Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AL356867.1-201ENST00000429623 299 ntBASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 RPS24P1-201ENST00000438550 371 ntBASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 AL714022.1-201ENST00000439897 151 ntBASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 PIGFP3-201ENST00000441918 722 ntBASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 MTCYBP1-201ENST00000454315 1119 ntBASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 SNRPFP4-201ENST00000456366 242 ntBASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 MTCO2P29-201ENST00000465212 189 ntBASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 RPS15AP34-201ENST00000487776 387 ntBASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 RPL38P4-201ENST00000502376 214 ntBASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC116337.1-201ENST00000509680 687 ntBASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNU6-928P-201ENST00000516876 104 ntBASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC025755.1-201ENST00000521306 278 ntBASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC006362.1-201ENST00000567392 174 ntBASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 MIR5002-201ENST00000584713 97 ntBASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC064872.1-201ENST00000604823 1072 ntBASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 RN7SKP299-201ENST00000606679 301 ntBASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC098614.4-201ENST00000607601 462 ntBASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC110079.1-202ENST00000635213 138 ntBASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC090582.1-201ENST00000636321 199 ntBASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 OR5H6-203ENST00000642105 978 ntBASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 AL137003.2-201ENST00000606924 2538 ntBASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNU6-960P-201ENST00000364056 120 ntBASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNU6-188P-201ENST00000364207 107 ntBASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNA5SP160-201ENST00000364866 120 ntBASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 RN7SKP226-201ENST00000364912 300 ntBASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNU6-701P-201ENST00000384059 107 ntBASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNU1-52P-201ENST00000384190 164 ntBASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 SNORA26.9-201ENST00000391322 122 ntBASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 NDUFS5P1-201ENST00000405668 289 ntBASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNU2-62P-201ENST00000410868 191 ntBASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 CDK8P2-201ENST00000415020 547 ntBASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 RPS15AP12-201ENST00000419498 388 ntBASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 AL445646.1-201ENST00000431784 216 ntBASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 Z82210.1-201ENST00000440037 231 ntBASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC244505.5-201ENST00000443639 207 ntBASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 SNRPGP6-201ENST00000451124 220 ntBASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNU6-420P-201ENST00000458780 107 ntBASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 NDUFB4P2-201ENST00000509515 391 ntBASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 MTCO3P28-201ENST00000513351 515 ntBASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNU6-390P-201ENST00000516259 103 ntBASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNU6-840P-201ENST00000517275 65 ntBASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC090572.1-201ENST00000519251 160 ntBASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 AP001804.3-201ENST00000525146 880 ntBASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC024619.4-201ENST00000580924 316 ntBASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 MIR5694-201ENST00000581190 76 ntBASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 MIR3616-201ENST00000584070 92 ntBASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 AP002360.4-201ENST00000606980 481 ntBASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC013562.2-201ENST00000611632 603 ntBASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC010678.1-201ENST00000614118 713 ntBASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC108479.2-201ENST00000617314 601 ntBASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 AL449363.1-201ENST00000617815 186 ntBASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC048344.4-201ENST00000619744 527 ntBASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.06□□□□□ -2.08
TMX2-CTNND1H3BSU7 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 SNORD56.2-201ENST00000363242 71 ntBASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 Y_RNA.359-201ENST00000365498 102 ntBASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNU6-741P-201ENST00000383889 107 ntBASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 MIR764-201ENST00000390811 85 ntBASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC016907.1-201ENST00000419483 435 ntBASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 MTCO2P34-201ENST00000421994 607 ntBASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 ISCA1P1-201ENST00000426679 387 ntBASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 DPPA3P1-201ENST00000448050 469 ntBASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC079448.1-201ENST00000449377 373 ntBASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 MTND2P24-201ENST00000453434 806 ntBASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 FABP5P15-201ENST00000453566 214 ntBASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 AL139109.1-201ENST00000455491 297 ntBASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNU6-956P-201ENST00000458868 103 ntBASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 MTND4LP3-201ENST00000468320 276 ntBASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC105252.1-201ENST00000503089 286 ntBASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms