Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.5□□□□□ -2.17
CPSF4O95639 ZNF519P3-201ENST00000557158 1032 ntBASIC1.5□□□□□ -2.17
CPSF4O95639 MIR4513-201ENST00000581077 86 ntBASIC1.5□□□□□ -2.17
CPSF4O95639 AP000240.1-201ENST00000609910 452 ntBASIC1.5□□□□□ -2.17
CPSF4O95639 AC011939.3-201ENST00000613686 466 ntBASIC1.5□□□□□ -2.17
CPSF4O95639 AC006338.1-201ENST00000618453 749 ntBASIC1.5□□□□□ -2.17
CPSF4O95639 AP002791.1-201ENST00000623291 381 ntBASIC1.5□□□□□ -2.17
CPSF4O95639 PISRT1-201ENST00000626175 531 ntBASIC1.5□□□□□ -2.17
CPSF4O95639 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.5□□□□□ -2.17
CPSF4O95639 U6.99-201ENST00000637524 83 ntBASIC1.5□□□□□ -2.17
CPSF4O95639 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.5□□□□□ -2.17
CPSF4O95639 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.5□□□□□ -2.17
CPSF4O95639 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CPSF4O95639 AC092104.1-201ENST00000497346 1441 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 AC131280.1-202ENST00000624067 4211 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CPSF4O95639 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CPSF4O95639 SNORA16B-201ENST00000364674 135 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 SNORA72.3-201ENST00000365074 132 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 SMIM11P1-201ENST00000369586 178 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 SNORA46.1-201ENST00000391069 153 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 AL627390.1-201ENST00000396055 340 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 POLHP1-201ENST00000411806 470 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 OR51A5P-201ENST00000415429 942 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.49□□□□□ -2.17
CPSF4O95639 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.49□□□□□ -2.17
CPSF4O95639 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.49□□□□□ -2.17
CPSF4O95639 MICF-203ENST00000432679 129 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 RPL22P17-201ENST00000438729 315 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 AC118469.1-201ENST00000442943 488 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 RPL32P28-201ENST00000443577 397 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.49□□□□□ -2.17
CPSF4O95639 SNORD97-201ENST00000459187 142 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 KLF3P2-201ENST00000465138 268 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.49□□□□□ -2.17
CPSF4O95639 MTND2P14-201ENST00000482139 351 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 MTND1P3-201ENST00000484956 952 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 AC026801.1-201ENST00000497178 464 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.49□□□□□ -2.17
CPSF4O95639 RPL23AP94-201ENST00000512518 302 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.49□□□□□ -2.17
CPSF4O95639 SNORA25.15-201ENST00000516487 89 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 RNU7-193P-201ENST00000516723 65 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 RNU6-678P-201ENST00000516832 109 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 AC009902.1-201ENST00000519351 183 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.49□□□□□ -2.17
CPSF4O95639 MTND4LP18-201ENST00000526864 291 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.49□□□□□ -2.17
CPSF4O95639 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.49□□□□□ -2.17
CPSF4O95639 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.49□□□□□ -2.17
CPSF4O95639 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.49□□□□□ -2.17
CPSF4O95639 AC091489.2-201ENST00000566263 604 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 ROCK1P1-201ENST00000573767 549 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 MIR3118-1-201ENST00000581787 76 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 AC010928.2-201ENST00000588017 287 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 AC011494.1-201ENST00000596454 237 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 AC008751.2-201ENST00000597885 980 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.49□□□□□ -2.17
CPSF4O95639 BNIP3P9-201ENST00000603714 553 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 AL670379.6-201ENST00000603753 252 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 AL670379.11-201ENST00000604059 253 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 AC104763.2-201ENST00000604179 382 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 AC008162.1-201ENST00000604718 254 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 AL670379.1-201ENST00000604752 252 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 AL670379.5-201ENST00000605253 252 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 AL670379.12-201ENST00000605291 253 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 AL670379.8-201ENST00000605353 252 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 AL021997.1-201ENST00000605757 193 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 AL670379.7-201ENST00000605823 252 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 uc_338.5-201ENST00000611839 155 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 AC091953.2-201ENST00000623979 160 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 Z99571.1-201ENST00000636677 394 ntBASIC1.49□□□□□ -2.17
CPSF4O95639 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CPSF4O95639 RNU5E-6P-201ENST00000365574 115 ntBASIC1.48□□□□□ -2.17
CPSF4O95639 RNU6-19P-201ENST00000384718 107 ntBASIC1.48□□□□□ -2.17
CPSF4O95639 MIR1304-201ENST00000408243 91 ntBASIC1.48□□□□□ -2.17
CPSF4O95639 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.48□□□□□ -2.17
CPSF4O95639 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.48□□□□□ -2.17
CPSF4O95639 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.48□□□□□ -2.17
CPSF4O95639 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.48□□□□□ -2.17
CPSF4O95639 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.48□□□□□ -2.17
CPSF4O95639 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.48□□□□□ -2.17
CPSF4O95639 HMGB3P12-201ENST00000438745 556 ntBASIC1.48□□□□□ -2.17
CPSF4O95639 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.48□□□□□ -2.17
CPSF4O95639 BRK1P2-201ENST00000442875 223 ntBASIC1.48□□□□□ -2.17
CPSF4O95639 AC092001.1-201ENST00000453012 261 ntBASIC1.48□□□□□ -2.17
CPSF4O95639 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.48□□□□□ -2.17
CPSF4O95639 RNU6-953P-201ENST00000459154 107 ntBASIC1.48□□□□□ -2.17
CPSF4O95639 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.48□□□□□ -2.17
CPSF4O95639 RNU6-143P-201ENST00000516942 93 ntBASIC1.48□□□□□ -2.17
CPSF4O95639 SCARNA3-201ENST00000517097 143 ntBASIC1.48□□□□□ -2.17
CPSF4O95639 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
CPSF4O95639 AP005902.1-201ENST00000521358 186 ntBASIC1.48□□□□□ -2.17
CPSF4O95639 AC010186.2-204ENST00000537668 439 ntBASIC1.48□□□□□ -2.17
CPSF4O95639 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.48□□□□□ -2.17
CPSF4O95639 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.48□□□□□ -2.17
CPSF4O95639 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.48□□□□□ -2.17
CPSF4O95639 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.48□□□□□ -2.17
CPSF4O95639 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.48□□□□□ -2.17
CPSF4O95639 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms