Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.25□□□□□ -2.21
SSNA1O43805 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.25□□□□□ -2.21
SSNA1O43805 AC110588.1-201ENST00000559699 137 ntBASIC1.25□□□□□ -2.21
SSNA1O43805 AC008269.2-201ENST00000561915 1105 ntBASIC1.25□□□□□ -2.21
SSNA1O43805 AC025678.1-201ENST00000567861 338 ntBASIC1.25□□□□□ -2.21
SSNA1O43805 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.25□□□□□ -2.21
SSNA1O43805 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.25□□□□□ -2.21
SSNA1O43805 MTATP6P2-201ENST00000603319 678 ntBASIC1.25□□□□□ -2.21
SSNA1O43805 AC007363.1-201ENST00000604736 620 ntBASIC1.25□□□□□ -2.21
SSNA1O43805 BX248123.2-201ENST00000606318 124 ntBASIC1.25□□□□□ -2.21
SSNA1O43805 AC116312.1-201ENST00000606841 314 ntBASIC1.25□□□□□ -2.21
SSNA1O43805 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.25□□□□□ -2.21
SSNA1O43805 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.25□□□□□ -2.21
SSNA1O43805 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.25□□□□□ -2.21
SSNA1O43805 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SSNA1O43805 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SSNA1O43805 AL136360.1-201ENST00000503377 1900 ntBASIC1.25□□□□□ -2.21
SSNA1O43805 AC006026.1-201ENST00000444025 1803 ntBASIC1.24□□□□□ -2.21
SSNA1O43805 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.24□□□□□ -2.21
SSNA1O43805 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
SSNA1O43805 RNU6-661P-201ENST00000362409 107 ntBASIC1.24□□□□□ -2.21
SSNA1O43805 SNORA80A-201ENST00000363922 136 ntBASIC1.24□□□□□ -2.21
SSNA1O43805 RNU6-944P-201ENST00000364023 107 ntBASIC1.24□□□□□ -2.21
SSNA1O43805 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
SSNA1O43805 SNORA48.1-201ENST00000390879 135 ntBASIC1.24□□□□□ -2.21
SSNA1O43805 RNU6-817P-201ENST00000391083 104 ntBASIC1.24□□□□□ -2.21
SSNA1O43805 SRIP3-201ENST00000413200 219 ntBASIC1.24□□□□□ -2.21
SSNA1O43805 AC016831.2-201ENST00000417179 352 ntBASIC1.24□□□□□ -2.21
SSNA1O43805 RPL30P13-201ENST00000418873 348 ntBASIC1.24□□□□□ -2.21
SSNA1O43805 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.24□□□□□ -2.21
SSNA1O43805 RAC1P6-201ENST00000423911 575 ntBASIC1.24□□□□□ -2.21
SSNA1O43805 AC118469.1-201ENST00000442943 488 ntBASIC1.24□□□□□ -2.21
SSNA1O43805 MTCO1P27-201ENST00000448269 226 ntBASIC1.24□□□□□ -2.21
SSNA1O43805 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.24□□□□□ -2.21
SSNA1O43805 SSXP1-201ENST00000453640 473 ntBASIC1.24□□□□□ -2.21
SSNA1O43805 RPS29P23-201ENST00000458635 123 ntBASIC1.24□□□□□ -2.21
SSNA1O43805 AL121594.1-201ENST00000475906 575 ntBASIC1.24□□□□□ -2.21
SSNA1O43805 AC004924.1-201ENST00000480160 781 ntBASIC1.24□□□□□ -2.21
SSNA1O43805 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.24□□□□□ -2.21
SSNA1O43805 MTCYBP35-201ENST00000503630 1137 ntBASIC1.24□□□□□ -2.21
SSNA1O43805 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
SSNA1O43805 RNVU1-2-201ENST00000516326 135 ntBASIC1.24□□□□□ -2.21
SSNA1O43805 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.24□□□□□ -2.21
SSNA1O43805 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.24□□□□□ -2.21
SSNA1O43805 AC022616.8-201ENST00000533569 253 ntBASIC1.24□□□□□ -2.21
SSNA1O43805 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.24□□□□□ -2.21
SSNA1O43805 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.24□□□□□ -2.21
SSNA1O43805 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.24□□□□□ -2.21
SSNA1O43805 BNIP3P30-201ENST00000601184 574 ntBASIC1.24□□□□□ -2.21
SSNA1O43805 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.24□□□□□ -2.21
SSNA1O43805 WISP1-OT1-201ENST00000602893 642 ntBASIC1.24□□□□□ -2.21
SSNA1O43805 uc_338.15-201ENST00000615470 191 ntBASIC1.24□□□□□ -2.21
SSNA1O43805 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.24□□□□□ -2.21
SSNA1O43805 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
SSNA1O43805 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.23□□□□□ -2.21
SSNA1O43805 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
SSNA1O43805 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
SSNA1O43805 BTF3L4P2-201ENST00000392798 346 ntBASIC1.23□□□□□ -2.21
SSNA1O43805 FCF1P10-201ENST00000407590 479 ntBASIC1.23□□□□□ -2.21
SSNA1O43805 RPS12P24-201ENST00000412619 387 ntBASIC1.23□□□□□ -2.21
SSNA1O43805 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.23□□□□□ -2.21
SSNA1O43805 AL354941.1-201ENST00000438600 464 ntBASIC1.23□□□□□ -2.21
SSNA1O43805 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.23□□□□□ -2.21
SSNA1O43805 MTCO2P25-201ENST00000447065 681 ntBASIC1.23□□□□□ -2.21
SSNA1O43805 AL590365.1-201ENST00000450788 243 ntBASIC1.23□□□□□ -2.21
SSNA1O43805 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.23□□□□□ -2.21
SSNA1O43805 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.23□□□□□ -2.21
SSNA1O43805 AC098862.1-201ENST00000504991 413 ntBASIC1.23□□□□□ -2.21
SSNA1O43805 AC113347.3-201ENST00000509113 148 ntBASIC1.23□□□□□ -2.21
SSNA1O43805 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.23□□□□□ -2.21
SSNA1O43805 MTND1P36-201ENST00000522384 936 ntBASIC1.23□□□□□ -2.21
SSNA1O43805 AP003034.1-201ENST00000534621 422 ntBASIC1.23□□□□□ -2.21
SSNA1O43805 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.23□□□□□ -2.21
SSNA1O43805 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.23□□□□□ -2.21
SSNA1O43805 SUB1P3-201ENST00000564581 315 ntBASIC1.23□□□□□ -2.21
SSNA1O43805 MTND3P13-201ENST00000574391 343 ntBASIC1.23□□□□□ -2.21
SSNA1O43805 MTCYBP33-201ENST00000575007 1130 ntBASIC1.23□□□□□ -2.21
SSNA1O43805 AC008507.2-201ENST00000588402 1176 ntBASIC1.23□□□□□ -2.21
SSNA1O43805 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
SSNA1O43805 AC012065.4-201ENST00000602445 679 ntBASIC1.23□□□□□ -2.21
SSNA1O43805 AP001981.2-201ENST00000603241 418 ntBASIC1.23□□□□□ -2.21
SSNA1O43805 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.23□□□□□ -2.21
SSNA1O43805 PRR13P7-201ENST00000605538 430 ntBASIC1.23□□□□□ -2.21
SSNA1O43805 MIR502-201ENST00000606349 86 ntBASIC1.23□□□□□ -2.21
SSNA1O43805 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.23□□□□□ -2.21
SSNA1O43805 AL136981.2-201ENST00000617319 734 ntBASIC1.23□□□□□ -2.21
SSNA1O43805 AL512427.1-201ENST00000618593 349 ntBASIC1.23□□□□□ -2.21
SSNA1O43805 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SSNA1O43805 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
SSNA1O43805 FARSBP1-201ENST00000435808 1778 ntBASIC1.22□□□□□ -2.21
SSNA1O43805 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.22□□□□□ -2.21
SSNA1O43805 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.22□□□□□ -2.21
SSNA1O43805 RNU6-743P-201ENST00000364151 106 ntBASIC1.22□□□□□ -2.21
SSNA1O43805 RNA5SP88-201ENST00000365560 109 ntBASIC1.22□□□□□ -2.21
SSNA1O43805 AC119751.3-201ENST00000399720 670 ntBASIC1.22□□□□□ -2.21
SSNA1O43805 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.22□□□□□ -2.21
SSNA1O43805 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.22□□□□□ -2.21
SSNA1O43805 AC013262.1-201ENST00000426710 252 ntBASIC1.22□□□□□ -2.21
SSNA1O43805 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.22□□□□□ -2.21
SSNA1O43805 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms