Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.27□□□□□ -2.21
COL4A1P02462 MIR3616-201ENST00000584070 92 ntBASIC1.27□□□□□ -2.21
COL4A1P02462 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.27□□□□□ -2.21
COL4A1P02462 MTND3P19-201ENST00000603825 345 ntBASIC1.27□□□□□ -2.21
COL4A1P02462 MIR98-201ENST00000606724 119 ntBASIC1.27□□□□□ -2.21
COL4A1P02462 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.27□□□□□ -2.21
COL4A1P02462 AC009974.1-201ENST00000608881 455 ntBASIC1.27□□□□□ -2.21
COL4A1P02462 AC108706.1-201ENST00000611053 297 ntBASIC1.27□□□□□ -2.21
COL4A1P02462 AC010133.1-201ENST00000615809 842 ntBASIC1.27□□□□□ -2.21
COL4A1P02462 AC008443.7-201ENST00000622195 246 ntBASIC1.27□□□□□ -2.21
COL4A1P02462 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.27□□□□□ -2.21
COL4A1P02462 RNU6-343P-201ENST00000364709 104 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 RNU6-637P-201ENST00000384050 107 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.26□□□□□ -2.21
COL4A1P02462 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.26□□□□□ -2.21
COL4A1P02462 AL953862.1-201ENST00000423016 168 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.26□□□□□ -2.21
COL4A1P02462 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.26□□□□□ -2.21
COL4A1P02462 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.26□□□□□ -2.21
COL4A1P02462 COX7BP2-201ENST00000437976 242 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 AL121601.2-201ENST00000438019 707 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.26□□□□□ -2.21
COL4A1P02462 AL714022.1-201ENST00000439897 151 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.26□□□□□ -2.21
COL4A1P02462 RNU7-26P-201ENST00000458980 63 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 AL049714.1-201ENST00000466686 347 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 AC116337.2-201ENST00000477662 156 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 RNU6-1256P-201ENST00000516539 103 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 RNU6-113P-201ENST00000516653 101 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 AC087854.1-201ENST00000519706 414 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 DEFB108E-201ENST00000524692 240 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.26□□□□□ -2.21
COL4A1P02462 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.26□□□□□ -2.21
COL4A1P02462 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.26□□□□□ -2.21
COL4A1P02462 MIR3117-201ENST00000584034 78 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.26□□□□□ -2.21
COL4A1P02462 AL161729.4-201ENST00000604650 476 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 AL355472.4-201ENST00000610233 626 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.26□□□□□ -2.21
COL4A1P02462 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.26□□□□□ -2.21
COL4A1P02462 PCMTD1P7-201ENST00000634506 357 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 OR5H6-203ENST00000642105 978 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 DDX43P2-201ENST00000604753 1354 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 AL049641.1-201ENST00000441055 1948 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 AC087359.1-201ENST00000508335 1740 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 AP000776.1-201ENST00000530032 1663 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
COL4A1P02462 RNU6-198P-201ENST00000384258 104 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 RNU6-906P-201ENST00000384700 70 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 RNU6-1176P-201ENST00000390955 107 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 RNU6-516P-201ENST00000411381 104 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 AL356379.1-201ENST00000414105 126 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 AC005534.2-201ENST00000431047 433 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 TAAR7P-201ENST00000436141 242 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 PAXBP1P1-201ENST00000449315 447 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.26□□□□□ -2.21
COL4A1P02462 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.26□□□□□ -2.21
COL4A1P02462 MTND2P24-201ENST00000453434 806 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 AL583843.1-201ENST00000456070 346 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 RNU7-59P-201ENST00000459101 61 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.26□□□□□ -2.21
COL4A1P02462 LARP1BP2-201ENST00000486594 519 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 HMGB3P17-201ENST00000504195 649 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.26□□□□□ -2.21
COL4A1P02462 CBX3P8-201ENST00000532412 525 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 CBX3P7-201ENST00000532876 502 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.26□□□□□ -2.21
COL4A1P02462 AC124947.2-202ENST00000552735 133 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 AL132857.1-201ENST00000555180 708 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 AL357094.1-201ENST00000603845 844 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 AL139022.2-201ENST00000606934 443 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 AP000254.1-201ENST00000609934 520 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 PART1_2.1-201ENST00000612397 250 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 SDR42E1P2-201ENST00000614861 481 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.26□□□□□ -2.21
COL4A1P02462 AC006386.1-201ENST00000619436 415 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 SDR42E1P4-201ENST00000620894 481 ntBASIC1.26□□□□□ -2.21
COL4A1P02462 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.26□□□□□ -2.21
COL4A1P02462 AL138713.1-201ENST00000624026 2130 ntBASIC1.25□□□□□ -2.21
COL4A1P02462 RBBP8P1-201ENST00000449447 1844 ntBASIC1.25□□□□□ -2.21
COL4A1P02462 AC080100.1-201ENST00000624239 5356 ntBASIC1.25□□□□□ -2.21
COL4A1P02462 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.25□□□□□ -2.21
COL4A1P02462 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
COL4A1P02462 RNU6-462P-201ENST00000362659 105 ntBASIC1.25□□□□□ -2.21
COL4A1P02462 RNU6-97P-201ENST00000363387 104 ntBASIC1.25□□□□□ -2.21
COL4A1P02462 MIR514A1-201ENST00000385133 98 ntBASIC1.25□□□□□ -2.21
COL4A1P02462 RNU1-139P-201ENST00000391307 165 ntBASIC1.25□□□□□ -2.21
COL4A1P02462 AC119751.3-201ENST00000399720 670 ntBASIC1.25□□□□□ -2.21
COL4A1P02462 MIR1290-201ENST00000408735 78 ntBASIC1.25□□□□□ -2.21
COL4A1P02462 AC083875.1-201ENST00000419509 405 ntBASIC1.25□□□□□ -2.21
COL4A1P02462 AC099548.1-201ENST00000421443 426 ntBASIC1.25□□□□□ -2.21
COL4A1P02462 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.25□□□□□ -2.21
COL4A1P02462 ELOCP30-201ENST00000447108 299 ntBASIC1.25□□□□□ -2.21
COL4A1P02462 MTCO1P27-201ENST00000448269 226 ntBASIC1.25□□□□□ -2.21
COL4A1P02462 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.25□□□□□ -2.21
COL4A1P02462 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.25□□□□□ -2.21
COL4A1P02462 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.25□□□□□ -2.21
COL4A1P02462 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.25□□□□□ -2.21
COL4A1P02462 RNU6-150P-201ENST00000516237 95 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms