Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 RPL38P4-201ENST00000502376 214 ntBASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 RNU6-914P-201ENST00000516749 109 ntBASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 RNU6-677P-201ENST00000516914 101 ntBASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 RNU6-703P-201ENST00000516946 107 ntBASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 OR1M4P-201ENST00000589199 287 ntBASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 AL590229.1-201ENST00000603497 542 ntBASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 AL355877.2-201ENST00000603670 358 ntBASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 AC090578.1-201ENST00000604955 591 ntBASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 AL121992.2-201ENST00000606262 256 ntBASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 MIRLET7G-201ENST00000362280 84 ntBASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 RNU6-169P-201ENST00000365336 107 ntBASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 SNORA4.3-201ENST00000365564 137 ntBASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 SNORA20.2-201ENST00000383922 131 ntBASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 U3.37-201ENST00000408528 213 ntBASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 ISCA1P6-201ENST00000427740 390 ntBASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 AC098831.1-201ENST00000440661 216 ntBASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 AC093899.1-201ENST00000457984 376 ntBASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 RNA5SP269-201ENST00000459032 137 ntBASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 AC109927.2-201ENST00000506416 303 ntBASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 SNORA31.18-201ENST00000517043 134 ntBASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 COX6CP5-201ENST00000527162 228 ntBASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 SEPT7P9-203ENST00000604116 343 ntBASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 AC064872.1-201ENST00000604823 1072 ntBASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 MIR15A-201ENST00000607334 83 ntBASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 AL589743.7-201ENST00000612637 233 ntBASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 Y_RNA.783-201ENST00000613546 102 ntBASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 AL158063.1-201ENST00000615349 536 ntBASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 MTND4P35-201ENST00000604257 1375 ntBASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
SMIM28A0A1B0GU29 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 NACAP2-201ENST00000318548 624 ntBASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 SNORA68.1-201ENST00000364537 132 ntBASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 SNORA24.1-201ENST00000384401 135 ntBASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 MIR504-201ENST00000385065 83 ntBASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 RNU6-1328P-201ENST00000410938 106 ntBASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 AL031779.1-201ENST00000415663 330 ntBASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 MTND3P17-201ENST00000416968 344 ntBASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 AL109913.1-201ENST00000421173 514 ntBASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 RPL31P35-201ENST00000431058 377 ntBASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 RPL23AP30-201ENST00000432419 501 ntBASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 AL353706.1-201ENST00000436728 494 ntBASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 RNU6-953P-201ENST00000459154 107 ntBASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 TRBV1-201ENST00000476502 284 ntBASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 AC091965.2-201ENST00000512324 613 ntBASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 Y_RNA.689-201ENST00000516589 107 ntBASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 Y_RNA.695-201ENST00000516715 107 ntBASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 SNORA18.6-201ENST00000516792 115 ntBASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 RNU6-1315P-201ENST00000517187 99 ntBASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 AC090572.1-201ENST00000519251 160 ntBASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 AC006199.1-201ENST00000548728 219 ntBASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 MIR3913-1-201ENST00000577744 102 ntBASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 MIR3124-201ENST00000582636 67 ntBASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 MIR3616-201ENST00000584070 92 ntBASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 BNIP3P9-201ENST00000603714 553 ntBASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 AC098614.4-201ENST00000607601 462 ntBASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 AC009318.2-201ENST00000610917 651 ntBASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 AC104237.2-201ENST00000612456 443 ntBASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 AP001506.1-201ENST00000615444 211 ntBASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 AC108479.2-201ENST00000617314 601 ntBASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 FRG1KP-201ENST00000623592 341 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms