Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.8□□□□□ -2.12
BRD4O60885 AC005832.3-201ENST00000537929 631 ntBASIC1.8□□□□□ -2.12
BRD4O60885 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.8□□□□□ -2.12
BRD4O60885 AL132657.2-201ENST00000564417 358 ntBASIC1.8□□□□□ -2.12
BRD4O60885 MTND3P13-201ENST00000574391 343 ntBASIC1.8□□□□□ -2.12
BRD4O60885 AC090615.1-201ENST00000577519 154 ntBASIC1.8□□□□□ -2.12
BRD4O60885 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.8□□□□□ -2.12
BRD4O60885 AL138963.2-201ENST00000605137 226 ntBASIC1.8□□□□□ -2.12
BRD4O60885 AC080078.3-201ENST00000605407 463 ntBASIC1.8□□□□□ -2.12
BRD4O60885 AL121652.1-201ENST00000608851 448 ntBASIC1.8□□□□□ -2.12
BRD4O60885 AC013476.2-201ENST00000614456 459 ntBASIC1.8□□□□□ -2.12
BRD4O60885 AC084824.4-201ENST00000620106 731 ntBASIC1.8□□□□□ -2.12
BRD4O60885 AC104985.3-201ENST00000623479 597 ntBASIC1.8□□□□□ -2.12
BRD4O60885 AC231657.1-201ENST00000624313 397 ntBASIC1.8□□□□□ -2.12
BRD4O60885 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
BRD4O60885 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.79□□□□□ -2.12
BRD4O60885 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.79□□□□□ -2.12
BRD4O60885 RNU6-28P-201ENST00000362378 107 ntBASIC1.79□□□□□ -2.12
BRD4O60885 U3.13-201ENST00000364804 214 ntBASIC1.79□□□□□ -2.12
BRD4O60885 Y_RNA.374-201ENST00000365606 101 ntBASIC1.79□□□□□ -2.12
BRD4O60885 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
BRD4O60885 SNORD116-12-201ENST00000384468 92 ntBASIC1.79□□□□□ -2.12
BRD4O60885 AL355143.1-201ENST00000407101 841 ntBASIC1.79□□□□□ -2.12
BRD4O60885 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.79□□□□□ -2.12
BRD4O60885 RN7SKP51-201ENST00000410781 304 ntBASIC1.79□□□□□ -2.12
BRD4O60885 AL449283.1-202ENST00000418249 604 ntBASIC1.79□□□□□ -2.12
BRD4O60885 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.79□□□□□ -2.12
BRD4O60885 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.79□□□□□ -2.12
BRD4O60885 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.79□□□□□ -2.12
BRD4O60885 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.79□□□□□ -2.12
BRD4O60885 MTND6P13-201ENST00000443510 523 ntBASIC1.79□□□□□ -2.12
BRD4O60885 ATP5J2P3-201ENST00000451550 258 ntBASIC1.79□□□□□ -2.12
BRD4O60885 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.79□□□□□ -2.12
BRD4O60885 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.79□□□□□ -2.12
BRD4O60885 AP003033.1-201ENST00000527244 415 ntBASIC1.79□□□□□ -2.12
BRD4O60885 SLC2A13P1-201ENST00000531560 322 ntBASIC1.79□□□□□ -2.12
BRD4O60885 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.79□□□□□ -2.12
BRD4O60885 BNIP3P26-201ENST00000600827 554 ntBASIC1.79□□□□□ -2.12
BRD4O60885 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.79□□□□□ -2.12
BRD4O60885 AC023158.2-201ENST00000614876 543 ntBASIC1.79□□□□□ -2.12
BRD4O60885 MIR6788-201ENST00000618842 66 ntBASIC1.79□□□□□ -2.12
BRD4O60885 MIR5739-201ENST00000619803 80 ntBASIC1.79□□□□□ -2.12
BRD4O60885 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
BRD4O60885 AC110491.1-201ENST00000562191 2010 ntBASIC1.79□□□□□ -2.12
BRD4O60885 SNORA40.2-201ENST00000390847 128 ntBASIC1.78□□□□□ -2.12
BRD4O60885 RNA5SP450-201ENST00000411206 102 ntBASIC1.78□□□□□ -2.12
BRD4O60885 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.78□□□□□ -2.12
BRD4O60885 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.78□□□□□ -2.12
BRD4O60885 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.78□□□□□ -2.12
BRD4O60885 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.78□□□□□ -2.12
BRD4O60885 CYP2C59P-201ENST00000457790 269 ntBASIC1.78□□□□□ -2.12
BRD4O60885 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
BRD4O60885 SNORD19.2-201ENST00000516978 73 ntBASIC1.78□□□□□ -2.12
BRD4O60885 AC091163.3-201ENST00000518269 1144 ntBASIC1.78□□□□□ -2.12
BRD4O60885 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.78□□□□□ -2.12
BRD4O60885 AC012435.1-202ENST00000568772 240 ntBASIC1.78□□□□□ -2.12
BRD4O60885 MIR3198-2-201ENST00000577868 80 ntBASIC1.78□□□□□ -2.12
BRD4O60885 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.78□□□□□ -2.12
BRD4O60885 BNIP3P25-201ENST00000596023 559 ntBASIC1.78□□□□□ -2.12
BRD4O60885 AL138478.1-201ENST00000612252 832 ntBASIC1.78□□□□□ -2.12
BRD4O60885 AL158163.2-201ENST00000619110 700 ntBASIC1.78□□□□□ -2.12
BRD4O60885 AC024581.2-201ENST00000619986 252 ntBASIC1.78□□□□□ -2.12
BRD4O60885 AL049777.1-201ENST00000622740 518 ntBASIC1.78□□□□□ -2.12
BRD4O60885 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.78□□□□□ -2.12
BRD4O60885 AC004808.1-201ENST00000627671 721 ntBASIC1.78□□□□□ -2.12
BRD4O60885 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.78□□□□□ -2.12
BRD4O60885 AL359854.1-201ENST00000614203 1594 ntBASIC1.78□□□□□ -2.12
BRD4O60885 AL079343.1-201ENST00000572358 1771 ntBASIC1.78□□□□□ -2.12
BRD4O60885 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.78□□□□□ -2.12
BRD4O60885 RNU6-203P-201ENST00000384038 104 ntBASIC1.77□□□□□ -2.13
BRD4O60885 RPS12P24-201ENST00000412619 387 ntBASIC1.77□□□□□ -2.13
BRD4O60885 NDUFS5P4-201ENST00000412983 318 ntBASIC1.77□□□□□ -2.13
BRD4O60885 TIMM9P2-201ENST00000419324 266 ntBASIC1.77□□□□□ -2.13
BRD4O60885 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.77□□□□□ -2.13
BRD4O60885 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.77□□□□□ -2.13
BRD4O60885 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.77□□□□□ -2.13
BRD4O60885 MTCO2P25-201ENST00000447065 681 ntBASIC1.77□□□□□ -2.13
BRD4O60885 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.77□□□□□ -2.13
BRD4O60885 AL049829.1-201ENST00000465411 156 ntBASIC1.77□□□□□ -2.13
BRD4O60885 COX6CP14-201ENST00000469580 174 ntBASIC1.77□□□□□ -2.13
BRD4O60885 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.77□□□□□ -2.13
BRD4O60885 AC096745.1-201ENST00000509945 370 ntBASIC1.77□□□□□ -2.13
BRD4O60885 SNORA44.1-201ENST00000517031 108 ntBASIC1.77□□□□□ -2.13
BRD4O60885 AP005597.4-201ENST00000526762 229 ntBASIC1.77□□□□□ -2.13
BRD4O60885 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.77□□□□□ -2.13
BRD4O60885 BNIP3P27-201ENST00000599991 412 ntBASIC1.77□□□□□ -2.13
BRD4O60885 AC011451.2-201ENST00000604303 598 ntBASIC1.77□□□□□ -2.13
BRD4O60885 AC073413.2-201ENST00000604332 360 ntBASIC1.77□□□□□ -2.13
BRD4O60885 AL158050.2-201ENST00000605336 568 ntBASIC1.77□□□□□ -2.13
BRD4O60885 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.77□□□□□ -2.13
BRD4O60885 AF129408.1-201ENST00000608767 431 ntBASIC1.77□□□□□ -2.13
BRD4O60885 PART1_2.1-201ENST00000612397 250 ntBASIC1.77□□□□□ -2.13
BRD4O60885 AL596245.1-201ENST00000618994 362 ntBASIC1.77□□□□□ -2.13
BRD4O60885 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.77□□□□□ -2.13
BRD4O60885 Y_RNA.36-201ENST00000362602 112 ntBASIC1.76□□□□□ -2.13
BRD4O60885 U8.3-201ENST00000363321 132 ntBASIC1.76□□□□□ -2.13
BRD4O60885 RNU6-560P-201ENST00000364007 108 ntBASIC1.76□□□□□ -2.13
BRD4O60885 DHFRP6-201ENST00000401776 268 ntBASIC1.76□□□□□ -2.13
BRD4O60885 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.76□□□□□ -2.13
BRD4O60885 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms