Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 MIR676-201ENST00000390702 67 ntBASIC0.73□□□□□ -2.29
ABCA1O95477 RN7SKP200-201ENST00000410564 320 ntBASIC0.73□□□□□ -2.29
ABCA1O95477 AL592310.1-201ENST00000414330 671 ntBASIC0.73□□□□□ -2.29
ABCA1O95477 RPL30P13-201ENST00000418873 348 ntBASIC0.73□□□□□ -2.29
ABCA1O95477 CR848007.2-201ENST00000424918 787 ntBASIC0.73□□□□□ -2.29
ABCA1O95477 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC0.73□□□□□ -2.29
ABCA1O95477 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.73□□□□□ -2.29
ABCA1O95477 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.73□□□□□ -2.29
ABCA1O95477 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.73□□□□□ -2.29
ABCA1O95477 AL096803.2-201ENST00000450032 677 ntBASIC0.73□□□□□ -2.29
ABCA1O95477 RPL23AP35-201ENST00000451906 501 ntBASIC0.73□□□□□ -2.29
ABCA1O95477 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.73□□□□□ -2.29
ABCA1O95477 SNORA4.4-201ENST00000515921 135 ntBASIC0.73□□□□□ -2.29
ABCA1O95477 RNU6-970P-201ENST00000516312 107 ntBASIC0.73□□□□□ -2.29
ABCA1O95477 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC0.73□□□□□ -2.29
ABCA1O95477 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.73□□□□□ -2.29
ABCA1O95477 NACAP3-201ENST00000552100 481 ntBASIC0.73□□□□□ -2.29
ABCA1O95477 AP003973.1-201ENST00000604639 691 ntBASIC0.73□□□□□ -2.29
ABCA1O95477 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
ABCA1O95477 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
ABCA1O95477 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
ABCA1O95477 RNA5SP276-201ENST00000362580 94 ntBASIC0.73□□□□□ -2.29
ABCA1O95477 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.73□□□□□ -2.29
ABCA1O95477 AC007435.1-201ENST00000421086 415 ntBASIC0.73□□□□□ -2.29
ABCA1O95477 USP9YP18-201ENST00000425912 695 ntBASIC0.73□□□□□ -2.29
ABCA1O95477 AL512844.2-201ENST00000433990 593 ntBASIC0.73□□□□□ -2.29
ABCA1O95477 USP9YP24-201ENST00000434374 697 ntBASIC0.73□□□□□ -2.29
ABCA1O95477 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.73□□□□□ -2.29
ABCA1O95477 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.73□□□□□ -2.29
ABCA1O95477 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.73□□□□□ -2.29
ABCA1O95477 RPL23AP6-201ENST00000446637 472 ntBASIC0.73□□□□□ -2.29
ABCA1O95477 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.73□□□□□ -2.29
ABCA1O95477 RPS27P1-201ENST00000450552 247 ntBASIC0.73□□□□□ -2.29
ABCA1O95477 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.73□□□□□ -2.29
ABCA1O95477 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.73□□□□□ -2.29
ABCA1O95477 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
ABCA1O95477 RNA5SP137-201ENST00000516833 135 ntBASIC0.73□□□□□ -2.29
ABCA1O95477 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.73□□□□□ -2.29
ABCA1O95477 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC0.73□□□□□ -2.29
ABCA1O95477 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.73□□□□□ -2.29
ABCA1O95477 AL356432.3-201ENST00000568952 465 ntBASIC0.73□□□□□ -2.29
ABCA1O95477 ADAM3B-201ENST00000569937 840 ntBASIC0.73□□□□□ -2.29
ABCA1O95477 AL512605.2-201ENST00000592972 256 ntBASIC0.73□□□□□ -2.29
ABCA1O95477 SNRPGP17-201ENST00000603780 214 ntBASIC0.73□□□□□ -2.29
ABCA1O95477 MTCYBP22-201ENST00000603788 447 ntBASIC0.73□□□□□ -2.29
ABCA1O95477 AL050343.2-201ENST00000607338 280 ntBASIC0.73□□□□□ -2.29
ABCA1O95477 MTND5P11-201ENST00000511037 1812 ntBASIC0.72□□□□□ -2.29
ABCA1O95477 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
ABCA1O95477 SNORA27.3-201ENST00000364937 134 ntBASIC0.72□□□□□ -2.29
ABCA1O95477 MIR936-201ENST00000401264 98 ntBASIC0.72□□□□□ -2.29
ABCA1O95477 AC127391.1-201ENST00000411737 98 ntBASIC0.72□□□□□ -2.29
ABCA1O95477 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
ABCA1O95477 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.72□□□□□ -2.29
ABCA1O95477 MTCO3P5-201ENST00000433620 714 ntBASIC0.72□□□□□ -2.29
ABCA1O95477 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC0.72□□□□□ -2.29
ABCA1O95477 AC112198.4-201ENST00000515450 351 ntBASIC0.72□□□□□ -2.29
ABCA1O95477 DEFB108E-201ENST00000524692 240 ntBASIC0.72□□□□□ -2.29
ABCA1O95477 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.72□□□□□ -2.29
ABCA1O95477 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.72□□□□□ -2.29
ABCA1O95477 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
ABCA1O95477 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
ABCA1O95477 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.72□□□□□ -2.29
ABCA1O95477 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.72□□□□□ -2.29
ABCA1O95477 MTND4P24-201ENST00000424002 397 ntBASIC0.72□□□□□ -2.29
ABCA1O95477 AC007742.1-201ENST00000425789 329 ntBASIC0.72□□□□□ -2.29
ABCA1O95477 RPL31P35-201ENST00000431058 377 ntBASIC0.72□□□□□ -2.29
ABCA1O95477 MTND2P5-201ENST00000432656 1006 ntBASIC0.72□□□□□ -2.29
ABCA1O95477 AC015922.2-201ENST00000435593 184 ntBASIC0.72□□□□□ -2.29
ABCA1O95477 ELOCP26-201ENST00000436067 329 ntBASIC0.72□□□□□ -2.29
ABCA1O95477 DDX3P2-201ENST00000446138 111 ntBASIC0.72□□□□□ -2.29
ABCA1O95477 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.72□□□□□ -2.29
ABCA1O95477 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.72□□□□□ -2.29
ABCA1O95477 AC112771.1-201ENST00000463581 102 ntBASIC0.72□□□□□ -2.29
ABCA1O95477 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.72□□□□□ -2.29
ABCA1O95477 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
ABCA1O95477 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC0.72□□□□□ -2.29
ABCA1O95477 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.72□□□□□ -2.29
ABCA1O95477 AC093519.1-201ENST00000566109 298 ntBASIC0.72□□□□□ -2.29
ABCA1O95477 LARP7P2-201ENST00000575306 125 ntBASIC0.72□□□□□ -2.29
ABCA1O95477 MIR4637-201ENST00000582405 84 ntBASIC0.72□□□□□ -2.29
ABCA1O95477 AC004853.1-201ENST00000604902 698 ntBASIC0.72□□□□□ -2.29
ABCA1O95477 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.72□□□□□ -2.29
ABCA1O95477 MIR6835-201ENST00000621552 64 ntBASIC0.72□□□□□ -2.29
ABCA1O95477 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.72□□□□□ -2.29
ABCA1O95477 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.72□□□□□ -2.29
ABCA1O95477 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
ABCA1O95477 AL390862.1-201ENST00000635467 1469 ntBASIC0.71□□□□□ -2.3
ABCA1O95477 SGO1P1-201ENST00000603525 1447 ntBASIC0.71□□□□□ -2.3
ABCA1O95477 RNU6-486P-201ENST00000363116 107 ntBASIC0.71□□□□□ -2.3
ABCA1O95477 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.71□□□□□ -2.3
ABCA1O95477 AC093422.3-201ENST00000428506 305 ntBASIC0.71□□□□□ -2.3
ABCA1O95477 MED14P1-201ENST00000430517 648 ntBASIC0.71□□□□□ -2.3
ABCA1O95477 AC018437.1-201ENST00000492214 406 ntBASIC0.71□□□□□ -2.3
ABCA1O95477 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.71□□□□□ -2.3
ABCA1O95477 AC103833.1-201ENST00000517442 172 ntBASIC0.71□□□□□ -2.3
ABCA1O95477 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.71□□□□□ -2.3
ABCA1O95477 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.71□□□□□ -2.3
ABCA1O95477 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.71□□□□□ -2.3
ABCA1O95477 BNIP3P23-201ENST00000599655 511 ntBASIC0.71□□□□□ -2.3
ABCA1O95477 AC243960.4-201ENST00000600532 288 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms