
CD74P04233 RNA5SP337-201ENST00000517007 109 ntBASIC1.77□□□□□ -2.13
CD74P04233 OR5AQ1P-201ENST00000527596 927 ntBASIC1.77□□□□□ -2.13
CD74P04233 AC006199.1-201ENST00000548728 219 ntBASIC1.77□□□□□ -2.13
CD74P04233 MRPS36P5-201ENST00000551909 298 ntBASIC1.77□□□□□ -2.13
CD74P04233 AL121821.2-201ENST00000556081 394 ntBASIC1.77□□□□□ -2.13
CD74P04233 AC021739.1-201ENST00000559631 174 ntBASIC1.77□□□□□ -2.13
CD74P04233 AC109446.2-201ENST00000567872 497 ntBASIC1.77□□□□□ -2.13
CD74P04233 AC105245.1-201ENST00000581934 244 ntBASIC1.77□□□□□ -2.13
CD74P04233 AL355598.1-201ENST00000604169 202 ntBASIC1.77□□□□□ -2.13
CD74P04233 AL022161.1-201ENST00000604390 213 ntBASIC1.77□□□□□ -2.13
CD74P04233 AL031775.1-201ENST00000607014 887 ntBASIC1.77□□□□□ -2.13
CD74P04233 AC079248.2-201ENST00000623779 326 ntBASIC1.77□□□□□ -2.13
CD74P04233 MTND5P42-201ENST00000637720 498 ntBASIC1.77□□□□□ -2.13
CD74P04233 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.77□□□□□ -2.13
CD74P04233 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
CD74P04233 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.77□□□□□ -2.13
CD74P04233 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
CD74P04233 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.77□□□□□ -2.13
CD74P04233 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CD74P04233 RNU6-946P-201ENST00000383878 107 ntBASIC1.76□□□□□ -2.13
CD74P04233 MIR218-1-201ENST00000384999 110 ntBASIC1.76□□□□□ -2.13
CD74P04233 MIR676-201ENST00000390702 67 ntBASIC1.76□□□□□ -2.13
CD74P04233 RNU6-817P-201ENST00000391083 104 ntBASIC1.76□□□□□ -2.13
CD74P04233 SNORD115.1-201ENST00000391109 76 ntBASIC1.76□□□□□ -2.13
CD74P04233 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.76□□□□□ -2.13
CD74P04233 MTND4P20-201ENST00000424125 869 ntBASIC1.76□□□□□ -2.13
CD74P04233 AL589872.1-201ENST00000426602 288 ntBASIC1.76□□□□□ -2.13
CD74P04233 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.76□□□□□ -2.13
CD74P04233 HMGB3P12-201ENST00000438745 556 ntBASIC1.76□□□□□ -2.13
CD74P04233 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.76□□□□□ -2.13
CD74P04233 AL161651.1-201ENST00000440882 223 ntBASIC1.76□□□□□ -2.13
CD74P04233 MTND1P30-201ENST00000441241 901 ntBASIC1.76□□□□□ -2.13
CD74P04233 HMGN2P10-201ENST00000448085 265 ntBASIC1.76□□□□□ -2.13
CD74P04233 AC068781.1-201ENST00000488231 618 ntBASIC1.76□□□□□ -2.13
CD74P04233 RN7SL274P-201ENST00000492268 272 ntBASIC1.76□□□□□ -2.13
CD74P04233 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.76□□□□□ -2.13
CD74P04233 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.76□□□□□ -2.13
CD74P04233 AC008526.1-201ENST00000509149 338 ntBASIC1.76□□□□□ -2.13
CD74P04233 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.76□□□□□ -2.13
CD74P04233 Y_RNA.689-201ENST00000516589 107 ntBASIC1.76□□□□□ -2.13
CD74P04233 RNU2-19P-201ENST00000517288 84 ntBASIC1.76□□□□□ -2.13
CD74P04233 AP003122.3-201ENST00000526316 255 ntBASIC1.76□□□□□ -2.13
CD74P04233 AC011979.2-201ENST00000527568 352 ntBASIC1.76□□□□□ -2.13
CD74P04233 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.76□□□□□ -2.13
CD74P04233 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.76□□□□□ -2.13
CD74P04233 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.76□□□□□ -2.13
CD74P04233 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms