Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.7□□□□□ -1.98
CUX2O14529 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.7□□□□□ -1.98
CUX2O14529 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.7□□□□□ -1.98
CUX2O14529 RPS27P26-201ENST00000494583 239 ntBASIC2.7□□□□□ -1.98
CUX2O14529 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.7□□□□□ -1.98
CUX2O14529 AC020699.1-201ENST00000505161 445 ntBASIC2.7□□□□□ -1.98
CUX2O14529 RNA5SP436-201ENST00000516020 115 ntBASIC2.7□□□□□ -1.98
CUX2O14529 RPPH1-2P-201ENST00000516688 293 ntBASIC2.7□□□□□ -1.98
CUX2O14529 AP000907.2-201ENST00000530827 353 ntBASIC2.7□□□□□ -1.98
CUX2O14529 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.7□□□□□ -1.98
CUX2O14529 AC093012.1-202ENST00000549403 582 ntBASIC2.7□□□□□ -1.98
CUX2O14529 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.7□□□□□ -1.98
CUX2O14529 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.7□□□□□ -1.98
CUX2O14529 AC105148.1-201ENST00000604961 409 ntBASIC2.7□□□□□ -1.98
CUX2O14529 AL136363.1-201ENST00000605349 337 ntBASIC2.7□□□□□ -1.98
CUX2O14529 UCA1.1-201ENST00000620952 75 ntBASIC2.7□□□□□ -1.98
CUX2O14529 AC012640.5-201ENST00000623897 319 ntBASIC2.7□□□□□ -1.98
CUX2O14529 AC008669.1-201ENST00000565823 2178 ntBASIC2.7□□□□□ -1.98
CUX2O14529 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.69□□□□□ -1.98
CUX2O14529 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CUX2O14529 RNU6-217P-201ENST00000384164 104 ntBASIC2.69□□□□□ -1.98
CUX2O14529 MIR517C-201ENST00000385103 95 ntBASIC2.69□□□□□ -1.98
CUX2O14529 RNU6-193P-201ENST00000410977 107 ntBASIC2.69□□□□□ -1.98
CUX2O14529 BTF3L4P3-201ENST00000418879 476 ntBASIC2.69□□□□□ -1.98
CUX2O14529 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.69□□□□□ -1.98
CUX2O14529 ZNF863P-201ENST00000426746 417 ntBASIC2.69□□□□□ -1.98
CUX2O14529 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.69□□□□□ -1.98
CUX2O14529 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.69□□□□□ -1.98
CUX2O14529 HAR1A.1-201ENST00000459583 118 ntBASIC2.69□□□□□ -1.98
CUX2O14529 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.69□□□□□ -1.98
CUX2O14529 RNU4ATAC11P-201ENST00000515939 126 ntBASIC2.69□□□□□ -1.98
CUX2O14529 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.69□□□□□ -1.98
CUX2O14529 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.69□□□□□ -1.98
CUX2O14529 AC021171.1-201ENST00000603137 706 ntBASIC2.69□□□□□ -1.98
CUX2O14529 AC239868.4-201ENST00000608318 671 ntBASIC2.69□□□□□ -1.98
CUX2O14529 AP003399.1-201ENST00000637534 361 ntBASIC2.69□□□□□ -1.98
CUX2O14529 RNU4-28P-201ENST00000364739 141 ntBASIC2.68□□□□□ -1.98
CUX2O14529 RNU6-1080P-201ENST00000383982 107 ntBASIC2.68□□□□□ -1.98
CUX2O14529 RPS24P7-201ENST00000416921 246 ntBASIC2.68□□□□□ -1.98
CUX2O14529 AL354695.1-201ENST00000427935 228 ntBASIC2.68□□□□□ -1.98
CUX2O14529 RPS15AP27-201ENST00000449183 343 ntBASIC2.68□□□□□ -1.98
CUX2O14529 MRPS17P3-201ENST00000465453 385 ntBASIC2.68□□□□□ -1.98
CUX2O14529 AP003461.1-201ENST00000528866 78 ntBASIC2.68□□□□□ -1.98
CUX2O14529 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.68□□□□□ -1.98
CUX2O14529 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.68□□□□□ -1.98
CUX2O14529 ELOCP32-201ENST00000548625 324 ntBASIC2.68□□□□□ -1.98
CUX2O14529 AL133153.1-201ENST00000557756 303 ntBASIC2.68□□□□□ -1.98
CUX2O14529 AC090888.1-201ENST00000561335 1141 ntBASIC2.68□□□□□ -1.98
CUX2O14529 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.68□□□□□ -1.98
CUX2O14529 TUSC7.1-201ENST00000610969 165 ntBASIC2.68□□□□□ -1.98
CUX2O14529 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.68□□□□□ -1.98
CUX2O14529 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
CUX2O14529 MIR19A-201ENST00000384878 82 ntBASIC2.67□□□□□ -1.98
CUX2O14529 MIR767-201ENST00000390228 109 ntBASIC2.67□□□□□ -1.98
CUX2O14529 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC2.67□□□□□ -1.98
CUX2O14529 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.67□□□□□ -1.98
CUX2O14529 Z96811.1-201ENST00000445880 108 ntBASIC2.67□□□□□ -1.98
CUX2O14529 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.67□□□□□ -1.98
CUX2O14529 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.67□□□□□ -1.98
CUX2O14529 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.67□□□□□ -1.98
CUX2O14529 AC108078.1-201ENST00000508073 725 ntBASIC2.67□□□□□ -1.98
CUX2O14529 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.67□□□□□ -1.98
CUX2O14529 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.67□□□□□ -1.98
CUX2O14529 RNU6-415P-201ENST00000516252 97 ntBASIC2.67□□□□□ -1.98
CUX2O14529 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.67□□□□□ -1.98
CUX2O14529 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.67□□□□□ -1.98
CUX2O14529 AC013828.2-201ENST00000532487 235 ntBASIC2.67□□□□□ -1.98
CUX2O14529 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.67□□□□□ -1.98
CUX2O14529 HSPE1P20-201ENST00000538133 289 ntBASIC2.67□□□□□ -1.98
CUX2O14529 UBE2L4-201ENST00000587688 464 ntBASIC2.67□□□□□ -1.98
CUX2O14529 MTND4LP5-201ENST00000605152 292 ntBASIC2.67□□□□□ -1.98
CUX2O14529 AC013244.3-201ENST00000605614 388 ntBASIC2.67□□□□□ -1.98
CUX2O14529 AC096772.1-201ENST00000609146 564 ntBASIC2.67□□□□□ -1.98
CUX2O14529 AL050303.3-201ENST00000613704 284 ntBASIC2.67□□□□□ -1.98
CUX2O14529 AC021755.4-201ENST00000616620 456 ntBASIC2.67□□□□□ -1.98
CUX2O14529 AC012150.2-201ENST00000621300 544 ntBASIC2.67□□□□□ -1.98
CUX2O14529 AL158801.5-201ENST00000623123 465 ntBASIC2.67□□□□□ -1.98
CUX2O14529 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.67□□□□□ -1.98
CUX2O14529 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CUX2O14529 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CUX2O14529 Y_RNA.18-201ENST00000362461 102 ntBASIC2.66□□□□□ -1.98
CUX2O14529 RNU6-433P-201ENST00000363216 104 ntBASIC2.66□□□□□ -1.98
CUX2O14529 RNU6-1180P-201ENST00000364935 107 ntBASIC2.66□□□□□ -1.98
CUX2O14529 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.66□□□□□ -1.98
CUX2O14529 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.66□□□□□ -1.98
CUX2O14529 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.66□□□□□ -1.98
CUX2O14529 VPS26BP1-201ENST00000417155 755 ntBASIC2.66□□□□□ -1.98
CUX2O14529 SUMO1P4-201ENST00000429430 302 ntBASIC2.66□□□□□ -1.98
CUX2O14529 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.66□□□□□ -1.98
CUX2O14529 RPS3AP22-201ENST00000488297 769 ntBASIC2.66□□□□□ -1.98
CUX2O14529 MTND5P13-201ENST00000513046 1079 ntBASIC2.66□□□□□ -1.98
CUX2O14529 RNA5SP337-201ENST00000517007 109 ntBASIC2.66□□□□□ -1.98
CUX2O14529 RNA5SP290-201ENST00000517133 127 ntBASIC2.66□□□□□ -1.98
CUX2O14529 AC087373.1-201ENST00000524920 491 ntBASIC2.66□□□□□ -1.98
CUX2O14529 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.66□□□□□ -1.98
CUX2O14529 7SK.7-201ENST00000603504 247 ntBASIC2.66□□□□□ -1.98
CUX2O14529 AL355877.2-201ENST00000603670 358 ntBASIC2.66□□□□□ -1.98
CUX2O14529 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CUX2O14529 AC107952.2-201ENST00000606048 486 ntBASIC2.66□□□□□ -1.98
CUX2O14529 AC097655.1-201ENST00000635075 318 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms