Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.89□□□□□ -2.11
NPHP4O75161 AC069431.2-201ENST00000604149 1099 ntBASIC1.89□□□□□ -2.11
NPHP4O75161 AC007349.4-201ENST00000608114 532 ntBASIC1.89□□□□□ -2.11
NPHP4O75161 AL589743.7-201ENST00000612637 233 ntBASIC1.89□□□□□ -2.11
NPHP4O75161 AC012640.5-201ENST00000623897 319 ntBASIC1.89□□□□□ -2.11
NPHP4O75161 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.88□□□□□ -2.11
NPHP4O75161 RNU6-778P-201ENST00000363269 103 ntBASIC1.88□□□□□ -2.11
NPHP4O75161 RNU6-621P-201ENST00000364752 109 ntBASIC1.88□□□□□ -2.11
NPHP4O75161 CCNG1P1-201ENST00000406783 885 ntBASIC1.88□□□□□ -2.11
NPHP4O75161 AL355143.1-201ENST00000407101 841 ntBASIC1.88□□□□□ -2.11
NPHP4O75161 MIR320C1-201ENST00000408566 88 ntBASIC1.88□□□□□ -2.11
NPHP4O75161 RNU4-22P-201ENST00000411058 166 ntBASIC1.88□□□□□ -2.11
NPHP4O75161 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.88□□□□□ -2.11
NPHP4O75161 RPS3AP37-201ENST00000419176 745 ntBASIC1.88□□□□□ -2.11
NPHP4O75161 ELOCP14-201ENST00000428070 331 ntBASIC1.88□□□□□ -2.11
NPHP4O75161 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NPHP4O75161 ELOCP7-201ENST00000439968 331 ntBASIC1.88□□□□□ -2.11
NPHP4O75161 EEF1A1P39-201ENST00000440791 250 ntBASIC1.88□□□□□ -2.11
NPHP4O75161 OSTCP8-201ENST00000445117 448 ntBASIC1.88□□□□□ -2.11
NPHP4O75161 MTCO1P27-201ENST00000448269 226 ntBASIC1.88□□□□□ -2.11
NPHP4O75161 PAXBP1P1-201ENST00000449315 447 ntBASIC1.88□□□□□ -2.11
NPHP4O75161 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.88□□□□□ -2.11
NPHP4O75161 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.88□□□□□ -2.11
NPHP4O75161 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.88□□□□□ -2.11
NPHP4O75161 AC109445.1-201ENST00000512356 383 ntBASIC1.88□□□□□ -2.11
NPHP4O75161 RNA5SP436-201ENST00000516020 115 ntBASIC1.88□□□□□ -2.11
NPHP4O75161 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.88□□□□□ -2.11
NPHP4O75161 AC109446.2-201ENST00000567872 497 ntBASIC1.88□□□□□ -2.11
NPHP4O75161 AC009127.3-201ENST00000570531 403 ntBASIC1.88□□□□□ -2.11
NPHP4O75161 AC024619.4-201ENST00000580924 316 ntBASIC1.88□□□□□ -2.11
NPHP4O75161 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.88□□□□□ -2.11
NPHP4O75161 AC008121.1-201ENST00000603244 268 ntBASIC1.88□□□□□ -2.11
NPHP4O75161 AC135507.1-201ENST00000607214 561 ntBASIC1.88□□□□□ -2.11
NPHP4O75161 AC239868.4-201ENST00000608318 671 ntBASIC1.88□□□□□ -2.11
NPHP4O75161 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.88□□□□□ -2.11
NPHP4O75161 AL031601.2-202ENST00000622650 282 ntBASIC1.88□□□□□ -2.11
NPHP4O75161 AC095038.3-201ENST00000634439 195 ntBASIC1.88□□□□□ -2.11
NPHP4O75161 U2.21-201ENST00000637295 81 ntBASIC1.88□□□□□ -2.11
NPHP4O75161 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
NPHP4O75161 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
NPHP4O75161 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
NPHP4O75161 AC110491.1-201ENST00000562191 2010 ntBASIC1.87□□□□□ -2.11
NPHP4O75161 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.87□□□□□ -2.11
NPHP4O75161 Y_RNA.465-201ENST00000384293 102 ntBASIC1.87□□□□□ -2.11
NPHP4O75161 HMGB1P49-201ENST00000418882 569 ntBASIC1.87□□□□□ -2.11
NPHP4O75161 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.87□□□□□ -2.11
NPHP4O75161 AL078601.1-201ENST00000444542 271 ntBASIC1.87□□□□□ -2.11
NPHP4O75161 AC020550.1-201ENST00000447385 163 ntBASIC1.87□□□□□ -2.11
NPHP4O75161 DYNLL1P5-201ENST00000467158 270 ntBASIC1.87□□□□□ -2.11
NPHP4O75161 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.87□□□□□ -2.11
NPHP4O75161 AL133153.1-201ENST00000557756 303 ntBASIC1.87□□□□□ -2.11
NPHP4O75161 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.87□□□□□ -2.11
NPHP4O75161 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.87□□□□□ -2.11
NPHP4O75161 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.87□□□□□ -2.11
NPHP4O75161 AC006386.1-201ENST00000619436 415 ntBASIC1.87□□□□□ -2.11
NPHP4O75161 AC109809.1-201ENST00000619665 545 ntBASIC1.87□□□□□ -2.11
NPHP4O75161 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
NPHP4O75161 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.87□□□□□ -2.11
NPHP4O75161 DDX43P2-201ENST00000604753 1354 ntBASIC1.87□□□□□ -2.11
NPHP4O75161 AL137003.2-201ENST00000606924 2538 ntBASIC1.86□□□□□ -2.11
NPHP4O75161 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
NPHP4O75161 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
NPHP4O75161 RNU6-223P-201ENST00000362830 107 ntBASIC1.86□□□□□ -2.11
NPHP4O75161 RNU5E-10P-201ENST00000363506 118 ntBASIC1.86□□□□□ -2.11
NPHP4O75161 RNU6-512P-201ENST00000364438 103 ntBASIC1.86□□□□□ -2.11
NPHP4O75161 Y_RNA.393-201ENST00000383936 102 ntBASIC1.86□□□□□ -2.11
NPHP4O75161 MIR320A-201ENST00000385302 82 ntBASIC1.86□□□□□ -2.11
NPHP4O75161 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.86□□□□□ -2.11
NPHP4O75161 MTCO1P17-201ENST00000411522 491 ntBASIC1.86□□□□□ -2.11
NPHP4O75161 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.86□□□□□ -2.11
NPHP4O75161 HMGB1P9-201ENST00000429856 646 ntBASIC1.86□□□□□ -2.11
NPHP4O75161 AC244035.1-201ENST00000430042 390 ntBASIC1.86□□□□□ -2.11
NPHP4O75161 AL358794.1-201ENST00000445689 381 ntBASIC1.86□□□□□ -2.11
NPHP4O75161 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.86□□□□□ -2.11
NPHP4O75161 ANKRD26P4-201ENST00000455755 950 ntBASIC1.86□□□□□ -2.11
NPHP4O75161 AC093809.1-201ENST00000509155 340 ntBASIC1.86□□□□□ -2.11
NPHP4O75161 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.86□□□□□ -2.11
NPHP4O75161 MTCYBP43-201ENST00000513621 740 ntBASIC1.86□□□□□ -2.11
NPHP4O75161 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.86□□□□□ -2.11
NPHP4O75161 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.86□□□□□ -2.11
NPHP4O75161 AP003033.1-201ENST00000527244 415 ntBASIC1.86□□□□□ -2.11
NPHP4O75161 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.86□□□□□ -2.11
NPHP4O75161 AP001269.3-201ENST00000588718 329 ntBASIC1.86□□□□□ -2.11
NPHP4O75161 SNORD14A-201ENST00000606526 91 ntBASIC1.86□□□□□ -2.11
NPHP4O75161 AL136313.1-201ENST00000624804 202 ntBASIC1.86□□□□□ -2.11
NPHP4O75161 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.86□□□□□ -2.11
NPHP4O75161 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
NPHP4O75161 RNU6-1167P-201ENST00000363227 94 ntBASIC1.85□□□□□ -2.11
NPHP4O75161 SNORA3A-201ENST00000364113 130 ntBASIC1.85□□□□□ -2.11
NPHP4O75161 MIR19A-201ENST00000384878 82 ntBASIC1.85□□□□□ -2.11
NPHP4O75161 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
NPHP4O75161 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.85□□□□□ -2.11
NPHP4O75161 USP9YP26-201ENST00000421008 661 ntBASIC1.85□□□□□ -2.11
NPHP4O75161 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.85□□□□□ -2.11
NPHP4O75161 KLF3P2-201ENST00000465138 268 ntBASIC1.85□□□□□ -2.11
NPHP4O75161 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.85□□□□□ -2.11
NPHP4O75161 BZW1P2-201ENST00000473537 826 ntBASIC1.85□□□□□ -2.11
NPHP4O75161 AC139453.3-201ENST00000493276 369 ntBASIC1.85□□□□□ -2.11
NPHP4O75161 AC093281.2-201ENST00000510153 597 ntBASIC1.85□□□□□ -2.11
NPHP4O75161 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms