Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.66□□□□□ -2.3
TCRBV3S1A0A5B6 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.66□□□□□ -2.3
TCRBV3S1A0A5B6 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.66□□□□□ -2.3
TCRBV3S1A0A5B6 CENPUP1-201ENST00000526649 1202 ntBASIC0.66□□□□□ -2.3
TCRBV3S1A0A5B6 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.66□□□□□ -2.3
TCRBV3S1A0A5B6 ADAM3B-201ENST00000569937 840 ntBASIC0.66□□□□□ -2.3
TCRBV3S1A0A5B6 MIR3973-201ENST00000579824 107 ntBASIC0.66□□□□□ -2.3
TCRBV3S1A0A5B6 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.66□□□□□ -2.3
TCRBV3S1A0A5B6 CYP2C61P-201ENST00000604072 290 ntBASIC0.66□□□□□ -2.3
TCRBV3S1A0A5B6 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.66□□□□□ -2.3
TCRBV3S1A0A5B6 ATM-230ENST00000640388 578 ntTSL 5 BASIC0.66□□□□□ -2.3
TCRBV3S1A0A5B6 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.65□□□□□ -2.31
TCRBV3S1A0A5B6 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
TCRBV3S1A0A5B6 SNORD56.4-201ENST00000363883 71 ntBASIC0.65□□□□□ -2.31
TCRBV3S1A0A5B6 SNORD1A-201ENST00000364968 72 ntBASIC0.65□□□□□ -2.31
TCRBV3S1A0A5B6 RNU6-611P-201ENST00000384276 104 ntBASIC0.65□□□□□ -2.31
TCRBV3S1A0A5B6 SNORD14D-201ENST00000384390 87 ntBASIC0.65□□□□□ -2.31
TCRBV3S1A0A5B6 MIR217-201ENST00000384817 110 ntBASIC0.65□□□□□ -2.31
TCRBV3S1A0A5B6 AL139397.2-201ENST00000404529 772 ntBASIC0.65□□□□□ -2.31
TCRBV3S1A0A5B6 MTATP6P27-201ENST00000416987 621 ntBASIC0.65□□□□□ -2.31
TCRBV3S1A0A5B6 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0.65□□□□□ -2.31
TCRBV3S1A0A5B6 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.65□□□□□ -2.31
TCRBV3S1A0A5B6 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
TCRBV3S1A0A5B6 USP9YP22-201ENST00000438971 294 ntBASIC0.65□□□□□ -2.31
TCRBV3S1A0A5B6 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.65□□□□□ -2.31
TCRBV3S1A0A5B6 COX6CP14-201ENST00000469580 174 ntBASIC0.65□□□□□ -2.31
TCRBV3S1A0A5B6 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.65□□□□□ -2.31
TCRBV3S1A0A5B6 AC008628.1-201ENST00000508663 265 ntBASIC0.65□□□□□ -2.31
TCRBV3S1A0A5B6 SNORA31.17-201ENST00000516953 127 ntBASIC0.65□□□□□ -2.31
TCRBV3S1A0A5B6 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.65□□□□□ -2.31
TCRBV3S1A0A5B6 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.65□□□□□ -2.31
TCRBV3S1A0A5B6 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.65□□□□□ -2.31
TCRBV3S1A0A5B6 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.65□□□□□ -2.31
TCRBV3S1A0A5B6 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC0.65□□□□□ -2.31
TCRBV3S1A0A5B6 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.65□□□□□ -2.31
TCRBV3S1A0A5B6 AC098826.3-201ENST00000603823 466 ntBASIC0.65□□□□□ -2.31
TCRBV3S1A0A5B6 AC097468.3-201ENST00000607956 456 ntBASIC0.65□□□□□ -2.31
TCRBV3S1A0A5B6 AL391813.2-201ENST00000609113 322 ntBASIC0.65□□□□□ -2.31
TCRBV3S1A0A5B6 AL078604.3-201ENST00000615580 211 ntBASIC0.65□□□□□ -2.31
TCRBV3S1A0A5B6 AC017037.3-201ENST00000625016 472 ntBASIC0.65□□□□□ -2.31
TCRBV3S1A0A5B6 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
TCRBV3S1A0A5B6 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 RNU6-658P-201ENST00000384606 106 ntBASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 AL133475.1-201ENST00000404414 305 ntBASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 RNU2-68P-201ENST00000410878 191 ntBASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 TPMTP3-201ENST00000411928 735 ntBASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 CR848007.2-201ENST00000424918 787 ntBASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 CST2P1-201ENST00000425770 87 ntBASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 AC108667.1-201ENST00000428618 249 ntBASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 RPS15AP9-201ENST00000439856 381 ntBASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 AC027119.1-201ENST00000440877 241 ntBASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 AC010095.1-201ENST00000443543 144 ntBASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 AC245102.2-201ENST00000448956 180 ntBASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 AC026410.2-201ENST00000460281 156 ntBASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 RPL21P47-201ENST00000483696 477 ntBASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 RPS3AP22-201ENST00000488297 769 ntBASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 AC109927.2-201ENST00000506416 303 ntBASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 AC010460.2-201ENST00000509054 677 ntBASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 PTP4A1P4-201ENST00000512479 322 ntBASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 SNORA31.16-201ENST00000516773 139 ntBASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 VN1R107P-201ENST00000601784 209 ntBASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 AL139344.1-201ENST00000605228 195 ntBASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 AL020996.3-201ENST00000606617 222 ntBASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 AL022345.1-201ENST00000607292 135 ntBASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 MIR1264-201ENST00000616374 69 ntBASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
TCRBV3S1A0A5B6 AL391987.6-201ENST00000305671 199 ntBASIC0.63□□□□□ -2.31
TCRBV3S1A0A5B6 NACAP2-201ENST00000318548 624 ntBASIC0.63□□□□□ -2.31
TCRBV3S1A0A5B6 RNU6-637P-201ENST00000384050 107 ntBASIC0.63□□□□□ -2.31
TCRBV3S1A0A5B6 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.63□□□□□ -2.31
TCRBV3S1A0A5B6 USP9YP26-201ENST00000421008 661 ntBASIC0.63□□□□□ -2.31
TCRBV3S1A0A5B6 AL606490.4-201ENST00000423117 127 ntBASIC0.63□□□□□ -2.31
TCRBV3S1A0A5B6 AC139712.2-201ENST00000424302 339 ntBASIC0.63□□□□□ -2.31
TCRBV3S1A0A5B6 AC008267.5-201ENST00000424928 265 ntBASIC0.63□□□□□ -2.31
TCRBV3S1A0A5B6 USP9YP18-201ENST00000425912 695 ntBASIC0.63□□□□□ -2.31
TCRBV3S1A0A5B6 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.63□□□□□ -2.31
TCRBV3S1A0A5B6 UBE2V2P3-201ENST00000433562 437 ntBASIC0.63□□□□□ -2.31
TCRBV3S1A0A5B6 AC002542.1-201ENST00000440683 193 ntBASIC0.63□□□□□ -2.31
TCRBV3S1A0A5B6 USP9YP17-201ENST00000444617 696 ntBASIC0.63□□□□□ -2.31
TCRBV3S1A0A5B6 AC013267.1-201ENST00000458227 267 ntBASIC0.63□□□□□ -2.31
TCRBV3S1A0A5B6 AP001025.1-201ENST00000486139 332 ntBASIC0.63□□□□□ -2.31
TCRBV3S1A0A5B6 ACA59.2-201ENST00000517061 156 ntBASIC0.63□□□□□ -2.31
TCRBV3S1A0A5B6 AC103833.1-201ENST00000517442 172 ntBASIC0.63□□□□□ -2.31
TCRBV3S1A0A5B6 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.63□□□□□ -2.31
TCRBV3S1A0A5B6 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.63□□□□□ -2.31
TCRBV3S1A0A5B6 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.63□□□□□ -2.31
TCRBV3S1A0A5B6 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.63□□□□□ -2.31
TCRBV3S1A0A5B6 AL355598.1-201ENST00000604169 202 ntBASIC0.63□□□□□ -2.31
TCRBV3S1A0A5B6 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.63□□□□□ -2.31
TCRBV3S1A0A5B6 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.63□□□□□ -2.31
TCRBV3S1A0A5B6 AC091895.1-201ENST00000624494 256 ntBASIC0.63□□□□□ -2.31
TCRBV3S1A0A5B6 AC008163.1-202ENST00000636004 2889 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 153.3 ms