Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 RNU6-322P-201ENST00000516010 103 ntBASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 RN7SKP219-201ENST00000516825 296 ntBASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 RNA5SP290-201ENST00000517133 127 ntBASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 AC015712.3-201ENST00000559380 164 ntBASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 AC093519.1-201ENST00000566109 298 ntBASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 AC002545.1-201ENST00000592511 181 ntBASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 AC087045.1-201ENST00000605856 382 ntBASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 AL355472.4-201ENST00000610233 626 ntBASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 AC080188.3-201ENST00000624842 748 ntBASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 ATM-230ENST00000640388 578 ntTSL 5 BASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 AC099063.3-201ENST00000642066 185 ntBASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.5□□□□□ -2.33
TRAV1-2A0A0B4J238 RNU1-39P-201ENST00000383897 165 ntBASIC0.5□□□□□ -2.33
TRAV1-2A0A0B4J238 RNU6-611P-201ENST00000384276 104 ntBASIC0.5□□□□□ -2.33
TRAV1-2A0A0B4J238 RNU6-1005P-201ENST00000384519 107 ntBASIC0.5□□□□□ -2.33
TRAV1-2A0A0B4J238 Y_RNA.548-201ENST00000384656 105 ntBASIC0.5□□□□□ -2.33
TRAV1-2A0A0B4J238 AC069282.1-201ENST00000411911 526 ntBASIC0.5□□□□□ -2.33
TRAV1-2A0A0B4J238 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.5□□□□□ -2.33
TRAV1-2A0A0B4J238 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.5□□□□□ -2.33
TRAV1-2A0A0B4J238 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.5□□□□□ -2.33
TRAV1-2A0A0B4J238 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.5□□□□□ -2.33
TRAV1-2A0A0B4J238 AC092170.1-201ENST00000440211 356 ntBASIC0.5□□□□□ -2.33
TRAV1-2A0A0B4J238 DUXAP8-207ENST00000456786 622 ntBASIC0.5□□□□□ -2.33
TRAV1-2A0A0B4J238 RN7SL429P-201ENST00000479090 223 ntBASIC0.5□□□□□ -2.33
TRAV1-2A0A0B4J238 RN7SL489P-201ENST00000486185 223 ntBASIC0.5□□□□□ -2.33
TRAV1-2A0A0B4J238 RN7SL327P-201ENST00000488659 223 ntBASIC0.5□□□□□ -2.33
TRAV1-2A0A0B4J238 RNU7-40P-201ENST00000516397 64 ntBASIC0.5□□□□□ -2.33
TRAV1-2A0A0B4J238 RNA5SP135-201ENST00000517019 125 ntBASIC0.5□□□□□ -2.33
TRAV1-2A0A0B4J238 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC0.5□□□□□ -2.33
TRAV1-2A0A0B4J238 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.5□□□□□ -2.33
TRAV1-2A0A0B4J238 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.5□□□□□ -2.33
TRAV1-2A0A0B4J238 MIR4653-201ENST00000585107 83 ntBASIC0.5□□□□□ -2.33
TRAV1-2A0A0B4J238 BNIP3P24-201ENST00000593398 557 ntBASIC0.5□□□□□ -2.33
TRAV1-2A0A0B4J238 WISP1-OT1-201ENST00000602893 642 ntBASIC0.5□□□□□ -2.33
TRAV1-2A0A0B4J238 AL158211.4-201ENST00000606988 584 ntBASIC0.5□□□□□ -2.33
TRAV1-2A0A0B4J238 AC004492.1-201ENST00000607036 742 ntBASIC0.5□□□□□ -2.33
TRAV1-2A0A0B4J238 RN7SL853P-201ENST00000617250 223 ntBASIC0.5□□□□□ -2.33
TRAV1-2A0A0B4J238 AC012676.2-201ENST00000619258 186 ntBASIC0.5□□□□□ -2.33
TRAV1-2A0A0B4J238 AC017037.3-201ENST00000625016 472 ntBASIC0.5□□□□□ -2.33
TRAV1-2A0A0B4J238 HSBP1P2-201ENST00000299671 229 ntBASIC0.49□□□□□ -2.33
TRAV1-2A0A0B4J238 SNORA27.3-201ENST00000364937 134 ntBASIC0.49□□□□□ -2.33
TRAV1-2A0A0B4J238 RNU1-36P-201ENST00000365130 165 ntBASIC0.49□□□□□ -2.33
TRAV1-2A0A0B4J238 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.49□□□□□ -2.33
TRAV1-2A0A0B4J238 SNORA18.2-201ENST00000383865 132 ntBASIC0.49□□□□□ -2.33
TRAV1-2A0A0B4J238 RNU6-657P-201ENST00000383904 107 ntBASIC0.49□□□□□ -2.33
TRAV1-2A0A0B4J238 RNU6-733P-201ENST00000410759 104 ntBASIC0.49□□□□□ -2.33
TRAV1-2A0A0B4J238 HMGN1P14-201ENST00000412459 517 ntBASIC0.49□□□□□ -2.33
TRAV1-2A0A0B4J238 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.49□□□□□ -2.33
TRAV1-2A0A0B4J238 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.49□□□□□ -2.33
TRAV1-2A0A0B4J238 AL591043.1-201ENST00000432461 424 ntBASIC0.49□□□□□ -2.33
TRAV1-2A0A0B4J238 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.49□□□□□ -2.33
TRAV1-2A0A0B4J238 RPL7P43-201ENST00000478876 753 ntBASIC0.49□□□□□ -2.33
TRAV1-2A0A0B4J238 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.49□□□□□ -2.33
TRAV1-2A0A0B4J238 AC108078.1-201ENST00000508073 725 ntBASIC0.49□□□□□ -2.33
TRAV1-2A0A0B4J238 RN7SKP265-201ENST00000516448 223 ntBASIC0.49□□□□□ -2.33
TRAV1-2A0A0B4J238 RNU6-885P-201ENST00000516607 104 ntBASIC0.49□□□□□ -2.33
TRAV1-2A0A0B4J238 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
TRAV1-2A0A0B4J238 AP003484.1-201ENST00000530974 250 ntBASIC0.49□□□□□ -2.33
TRAV1-2A0A0B4J238 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.49□□□□□ -2.33
TRAV1-2A0A0B4J238 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.49□□□□□ -2.33
TRAV1-2A0A0B4J238 SUB1P4-201ENST00000566062 339 ntBASIC0.49□□□□□ -2.33
TRAV1-2A0A0B4J238 BBIP1P1-201ENST00000602999 279 ntBASIC0.49□□□□□ -2.33
TRAV1-2A0A0B4J238 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.49□□□□□ -2.33
TRAV1-2A0A0B4J238 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.49□□□□□ -2.33
TRAV1-2A0A0B4J238 AL590396.4-201ENST00000636779 956 ntBASIC0.49□□□□□ -2.33
TRAV1-2A0A0B4J238 DBF4P1-201ENST00000412976 1892 ntBASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 DDX43P2-201ENST00000604753 1354 ntBASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 RNU6-392P-201ENST00000364926 101 ntBASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 MIR1302-8-201ENST00000408342 128 ntBASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 UBE2V1P11-201ENST00000411559 285 ntBASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 NCOR1P3-201ENST00000420479 303 ntBASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 USP9YP26-201ENST00000421008 661 ntBASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 USP9YP18-201ENST00000425912 695 ntBASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 MTCO1P57-201ENST00000432182 261 ntBASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 CALM1P1-201ENST00000442082 433 ntBASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 USP9YP17-201ENST00000444617 696 ntBASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 MTND3P4-201ENST00000453537 303 ntBASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 AC087477.1-201ENST00000465747 340 ntBASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 AC114982.1-201ENST00000469402 321 ntBASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 OR9N1P-202ENST00000494289 481 ntBASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 RNU6-581P-201ENST00000516214 105 ntBASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 AP006587.4-201ENST00000526053 529 ntBASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 AC023824.3-201ENST00000569003 562 ntBASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 AP001004.1-201ENST00000582468 324 ntBASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 AC073544.2-201ENST00000601155 540 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms