Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 U3.9-201ENST00000363823 204 ntBASIC0.08□□□□□ -2.4
APOBP04114 USP9YP26-201ENST00000421008 661 ntBASIC0.08□□□□□ -2.4
APOBP04114 USP9YP18-201ENST00000425912 695 ntBASIC0.08□□□□□ -2.4
APOBP04114 USP9YP24-201ENST00000434374 697 ntBASIC0.08□□□□□ -2.4
APOBP04114 USP9YP17-201ENST00000444617 696 ntBASIC0.08□□□□□ -2.4
APOBP04114 HSPE1P13-201ENST00000451143 297 ntBASIC0.08□□□□□ -2.4
APOBP04114 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.08□□□□□ -2.4
APOBP04114 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC0.08□□□□□ -2.4
APOBP04114 MIR548AX-201ENST00000580117 73 ntBASIC0.08□□□□□ -2.4
APOBP04114 RPL30P11-203ENST00000598995 310 ntBASIC0.08□□□□□ -2.4
APOBP04114 uc_338.14-201ENST00000613162 166 ntBASIC0.08□□□□□ -2.4
APOBP04114 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.08□□□□□ -2.4
APOBP04114 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
APOBP04114 SNORA9.1-201ENST00000362412 131 ntBASIC0.08□□□□□ -2.4
APOBP04114 SNORD3E-201ENST00000362899 217 ntBASIC0.08□□□□□ -2.4
APOBP04114 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.08□□□□□ -2.4
APOBP04114 snoU13.11-201ENST00000459219 104 ntBASIC0.08□□□□□ -2.4
APOBP04114 AC145146.1-201ENST00000496370 254 ntBASIC0.08□□□□□ -2.4
APOBP04114 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.08□□□□□ -2.4
APOBP04114 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.08□□□□□ -2.4
APOBP04114 MTCYBP22-201ENST00000603788 447 ntBASIC0.08□□□□□ -2.4
APOBP04114 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
APOBP04114 SNORD49B-201ENST00000365172 72 ntBASIC0.08□□□□□ -2.4
APOBP04114 RNU6-72P-201ENST00000384285 79 ntBASIC0.08□□□□□ -2.4
APOBP04114 RPS3AP36-201ENST00000398190 775 ntBASIC0.08□□□□□ -2.4
APOBP04114 RNU2-64P-201ENST00000411315 191 ntBASIC0.08□□□□□ -2.4
APOBP04114 EDDM3CP-201ENST00000415977 425 ntBASIC0.08□□□□□ -2.4
APOBP04114 EIF1P1-201ENST00000421436 341 ntBASIC0.08□□□□□ -2.4
APOBP04114 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.08□□□□□ -2.4
APOBP04114 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.08□□□□□ -2.4
APOBP04114 AC092757.1-201ENST00000467293 467 ntBASIC0.08□□□□□ -2.4
APOBP04114 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.08□□□□□ -2.4
APOBP04114 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.08□□□□□ -2.4
APOBP04114 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.08□□□□□ -2.4
APOBP04114 AC079791.1-201ENST00000605356 973 ntBASIC0.08□□□□□ -2.4
APOBP04114 AL365204.3-201ENST00000612448 685 ntBASIC0.08□□□□□ -2.4
APOBP04114 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.08□□□□□ -2.4
APOBP04114 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
APOBP04114 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
APOBP04114 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
APOBP04114 UBE2D3P2-201ENST00000424409 445 ntBASIC0.07□□□□□ -2.4
APOBP04114 HNRNPDLP3-201ENST00000456745 380 ntBASIC0.07□□□□□ -2.4
APOBP04114 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.07□□□□□ -2.4
APOBP04114 RPS26P45-201ENST00000471748 340 ntBASIC0.07□□□□□ -2.4
APOBP04114 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.07□□□□□ -2.4
APOBP04114 AP003049.1-201ENST00000529418 457 ntBASIC0.07□□□□□ -2.4
APOBP04114 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.07□□□□□ -2.4
APOBP04114 AC012435.1-202ENST00000568772 240 ntBASIC0.07□□□□□ -2.4
APOBP04114 AP001180.6-201ENST00000584918 159 ntBASIC0.07□□□□□ -2.4
APOBP04114 MIR4768-201ENST00000585270 74 ntBASIC0.07□□□□□ -2.4
APOBP04114 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.07□□□□□ -2.4
APOBP04114 AC084373.1-201ENST00000603311 235 ntBASIC0.07□□□□□ -2.4
APOBP04114 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.07□□□□□ -2.4
APOBP04114 GDI2P1-201ENST00000429312 1336 ntBASIC0.07□□□□□ -2.4
APOBP04114 SNORA32.3-201ENST00000384772 121 ntBASIC0.07□□□□□ -2.4
APOBP04114 RPS24P7-201ENST00000416921 246 ntBASIC0.07□□□□□ -2.4
APOBP04114 AC107953.1-201ENST00000522216 297 ntBASIC0.07□□□□□ -2.4
APOBP04114 AC026371.1-201ENST00000551867 419 ntBASIC0.07□□□□□ -2.4
APOBP04114 AC034236.3-201ENST00000605999 461 ntBASIC0.07□□□□□ -2.4
APOBP04114 AL590410.1-201ENST00000617925 333 ntBASIC0.07□□□□□ -2.4
APOBP04114 AC130454.1-201ENST00000622948 401 ntBASIC0.07□□□□□ -2.4
APOBP04114 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.07□□□□□ -2.4
APOBP04114 VPS26BP1-201ENST00000417155 755 ntBASIC0.07□□□□□ -2.4
APOBP04114 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC0.07□□□□□ -2.4
APOBP04114 AC107626.1-201ENST00000471084 183 ntBASIC0.07□□□□□ -2.4
APOBP04114 RPL22P13-201ENST00000493291 347 ntBASIC0.07□□□□□ -2.4
APOBP04114 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC0.07□□□□□ -2.4
APOBP04114 AP001893.2-201ENST00000526949 202 ntBASIC0.07□□□□□ -2.4
APOBP04114 MTND2P26-201ENST00000528255 1029 ntBASIC0.07□□□□□ -2.4
APOBP04114 AC090330.1-201ENST00000588646 764 ntBASIC0.07□□□□□ -2.4
APOBP04114 MIR5739-201ENST00000619803 80 ntBASIC0.07□□□□□ -2.4
APOBP04114 RNU6-748P-201ENST00000384648 107 ntBASIC0.06□□□□□ -2.4
APOBP04114 RNU6-220P-201ENST00000390919 107 ntBASIC0.06□□□□□ -2.4
APOBP04114 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.06□□□□□ -2.4
APOBP04114 RNA5SP57-201ENST00000459463 123 ntBASIC0.06□□□□□ -2.4
APOBP04114 AC025588.2-201ENST00000604851 466 ntBASIC0.06□□□□□ -2.4
APOBP04114 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
APOBP04114 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.06□□□□□ -2.4
APOBP04114 Y_RNA.185-201ENST00000363894 100 ntBASIC0.06□□□□□ -2.4
APOBP04114 CCNG1P1-201ENST00000406783 885 ntBASIC0.06□□□□□ -2.4
APOBP04114 MIR1295A-201ENST00000408463 79 ntBASIC0.06□□□□□ -2.4
APOBP04114 RNA5SP451-201ENST00000410588 110 ntBASIC0.06□□□□□ -2.4
APOBP04114 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.06□□□□□ -2.4
APOBP04114 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.06□□□□□ -2.4
APOBP04114 AL034418.1-201ENST00000448675 860 ntBASIC0.06□□□□□ -2.4
APOBP04114 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
APOBP04114 AL713866.2-201ENST00000603579 219 ntBASIC0.06□□□□□ -2.4
APOBP04114 AL355810.1-201ENST00000614629 552 ntBASIC0.06□□□□□ -2.4
APOBP04114 RPS3AP37-201ENST00000419176 745 ntBASIC0.06□□□□□ -2.4
APOBP04114 RNU7-27P-201ENST00000459281 62 ntBASIC0.06□□□□□ -2.4
APOBP04114 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.06□□□□□ -2.4
APOBP04114 AC012414.6-201ENST00000568241 401 ntBASIC0.06□□□□□ -2.4
APOBP04114 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC0.06□□□□□ -2.4
APOBP04114 MIR4645-201ENST00000583158 77 ntBASIC0.06□□□□□ -2.4
APOBP04114 MTCO2P2-201ENST00000591258 225 ntBASIC0.06□□□□□ -2.4
APOBP04114 RNU6-338P-201ENST00000383888 105 ntBASIC0.06□□□□□ -2.4
APOBP04114 MIR938-201ENST00000401216 83 ntBASIC0.06□□□□□ -2.4
APOBP04114 RNA5SP118-201ENST00000410385 109 ntBASIC0.06□□□□□ -2.4
APOBP04114 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC0.06□□□□□ -2.4
APOBP04114 BPY2DP-201ENST00000422208 265 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms