Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AC007283.2-201ENST00000424739 197 ntBASIC2.22□□□□□ -2.05
MSH4O15457 PTGES3P4-201ENST00000426243 356 ntBASIC2.22□□□□□ -2.05
MSH4O15457 AL356583.2-201ENST00000426536 280 ntBASIC2.22□□□□□ -2.05
MSH4O15457 MICF-203ENST00000432679 129 ntBASIC2.22□□□□□ -2.05
MSH4O15457 HMGN2P3-201ENST00000433603 273 ntBASIC2.22□□□□□ -2.05
MSH4O15457 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.22□□□□□ -2.05
MSH4O15457 HMGN2P5-201ENST00000436882 273 ntBASIC2.22□□□□□ -2.05
MSH4O15457 UBE2D3P4-201ENST00000441973 436 ntBASIC2.22□□□□□ -2.05
MSH4O15457 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.22□□□□□ -2.05
MSH4O15457 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.22□□□□□ -2.05
MSH4O15457 KATNBL1P6-201ENST00000453433 915 ntBASIC2.22□□□□□ -2.05
MSH4O15457 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.22□□□□□ -2.05
MSH4O15457 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.22□□□□□ -2.05
MSH4O15457 RPS3AP22-201ENST00000488297 769 ntBASIC2.22□□□□□ -2.05
MSH4O15457 MTCYBP35-201ENST00000503630 1137 ntBASIC2.22□□□□□ -2.05
MSH4O15457 MRPS33P3-201ENST00000513456 322 ntBASIC2.22□□□□□ -2.05
MSH4O15457 RNU6-1315P-201ENST00000517187 99 ntBASIC2.22□□□□□ -2.05
MSH4O15457 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.22□□□□□ -2.05
MSH4O15457 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.22□□□□□ -2.05
MSH4O15457 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
MSH4O15457 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.22□□□□□ -2.05
MSH4O15457 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.22□□□□□ -2.05
MSH4O15457 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.22□□□□□ -2.05
MSH4O15457 ROCK1P1-201ENST00000573767 549 ntBASIC2.22□□□□□ -2.05
MSH4O15457 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.22□□□□□ -2.05
MSH4O15457 WISP1-OT1-201ENST00000602893 642 ntBASIC2.22□□□□□ -2.05
MSH4O15457 AC112191.3-201ENST00000604371 277 ntBASIC2.22□□□□□ -2.05
MSH4O15457 AL121917.1-203ENST00000605534 577 ntBASIC2.22□□□□□ -2.05
MSH4O15457 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
MSH4O15457 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
MSH4O15457 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
MSH4O15457 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
MSH4O15457 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.21□□□□□ -2.06
MSH4O15457 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.21□□□□□ -2.06
MSH4O15457 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
MSH4O15457 RNA5SP432-201ENST00000362480 116 ntBASIC2.21□□□□□ -2.06
MSH4O15457 RNU4-1-201ENST00000363925 141 ntBASIC2.21□□□□□ -2.06
MSH4O15457 Z98749.2-208ENST00000381646 500 ntBASIC2.21□□□□□ -2.06
MSH4O15457 Z99497.1-201ENST00000421282 135 ntBASIC2.21□□□□□ -2.06
MSH4O15457 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.21□□□□□ -2.06
MSH4O15457 AL589872.1-201ENST00000426602 288 ntBASIC2.21□□□□□ -2.06
MSH4O15457 AC007560.1-201ENST00000426912 237 ntBASIC2.21□□□□□ -2.06
MSH4O15457 AC137499.1-201ENST00000427602 88 ntBASIC2.21□□□□□ -2.06
MSH4O15457 AL591704.1-201ENST00000432574 275 ntBASIC2.21□□□□□ -2.06
MSH4O15457 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.21□□□□□ -2.06
MSH4O15457 FABP5P13-201ENST00000452144 328 ntBASIC2.21□□□□□ -2.06
MSH4O15457 AC007182.2-201ENST00000489251 402 ntBASIC2.21□□□□□ -2.06
MSH4O15457 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.21□□□□□ -2.06
MSH4O15457 AC109927.2-201ENST00000506416 303 ntBASIC2.21□□□□□ -2.06
MSH4O15457 RNU6-759P-201ENST00000516740 103 ntBASIC2.21□□□□□ -2.06
MSH4O15457 SNORA31.19-201ENST00000517079 126 ntBASIC2.21□□□□□ -2.06
MSH4O15457 RNU1-104P-201ENST00000517280 175 ntBASIC2.21□□□□□ -2.06
MSH4O15457 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
MSH4O15457 AP003122.4-201ENST00000530980 758 ntBASIC2.21□□□□□ -2.06
MSH4O15457 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.21□□□□□ -2.06
MSH4O15457 AC023824.2-201ENST00000566185 400 ntBASIC2.21□□□□□ -2.06
MSH4O15457 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.21□□□□□ -2.06
MSH4O15457 HMGN1P30-201ENST00000589286 268 ntBASIC2.21□□□□□ -2.06
MSH4O15457 AC174048.1-201ENST00000603389 144 ntBASIC2.21□□□□□ -2.06
MSH4O15457 AL021997.1-201ENST00000605757 193 ntBASIC2.21□□□□□ -2.06
MSH4O15457 AP002360.4-201ENST00000606980 481 ntBASIC2.21□□□□□ -2.06
MSH4O15457 HMGB1P24-202ENST00000615653 685 ntBASIC2.21□□□□□ -2.06
MSH4O15457 AF246928.1-201ENST00000623768 87 ntBASIC2.21□□□□□ -2.06
MSH4O15457 AC008993.2-201ENST00000631744 806 ntBASIC2.21□□□□□ -2.06
MSH4O15457 MIR7157-201ENST00000635801 60 ntBASIC2.21□□□□□ -2.06
MSH4O15457 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.21□□□□□ -2.06
MSH4O15457 MTND5P30-201ENST00000452896 1731 ntBASIC2.2□□□□□ -2.06
MSH4O15457 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
MSH4O15457 RNU6-553P-201ENST00000364047 96 ntBASIC2.2□□□□□ -2.06
MSH4O15457 SNORA67.1-201ENST00000364749 141 ntBASIC2.2□□□□□ -2.06
MSH4O15457 RNU6-1025P-201ENST00000410629 104 ntBASIC2.2□□□□□ -2.06
MSH4O15457 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.2□□□□□ -2.06
MSH4O15457 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.2□□□□□ -2.06
MSH4O15457 RPL23AP30-201ENST00000432419 501 ntBASIC2.2□□□□□ -2.06
MSH4O15457 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.2□□□□□ -2.06
MSH4O15457 FABP5P14-201ENST00000437273 393 ntBASIC2.2□□□□□ -2.06
MSH4O15457 MTND1P30-201ENST00000441241 901 ntBASIC2.2□□□□□ -2.06
MSH4O15457 RNU6-717P-201ENST00000459076 104 ntBASIC2.2□□□□□ -2.06
MSH4O15457 AP001324.2-201ENST00000461163 319 ntBASIC2.2□□□□□ -2.06
MSH4O15457 MTCO2P29-201ENST00000465212 189 ntBASIC2.2□□□□□ -2.06
MSH4O15457 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.2□□□□□ -2.06
MSH4O15457 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.2□□□□□ -2.06
MSH4O15457 MTND1P22-201ENST00000510572 951 ntBASIC2.2□□□□□ -2.06
MSH4O15457 Y_RNA.689-201ENST00000516589 107 ntBASIC2.2□□□□□ -2.06
MSH4O15457 SCARNA3-201ENST00000517097 143 ntBASIC2.2□□□□□ -2.06
MSH4O15457 AC022878.1-201ENST00000530684 149 ntBASIC2.2□□□□□ -2.06
MSH4O15457 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.2□□□□□ -2.06
MSH4O15457 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.2□□□□□ -2.06
MSH4O15457 MIR4765-201ENST00000585007 77 ntBASIC2.2□□□□□ -2.06
MSH4O15457 AC002984.1-201ENST00000591692 448 ntBASIC2.2□□□□□ -2.06
MSH4O15457 AC092354.1-201ENST00000606057 376 ntBASIC2.2□□□□□ -2.06
MSH4O15457 MIR15A-201ENST00000607334 83 ntBASIC2.2□□□□□ -2.06
MSH4O15457 AL360219.1-201ENST00000610230 366 ntBASIC2.2□□□□□ -2.06
MSH4O15457 uc_338.14-201ENST00000613162 166 ntBASIC2.2□□□□□ -2.06
MSH4O15457 AC122133.1-201ENST00000613964 233 ntBASIC2.2□□□□□ -2.06
MSH4O15457 AC010678.1-201ENST00000614118 713 ntBASIC2.2□□□□□ -2.06
MSH4O15457 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.2□□□□□ -2.06
MSH4O15457 MIR6134-201ENST00000617606 109 ntBASIC2.2□□□□□ -2.06
MSH4O15457 TEX21P-201ENST00000447107 1476 ntBASIC2.2□□□□□ -2.06
MSH4O15457 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms