Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.91□□□□□ -2.26
SNRNP200O75643 AC026414.1-201ENST00000504046 698 ntBASIC0.91□□□□□ -2.26
SNRNP200O75643 RNY4P37-201ENST00000516225 96 ntBASIC0.91□□□□□ -2.26
SNRNP200O75643 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.91□□□□□ -2.26
SNRNP200O75643 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.91□□□□□ -2.26
SNRNP200O75643 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
SNRNP200O75643 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.91□□□□□ -2.26
SNRNP200O75643 AC135279.1-201ENST00000543493 504 ntBASIC0.91□□□□□ -2.26
SNRNP200O75643 SNRPGP1-201ENST00000553864 222 ntBASIC0.91□□□□□ -2.26
SNRNP200O75643 AC243960.4-201ENST00000600532 288 ntBASIC0.91□□□□□ -2.26
SNRNP200O75643 AC009974.1-201ENST00000608881 455 ntBASIC0.91□□□□□ -2.26
SNRNP200O75643 DUSP12P1-201ENST00000612874 516 ntBASIC0.91□□□□□ -2.26
SNRNP200O75643 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC0.9□□□□□ -2.26
SNRNP200O75643 Y_RNA.354-201ENST00000365448 111 ntBASIC0.9□□□□□ -2.27
SNRNP200O75643 RNU1-39P-201ENST00000383897 165 ntBASIC0.9□□□□□ -2.27
SNRNP200O75643 MIR532-201ENST00000385025 91 ntBASIC0.9□□□□□ -2.27
SNRNP200O75643 NDUFS5P1-201ENST00000405668 289 ntBASIC0.9□□□□□ -2.27
SNRNP200O75643 MIR1302-8-201ENST00000408342 128 ntBASIC0.9□□□□□ -2.27
SNRNP200O75643 ELOCP14-201ENST00000428070 331 ntBASIC0.9□□□□□ -2.27
SNRNP200O75643 MTCO1P3-201ENST00000429327 192 ntBASIC0.9□□□□□ -2.27
SNRNP200O75643 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.9□□□□□ -2.27
SNRNP200O75643 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.9□□□□□ -2.27
SNRNP200O75643 USP9YP24-201ENST00000434374 697 ntBASIC0.9□□□□□ -2.27
SNRNP200O75643 ELOCP7-201ENST00000439968 331 ntBASIC0.9□□□□□ -2.27
SNRNP200O75643 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.9□□□□□ -2.27
SNRNP200O75643 AL691517.1-201ENST00000440833 1235 ntBASIC0.9□□□□□ -2.27
SNRNP200O75643 MTND1P31-201ENST00000449206 961 ntBASIC0.9□□□□□ -2.27
SNRNP200O75643 MTCO3P27-201ENST00000514397 196 ntBASIC0.9□□□□□ -2.27
SNRNP200O75643 RNA5SP490-201ENST00000517141 136 ntBASIC0.9□□□□□ -2.27
SNRNP200O75643 RNA5SP291-201ENST00000517222 105 ntBASIC0.9□□□□□ -2.27
SNRNP200O75643 RNU6-840P-201ENST00000517275 65 ntBASIC0.9□□□□□ -2.27
SNRNP200O75643 DEFB131D-201ENST00000526803 184 ntBASIC0.9□□□□□ -2.27
SNRNP200O75643 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
SNRNP200O75643 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC0.9□□□□□ -2.27
SNRNP200O75643 NDUFA5P6-201ENST00000542110 379 ntBASIC0.9□□□□□ -2.27
SNRNP200O75643 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.9□□□□□ -2.27
SNRNP200O75643 AC091057.3-201ENST00000602684 733 ntBASIC0.9□□□□□ -2.27
SNRNP200O75643 MTCYBP22-201ENST00000603788 447 ntBASIC0.9□□□□□ -2.27
SNRNP200O75643 AL358072.1-201ENST00000604156 575 ntBASIC0.9□□□□□ -2.27
SNRNP200O75643 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.9□□□□□ -2.27
SNRNP200O75643 AP003476.1-201ENST00000623984 516 ntBASIC0.9□□□□□ -2.27
SNRNP200O75643 AC091965.5-201ENST00000624785 342 ntBASIC0.9□□□□□ -2.27
SNRNP200O75643 AP003485.1-201ENST00000625093 753 ntBASIC0.9□□□□□ -2.27
SNRNP200O75643 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
SNRNP200O75643 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
SNRNP200O75643 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
SNRNP200O75643 AC092447.10-201ENST00000620607 1652 ntBASIC0.9□□□□□ -2.27
SNRNP200O75643 Y_RNA.245-201ENST00000364493 95 ntBASIC0.89□□□□□ -2.27
SNRNP200O75643 AL590084.2-201ENST00000401481 382 ntBASIC0.89□□□□□ -2.27
SNRNP200O75643 AC127391.1-201ENST00000411737 98 ntBASIC0.89□□□□□ -2.27
SNRNP200O75643 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.89□□□□□ -2.27
SNRNP200O75643 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.89□□□□□ -2.27
SNRNP200O75643 RPL21P134-201ENST00000453468 483 ntBASIC0.89□□□□□ -2.27
SNRNP200O75643 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC0.89□□□□□ -2.27
SNRNP200O75643 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.89□□□□□ -2.27
SNRNP200O75643 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.89□□□□□ -2.27
SNRNP200O75643 TPT1P8-201ENST00000510120 555 ntBASIC0.89□□□□□ -2.27
SNRNP200O75643 DUXAP5-201ENST00000529668 529 ntBASIC0.89□□□□□ -2.27
SNRNP200O75643 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.89□□□□□ -2.27
SNRNP200O75643 AC092140.2-201ENST00000618027 521 ntBASIC0.89□□□□□ -2.27
SNRNP200O75643 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
SNRNP200O75643 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
SNRNP200O75643 ICE2P2-201ENST00000483823 2787 ntBASIC0.89□□□□□ -2.27
SNRNP200O75643 RNU6-288P-201ENST00000363690 104 ntBASIC0.89□□□□□ -2.27
SNRNP200O75643 RNU6-549P-201ENST00000384433 107 ntBASIC0.89□□□□□ -2.27
SNRNP200O75643 MIR29C-201ENST00000385231 88 ntBASIC0.89□□□□□ -2.27
SNRNP200O75643 USP9YP6-201ENST00000413550 854 ntBASIC0.89□□□□□ -2.27
SNRNP200O75643 PTGES3P4-201ENST00000426243 356 ntBASIC0.89□□□□□ -2.27
SNRNP200O75643 RSU1P2-202ENST00000437884 485 ntBASIC0.89□□□□□ -2.27
SNRNP200O75643 HSPE1P21-201ENST00000438283 308 ntBASIC0.89□□□□□ -2.27
SNRNP200O75643 AC009238.1-201ENST00000442165 424 ntBASIC0.89□□□□□ -2.27
SNRNP200O75643 AC009237.6-201ENST00000446969 424 ntBASIC0.89□□□□□ -2.27
SNRNP200O75643 AL590365.1-201ENST00000450788 243 ntBASIC0.89□□□□□ -2.27
SNRNP200O75643 RPS29P1-201ENST00000465274 159 ntBASIC0.89□□□□□ -2.27
SNRNP200O75643 RNU6-113P-201ENST00000516653 101 ntBASIC0.89□□□□□ -2.27
SNRNP200O75643 RN7SKP49-201ENST00000516675 260 ntBASIC0.89□□□□□ -2.27
SNRNP200O75643 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.89□□□□□ -2.27
SNRNP200O75643 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.89□□□□□ -2.27
SNRNP200O75643 AC011604.1-201ENST00000545978 196 ntBASIC0.89□□□□□ -2.27
SNRNP200O75643 ZNF971P-201ENST00000562068 1249 ntBASIC0.89□□□□□ -2.27
SNRNP200O75643 MIR4714-201ENST00000580728 77 ntBASIC0.89□□□□□ -2.27
SNRNP200O75643 AL133445.2-201ENST00000611191 527 ntBASIC0.89□□□□□ -2.27
SNRNP200O75643 SLC10A5P1-201ENST00000379063 1306 ntBASIC0.88□□□□□ -2.27
SNRNP200O75643 RNU6-560P-201ENST00000364007 108 ntBASIC0.88□□□□□ -2.27
SNRNP200O75643 Y_RNA.408-201ENST00000383987 102 ntBASIC0.88□□□□□ -2.27
SNRNP200O75643 RNU6-1207P-201ENST00000384343 107 ntBASIC0.88□□□□□ -2.27
SNRNP200O75643 MIR548J-201ENST00000408833 112 ntBASIC0.88□□□□□ -2.27
SNRNP200O75643 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.88□□□□□ -2.27
SNRNP200O75643 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.88□□□□□ -2.27
SNRNP200O75643 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC0.88□□□□□ -2.27
SNRNP200O75643 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.88□□□□□ -2.27
SNRNP200O75643 MRPS17P3-201ENST00000465453 385 ntBASIC0.88□□□□□ -2.27
SNRNP200O75643 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.88□□□□□ -2.27
SNRNP200O75643 RPL7P43-201ENST00000478876 753 ntBASIC0.88□□□□□ -2.27
SNRNP200O75643 AC018437.1-201ENST00000492214 406 ntBASIC0.88□□□□□ -2.27
SNRNP200O75643 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.88□□□□□ -2.27
SNRNP200O75643 TMEM251P1-201ENST00000503717 318 ntBASIC0.88□□□□□ -2.27
SNRNP200O75643 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.88□□□□□ -2.27
SNRNP200O75643 RPF2P2-201ENST00000504693 896 ntBASIC0.88□□□□□ -2.27
SNRNP200O75643 AC112198.4-201ENST00000515450 351 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms