Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.69□□□□□ -2.14
HLA-DQA1P01909 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.69□□□□□ -2.14
HLA-DQA1P01909 BX276092.3-201ENST00000424182 230 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.69□□□□□ -2.14
HLA-DQA1P01909 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.69□□□□□ -2.14
HLA-DQA1P01909 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.69□□□□□ -2.14
HLA-DQA1P01909 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.69□□□□□ -2.14
HLA-DQA1P01909 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.69□□□□□ -2.14
HLA-DQA1P01909 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.69□□□□□ -2.14
HLA-DQA1P01909 EEF1B2P7-201ENST00000451177 676 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 AL021397.1-201ENST00000451806 248 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.69□□□□□ -2.14
HLA-DQA1P01909 AL139109.1-201ENST00000455491 297 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 BTF3P15-201ENST00000455606 336 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 AL583843.1-201ENST00000456070 346 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 snoU109.2-201ENST00000459316 135 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.69□□□□□ -2.14
HLA-DQA1P01909 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.69□□□□□ -2.14
HLA-DQA1P01909 AC008413.1-201ENST00000511864 177 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 SCARNA24.1-201ENST00000516465 137 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.69□□□□□ -2.14
HLA-DQA1P01909 ADI1P3-201ENST00000549509 470 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 RPS3AP23-202ENST00000574601 686 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 MIR4448-201ENST00000584360 86 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 AC007621.1-201ENST00000604544 437 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 AL121992.2-201ENST00000606262 256 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 AC012409.4-201ENST00000612923 249 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 AL359547.2-201ENST00000615810 418 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 AL603755.1-201ENST00000619504 163 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.69□□□□□ -2.14
HLA-DQA1P01909 uc_338.20-201ENST00000621563 178 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 AC091931.1-201ENST00000623488 728 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 MIR1291-201ENST00000627649 87 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 MIR7157-201ENST00000635801 60 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
HLA-DQA1P01909 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
HLA-DQA1P01909 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.69□□□□□ -2.14
HLA-DQA1P01909 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.69□□□□□ -2.14
HLA-DQA1P01909 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.69□□□□□ -2.14
HLA-DQA1P01909 AC069528.2-201ENST00000624849 1991 ntBASIC1.68□□□□□ -2.14
HLA-DQA1P01909 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
HLA-DQA1P01909 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.68□□□□□ -2.14
HLA-DQA1P01909 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.68□□□□□ -2.14
HLA-DQA1P01909 RNU6-395P-201ENST00000365662 106 ntBASIC1.68□□□□□ -2.14
HLA-DQA1P01909 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HLA-DQA1P01909 RNU6-641P-201ENST00000384006 107 ntBASIC1.68□□□□□ -2.14
HLA-DQA1P01909 RNU6-748P-201ENST00000384648 107 ntBASIC1.68□□□□□ -2.14
HLA-DQA1P01909 U3.40-201ENST00000408706 208 ntBASIC1.68□□□□□ -2.14
HLA-DQA1P01909 RNA5SP338-201ENST00000410495 85 ntBASIC1.68□□□□□ -2.14
HLA-DQA1P01909 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.68□□□□□ -2.14
HLA-DQA1P01909 CYCSP48-201ENST00000417124 323 ntBASIC1.68□□□□□ -2.14
HLA-DQA1P01909 MTND2P18-201ENST00000419962 1030 ntBASIC1.68□□□□□ -2.14
HLA-DQA1P01909 NUP35P1-201ENST00000422734 947 ntBASIC1.68□□□□□ -2.14
HLA-DQA1P01909 AL160275.3-201ENST00000423876 471 ntBASIC1.68□□□□□ -2.14
HLA-DQA1P01909 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.68□□□□□ -2.14
HLA-DQA1P01909 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.68□□□□□ -2.14
HLA-DQA1P01909 MTATP6P16-201ENST00000434543 526 ntBASIC1.68□□□□□ -2.14
HLA-DQA1P01909 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.68□□□□□ -2.14
HLA-DQA1P01909 RPS24P1-201ENST00000438550 371 ntBASIC1.68□□□□□ -2.14
HLA-DQA1P01909 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.68□□□□□ -2.14
HLA-DQA1P01909 AL022238.1-201ENST00000442557 355 ntBASIC1.68□□□□□ -2.14
HLA-DQA1P01909 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.68□□□□□ -2.14
HLA-DQA1P01909 RPL23AP7-203ENST00000449021 469 ntBASIC1.68□□□□□ -2.14
HLA-DQA1P01909 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.68□□□□□ -2.14
HLA-DQA1P01909 RPL36AP48-201ENST00000485521 314 ntBASIC1.68□□□□□ -2.14
HLA-DQA1P01909 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.68□□□□□ -2.14
HLA-DQA1P01909 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.68□□□□□ -2.14
HLA-DQA1P01909 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.68□□□□□ -2.14
HLA-DQA1P01909 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.68□□□□□ -2.14
HLA-DQA1P01909 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.68□□□□□ -2.14
HLA-DQA1P01909 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.68□□□□□ -2.14
HLA-DQA1P01909 SMURF2P1-201ENST00000514992 481 ntBASIC1.68□□□□□ -2.14
HLA-DQA1P01909 RN7SKP24-201ENST00000515888 284 ntBASIC1.68□□□□□ -2.14
HLA-DQA1P01909 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.68□□□□□ -2.14
HLA-DQA1P01909 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.68□□□□□ -2.14
HLA-DQA1P01909 ANP32BP3-201ENST00000559213 706 ntBASIC1.68□□□□□ -2.14
HLA-DQA1P01909 AC092325.1-201ENST00000566449 554 ntBASIC1.68□□□□□ -2.14
HLA-DQA1P01909 AC145350.1-201ENST00000567426 208 ntBASIC1.68□□□□□ -2.14
HLA-DQA1P01909 AC012414.6-201ENST00000568241 401 ntBASIC1.68□□□□□ -2.14
HLA-DQA1P01909 MIR3935-201ENST00000583472 104 ntBASIC1.68□□□□□ -2.14
HLA-DQA1P01909 AC008521.1-201ENST00000587471 187 ntBASIC1.68□□□□□ -2.14
HLA-DQA1P01909 AL022154.1-201ENST00000604698 785 ntBASIC1.68□□□□□ -2.14
HLA-DQA1P01909 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.68□□□□□ -2.14
HLA-DQA1P01909 AC069294.1-201ENST00000608397 350 ntBASIC1.68□□□□□ -2.14
HLA-DQA1P01909 AC008250.2-201ENST00000615261 205 ntBASIC1.68□□□□□ -2.14
HLA-DQA1P01909 DUXAP9-208ENST00000622815 614 ntBASIC1.68□□□□□ -2.14
HLA-DQA1P01909 AP003485.2-201ENST00000623636 610 ntBASIC1.68□□□□□ -2.14
HLA-DQA1P01909 AP000770.2-201ENST00000623694 100 ntBASIC1.68□□□□□ -2.14
HLA-DQA1P01909 AC012640.5-201ENST00000623897 319 ntBASIC1.68□□□□□ -2.14
HLA-DQA1P01909 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.68□□□□□ -2.14
HLA-DQA1P01909 MTND5P30-201ENST00000452896 1731 ntBASIC1.68□□□□□ -2.14
HLA-DQA1P01909 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
HLA-DQA1P01909 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.68□□□□□ -2.14
HLA-DQA1P01909 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.68□□□□□ -2.14
HLA-DQA1P01909 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HLA-DQA1P01909 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
HLA-DQA1P01909 Z75746.1-201ENST00000440243 2080 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
HLA-DQA1P01909 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms