Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 FABP5P5-201ENST00000515537 406 ntBASIC2□□□□□ -2.09
CTDNEP1O95476 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2□□□□□ -2.09
CTDNEP1O95476 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2□□□□□ -2.09
CTDNEP1O95476 AP006587.4-201ENST00000526053 529 ntBASIC2□□□□□ -2.09
CTDNEP1O95476 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
CTDNEP1O95476 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2□□□□□ -2.09
CTDNEP1O95476 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2□□□□□ -2.09
CTDNEP1O95476 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2□□□□□ -2.09
CTDNEP1O95476 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2□□□□□ -2.09
CTDNEP1O95476 AC007375.1-201ENST00000554513 578 ntBASIC2□□□□□ -2.09
CTDNEP1O95476 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2□□□□□ -2.09
CTDNEP1O95476 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2□□□□□ -2.09
CTDNEP1O95476 AC112191.3-201ENST00000604371 277 ntBASIC2□□□□□ -2.09
CTDNEP1O95476 AC239868.4-201ENST00000608318 671 ntBASIC2□□□□□ -2.09
CTDNEP1O95476 MIR8081-201ENST00000611533 95 ntBASIC2□□□□□ -2.09
CTDNEP1O95476 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2□□□□□ -2.09
CTDNEP1O95476 RN7SL853P-201ENST00000617250 223 ntBASIC2□□□□□ -2.09
CTDNEP1O95476 AC005858.4-201ENST00000623191 700 ntBASIC2□□□□□ -2.09
CTDNEP1O95476 AL603839.4-201ENST00000624658 1005 ntBASIC2□□□□□ -2.09
CTDNEP1O95476 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2□□□□□ -2.09
CTDNEP1O95476 AC010329.5-201ENST00000623497 2174 ntBASIC2□□□□□ -2.09
CTDNEP1O95476 AC092104.1-201ENST00000497346 1441 ntBASIC2□□□□□ -2.09
CTDNEP1O95476 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.99□□□□□ -2.09
CTDNEP1O95476 RNU5F-7P-201ENST00000363696 115 ntBASIC1.99□□□□□ -2.09
CTDNEP1O95476 SNORA3A-201ENST00000364113 130 ntBASIC1.99□□□□□ -2.09
CTDNEP1O95476 RNU6-741P-201ENST00000383889 107 ntBASIC1.99□□□□□ -2.09
CTDNEP1O95476 SNORD23.1-201ENST00000408212 104 ntBASIC1.99□□□□□ -2.09
CTDNEP1O95476 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.99□□□□□ -2.09
CTDNEP1O95476 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.99□□□□□ -2.09
CTDNEP1O95476 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.99□□□□□ -2.09
CTDNEP1O95476 BX276092.3-201ENST00000424182 230 ntBASIC1.99□□□□□ -2.09
CTDNEP1O95476 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.99□□□□□ -2.09
CTDNEP1O95476 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.99□□□□□ -2.09
CTDNEP1O95476 MED14P1-201ENST00000430517 648 ntBASIC1.99□□□□□ -2.09
CTDNEP1O95476 HMGN2P3-201ENST00000433603 273 ntBASIC1.99□□□□□ -2.09
CTDNEP1O95476 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.99□□□□□ -2.09
CTDNEP1O95476 HMGN2P5-201ENST00000436882 273 ntBASIC1.99□□□□□ -2.09
CTDNEP1O95476 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.99□□□□□ -2.09
CTDNEP1O95476 AL022238.1-201ENST00000442557 355 ntBASIC1.99□□□□□ -2.09
CTDNEP1O95476 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.99□□□□□ -2.09
CTDNEP1O95476 USP9YP12-201ENST00000450481 570 ntBASIC1.99□□□□□ -2.09
CTDNEP1O95476 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.99□□□□□ -2.09
CTDNEP1O95476 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.99□□□□□ -2.09
CTDNEP1O95476 AC108059.3-201ENST00000456388 214 ntBASIC1.99□□□□□ -2.09
CTDNEP1O95476 RAP1BP2-201ENST00000478270 544 ntBASIC1.99□□□□□ -2.09
CTDNEP1O95476 RPS27P21-201ENST00000486977 252 ntBASIC1.99□□□□□ -2.09
CTDNEP1O95476 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.99□□□□□ -2.09
CTDNEP1O95476 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.99□□□□□ -2.09
CTDNEP1O95476 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.99□□□□□ -2.09
CTDNEP1O95476 SNORA31.3-201ENST00000516029 96 ntBASIC1.99□□□□□ -2.09
CTDNEP1O95476 RNU6-927P-201ENST00000516199 100 ntBASIC1.99□□□□□ -2.09
CTDNEP1O95476 RN7SKP258-201ENST00000517151 304 ntBASIC1.99□□□□□ -2.09
CTDNEP1O95476 AC022878.1-201ENST00000530684 149 ntBASIC1.99□□□□□ -2.09
CTDNEP1O95476 AC093012.1-202ENST00000549403 582 ntBASIC1.99□□□□□ -2.09
CTDNEP1O95476 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.99□□□□□ -2.09
CTDNEP1O95476 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.99□□□□□ -2.09
CTDNEP1O95476 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.99□□□□□ -2.09
CTDNEP1O95476 AC008088.1-201ENST00000580993 280 ntBASIC1.99□□□□□ -2.09
CTDNEP1O95476 HMGN2P15-201ENST00000585707 270 ntBASIC1.99□□□□□ -2.09
CTDNEP1O95476 AC009977.1-201ENST00000586015 570 ntBASIC1.99□□□□□ -2.09
CTDNEP1O95476 AC121247.2-201ENST00000604776 136 ntBASIC1.99□□□□□ -2.09
CTDNEP1O95476 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.99□□□□□ -2.09
CTDNEP1O95476 AC090970.3-201ENST00000612566 866 ntBASIC1.99□□□□□ -2.09
CTDNEP1O95476 AC008498.1-201ENST00000613012 531 ntBASIC1.99□□□□□ -2.09
CTDNEP1O95476 AC006338.1-201ENST00000618453 749 ntBASIC1.99□□□□□ -2.09
CTDNEP1O95476 AC009878.1-201ENST00000621819 340 ntBASIC1.99□□□□□ -2.09
CTDNEP1O95476 AL031601.2-202ENST00000622650 282 ntBASIC1.99□□□□□ -2.09
CTDNEP1O95476 AC084768.2-201ENST00000622736 221 ntBASIC1.99□□□□□ -2.09
CTDNEP1O95476 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CTDNEP1O95476 RNU6-1284P-201ENST00000363701 100 ntBASIC1.98□□□□□ -2.09
CTDNEP1O95476 RNU6-701P-201ENST00000384059 107 ntBASIC1.98□□□□□ -2.09
CTDNEP1O95476 RNU6-297P-201ENST00000384636 107 ntBASIC1.98□□□□□ -2.09
CTDNEP1O95476 RNU6-278P-201ENST00000390945 109 ntBASIC1.98□□□□□ -2.09
CTDNEP1O95476 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CTDNEP1O95476 ELOCP17-201ENST00000414751 326 ntBASIC1.98□□□□□ -2.09
CTDNEP1O95476 CYCSP49-201ENST00000420810 319 ntBASIC1.98□□□□□ -2.09
CTDNEP1O95476 AC007283.2-201ENST00000424739 197 ntBASIC1.98□□□□□ -2.09
CTDNEP1O95476 AL031667.1-201ENST00000440222 725 ntBASIC1.98□□□□□ -2.09
CTDNEP1O95476 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CTDNEP1O95476 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.98□□□□□ -2.09
CTDNEP1O95476 SSXP1-201ENST00000453640 473 ntBASIC1.98□□□□□ -2.09
CTDNEP1O95476 RPL12P25-201ENST00000455592 494 ntBASIC1.98□□□□□ -2.09
CTDNEP1O95476 MRPS17P3-201ENST00000465453 385 ntBASIC1.98□□□□□ -2.09
CTDNEP1O95476 MTND5P13-201ENST00000513046 1079 ntBASIC1.98□□□□□ -2.09
CTDNEP1O95476 SCARNA17.1-201ENST00000516211 143 ntBASIC1.98□□□□□ -2.09
CTDNEP1O95476 SCARNA17.2-201ENST00000516334 143 ntBASIC1.98□□□□□ -2.09
CTDNEP1O95476 RNU6-250P-201ENST00000516958 103 ntBASIC1.98□□□□□ -2.09
CTDNEP1O95476 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.98□□□□□ -2.09
CTDNEP1O95476 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.98□□□□□ -2.09
CTDNEP1O95476 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.98□□□□□ -2.09
CTDNEP1O95476 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.98□□□□□ -2.09
CTDNEP1O95476 AC024614.2-201ENST00000577584 372 ntBASIC1.98□□□□□ -2.09
CTDNEP1O95476 AC002545.1-201ENST00000592511 181 ntBASIC1.98□□□□□ -2.09
CTDNEP1O95476 AC012360.2-201ENST00000609349 391 ntBASIC1.98□□□□□ -2.09
CTDNEP1O95476 AC091304.9-201ENST00000612091 226 ntBASIC1.98□□□□□ -2.09
CTDNEP1O95476 SCARNA17.4-201ENST00000614296 143 ntBASIC1.98□□□□□ -2.09
CTDNEP1O95476 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.98□□□□□ -2.09
CTDNEP1O95476 AC078883.4-201ENST00000623218 367 ntBASIC1.98□□□□□ -2.09
CTDNEP1O95476 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CTDNEP1O95476 MTND4P27-201ENST00000450813 1354 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms