Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 Y_RNA.197-201ENST00000364004 102 ntBASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 Y_RNA.530-201ENST00000384587 101 ntBASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 SNORA16.2-201ENST00000390991 127 ntBASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 RPS4XP3-201ENST00000398541 413 ntBASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 AC063979.1-201ENST00000415539 377 ntBASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 MTCO2P27-201ENST00000420740 428 ntBASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 HMGN2P20-201ENST00000437531 273 ntBASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 AL137792.2-201ENST00000443484 235 ntBASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 RPL32P28-201ENST00000443577 397 ntBASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 FABP5P15-201ENST00000453566 214 ntBASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 PPP1R2P5-201ENST00000457256 603 ntBASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 U3.44-201ENST00000458938 192 ntBASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 AL135752.1-201ENST00000479477 471 ntBASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 RPL21P93-201ENST00000480465 489 ntBASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 MTCO1P29-201ENST00000496868 288 ntBASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 SUMO2P6-201ENST00000505273 288 ntBASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 RNU6-189P-201ENST00000516120 101 ntBASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 RNU6-1315P-201ENST00000517187 99 ntBASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 AL117187.1-201ENST00000555482 181 ntBASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 MIR4474-201ENST00000579189 78 ntBASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 MIR5692A1-201ENST00000580523 69 ntBASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 AC092747.3-201ENST00000603769 301 ntBASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 U2.17-201ENST00000611454 95 ntBASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 AC087588.2-201ENST00000617667 426 ntBASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 AC103705.1-201ENST00000619013 241 ntBASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 PLCE1P1-201ENST00000622094 305 ntBASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 AC092628.2-201ENST00000622492 339 ntBASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 AP003355.3-201ENST00000623465 114 ntBASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.41□□□□□ -1.86
CCDC187A0A096LP49 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.4□□□□□ -1.86
CCDC187A0A096LP49 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.4□□□□□ -1.86
CCDC187A0A096LP49 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 Y_RNA.167-201ENST00000363735 109 ntBASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 Y_RNA.193-201ENST00000363979 102 ntBASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 RNU6-371P-201ENST00000364283 108 ntBASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 Y_RNA.452-201ENST00000384202 108 ntBASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 RNU6-45P-201ENST00000384471 107 ntBASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 SNORA1.3-201ENST00000384676 136 ntBASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 SNORA48.2-201ENST00000390926 124 ntBASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 BX682237.1-201ENST00000415016 335 ntBASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 AC005300.1-201ENST00000428401 373 ntBASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 MTCYBP9-201ENST00000431021 303 ntBASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 HMGB3P8-201ENST00000449709 577 ntBASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 AC115115.1-201ENST00000449927 248 ntBASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 RNU7-167P-201ENST00000459160 62 ntBASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 AL049830.2-201ENST00000480072 201 ntBASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 HIGD1AP13-201ENST00000509878 289 ntBASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 PTP4A1P4-201ENST00000512479 322 ntBASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 RNU2-69P-201ENST00000516061 100 ntBASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 AC004817.2-201ENST00000561794 651 ntBASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 MIR1273C-201ENST00000578669 77 ntBASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 MIR3941-201ENST00000582572 103 ntBASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 MIR548AC-201ENST00000585049 88 ntBASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 BNIP3P25-201ENST00000596023 559 ntBASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 7SK.7-201ENST00000603504 247 ntBASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 AC007938.3-201ENST00000604965 623 ntBASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 AP000654.2-201ENST00000605633 586 ntBASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 AC090425.1-201ENST00000610007 140 ntBASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 MIR6076-201ENST00000617521 113 ntBASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 XIST_intron.1-201ENST00000619444 68 ntBASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 MIR8057-201ENST00000620957 69 ntBASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 AC022418.1-201ENST00000624118 445 ntBASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 AL359693.1-201ENST00000614959 2407 ntBASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC187A0A096LP49 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC187A0A096LP49 AL049641.1-201ENST00000441055 1948 ntBASIC3.39□□□□□ -1.87
CCDC187A0A096LP49 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC187A0A096LP49 Y_RNA.28-201ENST00000362554 111 ntBASIC3.39□□□□□ -1.87
CCDC187A0A096LP49 Y_RNA.401-201ENST00000383965 117 ntBASIC3.39□□□□□ -1.87
CCDC187A0A096LP49 RNA5SP219-201ENST00000390940 113 ntBASIC3.39□□□□□ -1.87
CCDC187A0A096LP49 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC187A0A096LP49 RPL7P10-201ENST00000417407 739 ntBASIC3.39□□□□□ -1.87
CCDC187A0A096LP49 DBIP2-201ENST00000419076 262 ntBASIC3.39□□□□□ -1.87
CCDC187A0A096LP49 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC187A0A096LP49 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC187A0A096LP49 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms