Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 MTND4P16-201ENST00000466108 1367 ntBASIC1.89□□□□□ -2.11
LSM1O15116 ZNF29P-201ENST00000225587 168 ntBASIC1.89□□□□□ -2.11
LSM1O15116 Y_RNA.97-201ENST00000363094 102 ntBASIC1.89□□□□□ -2.11
LSM1O15116 RNU1-23P-201ENST00000363361 144 ntBASIC1.89□□□□□ -2.11
LSM1O15116 RNU6-960P-201ENST00000364056 120 ntBASIC1.89□□□□□ -2.11
LSM1O15116 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
LSM1O15116 SNORA67.3-201ENST00000384366 140 ntBASIC1.89□□□□□ -2.11
LSM1O15116 Y_RNA.500-201ENST00000384466 111 ntBASIC1.89□□□□□ -2.11
LSM1O15116 MIR561-201ENST00000385216 97 ntBASIC1.89□□□□□ -2.11
LSM1O15116 RPS20P2-201ENST00000402520 389 ntBASIC1.89□□□□□ -2.11
LSM1O15116 RN7SKP32-201ENST00000410167 303 ntBASIC1.89□□□□□ -2.11
LSM1O15116 RNA5SP425-201ENST00000410336 112 ntBASIC1.89□□□□□ -2.11
LSM1O15116 RNU2-62P-201ENST00000410868 191 ntBASIC1.89□□□□□ -2.11
LSM1O15116 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.89□□□□□ -2.11
LSM1O15116 AC008267.5-201ENST00000424928 265 ntBASIC1.89□□□□□ -2.11
LSM1O15116 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.89□□□□□ -2.11
LSM1O15116 AL591212.2-201ENST00000433923 257 ntBASIC1.89□□□□□ -2.11
LSM1O15116 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.89□□□□□ -2.11
LSM1O15116 AL353689.1-201ENST00000438895 199 ntBASIC1.89□□□□□ -2.11
LSM1O15116 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.89□□□□□ -2.11
LSM1O15116 UBE2V1P12-201ENST00000503954 474 ntBASIC1.89□□□□□ -2.11
LSM1O15116 MTATP6P15-201ENST00000527233 835 ntBASIC1.89□□□□□ -2.11
LSM1O15116 FAM92A1P1-201ENST00000528023 890 ntBASIC1.89□□□□□ -2.11
LSM1O15116 OR5B19P-201ENST00000531766 928 ntBASIC1.89□□□□□ -2.11
LSM1O15116 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LSM1O15116 AL049838.1-201ENST00000563647 981 ntBASIC1.89□□□□□ -2.11
LSM1O15116 MIR1273D-201ENST00000577266 86 ntBASIC1.89□□□□□ -2.11
LSM1O15116 MIR4299-201ENST00000577899 72 ntBASIC1.89□□□□□ -2.11
LSM1O15116 AC005034.5-201ENST00000604219 466 ntBASIC1.89□□□□□ -2.11
LSM1O15116 AL590808.1-201ENST00000618696 141 ntBASIC1.89□□□□□ -2.11
LSM1O15116 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.89□□□□□ -2.11
LSM1O15116 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.89□□□□□ -2.11
LSM1O15116 AC010149.2-201ENST00000637608 315 ntBASIC1.89□□□□□ -2.11
LSM1O15116 AC006927.4-201ENST00000639187 543 ntBASIC1.89□□□□□ -2.11
LSM1O15116 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.89□□□□□ -2.11
LSM1O15116 AC092881.1-201ENST00000638218 2733 ntBASIC1.89□□□□□ -2.11
LSM1O15116 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
LSM1O15116 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
LSM1O15116 AC138393.1-203ENST00000327086 343 ntBASIC1.88□□□□□ -2.11
LSM1O15116 Y_RNA.302-201ENST00000364997 102 ntBASIC1.88□□□□□ -2.11
LSM1O15116 MIR620-201ENST00000385232 95 ntBASIC1.88□□□□□ -2.11
LSM1O15116 RSL24D1P4-201ENST00000400938 484 ntBASIC1.88□□□□□ -2.11
LSM1O15116 RNU2-2P-201ENST00000410396 191 ntBASIC1.88□□□□□ -2.11
LSM1O15116 RNU6-1025P-201ENST00000410629 104 ntBASIC1.88□□□□□ -2.11
LSM1O15116 RNA5SP508-201ENST00000411327 119 ntBASIC1.88□□□□□ -2.11
LSM1O15116 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.88□□□□□ -2.11
LSM1O15116 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.88□□□□□ -2.11
LSM1O15116 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.88□□□□□ -2.11
LSM1O15116 DNAJC19P4-201ENST00000440115 345 ntBASIC1.88□□□□□ -2.11
LSM1O15116 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.88□□□□□ -2.11
LSM1O15116 AL009048.1-201ENST00000450437 298 ntBASIC1.88□□□□□ -2.11
LSM1O15116 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.88□□□□□ -2.11
LSM1O15116 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
LSM1O15116 MTAPP1-201ENST00000489154 819 ntBASIC1.88□□□□□ -2.11
LSM1O15116 AC104685.1-201ENST00000502445 371 ntBASIC1.88□□□□□ -2.11
LSM1O15116 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.88□□□□□ -2.11
LSM1O15116 AC117522.2-201ENST00000510049 657 ntBASIC1.88□□□□□ -2.11
LSM1O15116 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.88□□□□□ -2.11
LSM1O15116 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.88□□□□□ -2.11
LSM1O15116 AC119751.5-201ENST00000514077 770 ntBASIC1.88□□□□□ -2.11
LSM1O15116 SNORA4.4-201ENST00000515921 135 ntBASIC1.88□□□□□ -2.11
LSM1O15116 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.88□□□□□ -2.11
LSM1O15116 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.88□□□□□ -2.11
LSM1O15116 AC107934.1-201ENST00000522215 217 ntBASIC1.88□□□□□ -2.11
LSM1O15116 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.88□□□□□ -2.11
LSM1O15116 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.88□□□□□ -2.11
LSM1O15116 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.88□□□□□ -2.11
LSM1O15116 BNIP3P40-201ENST00000596017 556 ntBASIC1.88□□□□□ -2.11
LSM1O15116 AL031274.2-201ENST00000599419 203 ntBASIC1.88□□□□□ -2.11
LSM1O15116 SNRPGP19-201ENST00000603826 189 ntBASIC1.88□□□□□ -2.11
LSM1O15116 AC087045.1-201ENST00000605856 382 ntBASIC1.88□□□□□ -2.11
LSM1O15116 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.88□□□□□ -2.11
LSM1O15116 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.88□□□□□ -2.11
LSM1O15116 U2.15-201ENST00000611544 191 ntBASIC1.88□□□□□ -2.11
LSM1O15116 U2.16-201ENST00000613119 191 ntBASIC1.88□□□□□ -2.11
LSM1O15116 U2.12-201ENST00000613778 191 ntBASIC1.88□□□□□ -2.11
LSM1O15116 U2.20-201ENST00000613956 192 ntBASIC1.88□□□□□ -2.11
LSM1O15116 AC130324.3-201ENST00000614165 542 ntBASIC1.88□□□□□ -2.11
LSM1O15116 U2.9-201ENST00000615427 191 ntBASIC1.88□□□□□ -2.11
LSM1O15116 U2.11-201ENST00000616345 191 ntBASIC1.88□□□□□ -2.11
LSM1O15116 U2.2-201ENST00000616535 191 ntBASIC1.88□□□□□ -2.11
LSM1O15116 AC021755.4-201ENST00000616620 456 ntBASIC1.88□□□□□ -2.11
LSM1O15116 U2.3-201ENST00000617785 191 ntBASIC1.88□□□□□ -2.11
LSM1O15116 U2.19-201ENST00000618602 191 ntBASIC1.88□□□□□ -2.11
LSM1O15116 RNU2-1-201ENST00000618664 191 ntBASIC1.88□□□□□ -2.11
LSM1O15116 U2.6-201ENST00000619225 191 ntBASIC1.88□□□□□ -2.11
LSM1O15116 U2.5-201ENST00000619465 191 ntBASIC1.88□□□□□ -2.11
LSM1O15116 U2.10-201ENST00000620268 191 ntBASIC1.88□□□□□ -2.11
LSM1O15116 AL589994.2-201ENST00000621124 579 ntBASIC1.88□□□□□ -2.11
LSM1O15116 YWHAEP7-203ENST00000622054 312 ntBASIC1.88□□□□□ -2.11
LSM1O15116 MIR219B-201ENST00000637023 88 ntBASIC1.88□□□□□ -2.11
LSM1O15116 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.88□□□□□ -2.11
LSM1O15116 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.88□□□□□ -2.11
LSM1O15116 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
LSM1O15116 MIR449A-201ENST00000362113 91 ntBASIC1.87□□□□□ -2.11
LSM1O15116 RNU6-942P-201ENST00000363002 107 ntBASIC1.87□□□□□ -2.11
LSM1O15116 U3.13-201ENST00000364804 214 ntBASIC1.87□□□□□ -2.11
LSM1O15116 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
LSM1O15116 MIR518A2-201ENST00000384966 87 ntBASIC1.87□□□□□ -2.11
LSM1O15116 RNU2-48P-201ENST00000410694 191 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms