Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
MBD3L4A6NDZ8 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
MBD3L4A6NDZ8 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 CDC27P3-201ENST00000635418 1910 ntBASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 Y_RNA.151-201ENST00000363566 112 ntBASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 Y_RNA.259-201ENST00000364619 101 ntBASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 RNU6-593P-201ENST00000364716 112 ntBASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 Y_RNA.460-201ENST00000384255 102 ntBASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 RNU6-790P-201ENST00000384479 105 ntBASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 MIR517A-201ENST00000385001 87 ntBASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 MIR513A2-201ENST00000385249 127 ntBASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 RNU2-49P-201ENST00000410666 184 ntBASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 RNU6-325P-201ENST00000411132 105 ntBASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 AL030996.1-201ENST00000411430 235 ntBASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 AC245054.2-201ENST00000415639 319 ntBASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 AC087650.1-201ENST00000431445 468 ntBASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 HIGD1AP11-201ENST00000438361 280 ntBASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 NIPA2P5-201ENST00000452282 464 ntBASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 RNU6-1037P-201ENST00000459571 107 ntBASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 SNORA31.21-201ENST00000517180 77 ntBASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 AC006199.1-201ENST00000548728 219 ntBASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 TRAV32-201ENST00000553993 340 ntBASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 XIST_intron.1-201ENST00000619444 68 ntBASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 AC090574.1-201ENST00000623186 233 ntBASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 MTND4LP32-201ENST00000636111 270 ntBASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 AP000553.6-201ENST00000641242 118 ntBASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
MBD3L4A6NDZ8 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 MAPK10-373ENST00000641983 6772 ntBASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 RNU6-527P-201ENST00000363425 104 ntBASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 RPS20P15-201ENST00000412792 311 ntBASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 MTCO2P27-201ENST00000420740 428 ntBASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 CYCSP4-201ENST00000429682 331 ntBASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 AC097713.2-201ENST00000430199 356 ntBASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 ATP5HP2-201ENST00000433885 485 ntBASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 PCMTD1P1-201ENST00000455560 355 ntBASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 SNORA43.2-201ENST00000516652 128 ntBASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 AC022634.1-201ENST00000520765 532 ntBASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 AC010186.2-204ENST00000537668 439 ntBASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 MIR4644-201ENST00000579929 84 ntBASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 MIR3922-201ENST00000585192 84 ntBASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 AC124303.1-201ENST00000605703 360 ntBASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 AC019193.3-201ENST00000609144 554 ntBASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 U4.7-201ENST00000638126 106 ntBASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 ZNF962P-201ENST00000443465 3140 ntBASIC3.28□□□□□ -1.88
MBD3L4A6NDZ8 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.27□□□□□ -1.89
MBD3L4A6NDZ8 AL049781.1-201ENST00000623195 3585 ntBASIC3.27□□□□□ -1.89
MBD3L4A6NDZ8 MTND5P1-201ENST00000445440 1375 ntBASIC3.27□□□□□ -1.89
MBD3L4A6NDZ8 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
MBD3L4A6NDZ8 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.27□□□□□ -1.89
MBD3L4A6NDZ8 MIR218-2-201ENST00000385006 110 ntBASIC3.27□□□□□ -1.89
MBD3L4A6NDZ8 RNU6-328P-201ENST00000390887 106 ntBASIC3.27□□□□□ -1.89
MBD3L4A6NDZ8 RNU1-101P-201ENST00000391171 127 ntBASIC3.27□□□□□ -1.89
MBD3L4A6NDZ8 FTH1P15-201ENST00000406984 280 ntBASIC3.27□□□□□ -1.89
MBD3L4A6NDZ8 SNORA11.2-201ENST00000408318 127 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms