Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.28□□□□□ -2.36
CPSF4LA6NMK7 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC0.28□□□□□ -2.36
CPSF4LA6NMK7 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.28□□□□□ -2.36
CPSF4LA6NMK7 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.28□□□□□ -2.36
CPSF4LA6NMK7 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.28□□□□□ -2.36
CPSF4LA6NMK7 AC069304.2-201ENST00000605154 435 ntBASIC0.28□□□□□ -2.36
CPSF4LA6NMK7 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.28□□□□□ -2.36
CPSF4LA6NMK7 AC068787.1-201ENST00000623908 691 ntBASIC0.28□□□□□ -2.36
CPSF4LA6NMK7 AC099654.5-201ENST00000636479 350 ntBASIC0.28□□□□□ -2.36
CPSF4LA6NMK7 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.28□□□□□ -2.36
CPSF4LA6NMK7 DDX43P2-201ENST00000604753 1354 ntBASIC0.28□□□□□ -2.36
CPSF4LA6NMK7 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.37
CPSF4LA6NMK7 AC134026.1-201ENST00000623249 2239 ntBASIC0.28□□□□□ -2.37
CPSF4LA6NMK7 HAUS6P2-201ENST00000433254 2404 ntBASIC0.27□□□□□ -2.37
CPSF4LA6NMK7 SNORA50A-201ENST00000384225 134 ntBASIC0.27□□□□□ -2.37
CPSF4LA6NMK7 AL139098.1-201ENST00000407291 389 ntBASIC0.27□□□□□ -2.37
CPSF4LA6NMK7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.27□□□□□ -2.37
CPSF4LA6NMK7 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.27□□□□□ -2.37
CPSF4LA6NMK7 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.27□□□□□ -2.37
CPSF4LA6NMK7 AL512637.2-201ENST00000431287 1256 ntBASIC0.27□□□□□ -2.37
CPSF4LA6NMK7 AP001324.2-201ENST00000461163 319 ntBASIC0.27□□□□□ -2.37
CPSF4LA6NMK7 AC010409.1-201ENST00000487382 476 ntBASIC0.27□□□□□ -2.37
CPSF4LA6NMK7 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.27□□□□□ -2.37
CPSF4LA6NMK7 RN7SKP49-201ENST00000516675 260 ntBASIC0.27□□□□□ -2.37
CPSF4LA6NMK7 SNORD19.2-201ENST00000516978 73 ntBASIC0.27□□□□□ -2.37
CPSF4LA6NMK7 NRON-201ENST00000517270 370 ntBASIC0.27□□□□□ -2.37
CPSF4LA6NMK7 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.27□□□□□ -2.37
CPSF4LA6NMK7 AC006199.1-201ENST00000548728 219 ntBASIC0.27□□□□□ -2.37
CPSF4LA6NMK7 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.27□□□□□ -2.37
CPSF4LA6NMK7 LINC00557-201ENST00000563184 1279 ntBASIC0.27□□□□□ -2.37
CPSF4LA6NMK7 BNIP3P23-201ENST00000599655 511 ntBASIC0.27□□□□□ -2.37
CPSF4LA6NMK7 ELOCP5-201ENST00000604924 333 ntBASIC0.27□□□□□ -2.37
CPSF4LA6NMK7 AC243829.6-201ENST00000612652 106 ntBASIC0.27□□□□□ -2.37
CPSF4LA6NMK7 MIR6513-201ENST00000621188 64 ntBASIC0.27□□□□□ -2.37
CPSF4LA6NMK7 MIR8063-201ENST00000621930 81 ntBASIC0.27□□□□□ -2.37
CPSF4LA6NMK7 AL442644.1-201ENST00000454390 3105 ntBASIC0.27□□□□□ -2.37
CPSF4LA6NMK7 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.27□□□□□ -2.37
CPSF4LA6NMK7 AL138713.1-201ENST00000624026 2130 ntBASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 RNU6-1164P-201ENST00000364428 107 ntBASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 RNU6-16P-201ENST00000384385 107 ntBASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 MIR608-201ENST00000384820 100 ntBASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 AL109755.1-201ENST00000401791 649 ntBASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 RNU2-48P-201ENST00000410694 191 ntBASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 LINC01347-201ENST00000417964 355 ntBASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 RPP40P1-201ENST00000426762 456 ntBASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 AC087477.1-201ENST00000465747 340 ntBASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 HMGN2P9-201ENST00000476875 229 ntBASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 RNU6-496P-201ENST00000516145 99 ntBASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 RNVU1-2-201ENST00000516326 135 ntBASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 AC006518.2-201ENST00000542513 940 ntBASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 AC091152.3-201ENST00000604227 325 ntBASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 AL022345.2-201ENST00000606307 135 ntBASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 BX284668.6-201ENST00000606899 438 ntBASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 AC092953.2-201ENST00000608000 699 ntBASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 AC009229.3-201ENST00000608056 282 ntBASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 AC016542.1-201ENST00000608259 493 ntBASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
CPSF4LA6NMK7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.25□□□□□ -2.37
CPSF4LA6NMK7 Z75746.1-201ENST00000440243 2080 ntBASIC0.25□□□□□ -2.37
CPSF4LA6NMK7 Y_RNA.224-201ENST00000364308 111 ntBASIC0.25□□□□□ -2.37
CPSF4LA6NMK7 RNU1-133P-201ENST00000364867 167 ntBASIC0.25□□□□□ -2.37
CPSF4LA6NMK7 SNORA25-201ENST00000384384 134 ntBASIC0.25□□□□□ -2.37
CPSF4LA6NMK7 RPL21P1-201ENST00000399532 476 ntBASIC0.25□□□□□ -2.37
CPSF4LA6NMK7 THAP5P1-201ENST00000439089 262 ntBASIC0.25□□□□□ -2.37
CPSF4LA6NMK7 UBE2V1P5-201ENST00000440070 405 ntBASIC0.25□□□□□ -2.37
CPSF4LA6NMK7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.25□□□□□ -2.37
CPSF4LA6NMK7 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
CPSF4LA6NMK7 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.25□□□□□ -2.37
CPSF4LA6NMK7 RNU6-405P-201ENST00000516637 110 ntBASIC0.25□□□□□ -2.37
CPSF4LA6NMK7 RNU4-18P-201ENST00000516751 149 ntBASIC0.25□□□□□ -2.37
CPSF4LA6NMK7 RNU6-467P-201ENST00000517027 110 ntBASIC0.25□□□□□ -2.37
CPSF4LA6NMK7 RNU6-1223P-201ENST00000517124 104 ntBASIC0.25□□□□□ -2.37
CPSF4LA6NMK7 RNU6-667P-201ENST00000517186 102 ntBASIC0.25□□□□□ -2.37
CPSF4LA6NMK7 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.25□□□□□ -2.37
CPSF4LA6NMK7 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.25□□□□□ -2.37
CPSF4LA6NMK7 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC0.25□□□□□ -2.37
CPSF4LA6NMK7 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.25□□□□□ -2.37
CPSF4LA6NMK7 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 RNU1-58P-201ENST00000362413 163 ntBASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 MIR499A-201ENST00000384903 122 ntBASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 MIR1267-201ENST00000408723 78 ntBASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 AC114482.1-201ENST00000418010 247 ntBASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 RPS26P5-201ENST00000418544 335 ntBASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 EIF1P1-201ENST00000421436 341 ntBASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 AC018630.2-202ENST00000422992 927 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms