Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AL121578.1-201ENST00000428051 892 ntBASIC0.83□□□□□ -2.28
HLA-DRB4X5D2U9 AC092473.1-201ENST00000441098 221 ntBASIC0.83□□□□□ -2.28
HLA-DRB4X5D2U9 HMGN2P18-201ENST00000450680 270 ntBASIC0.83□□□□□ -2.28
HLA-DRB4X5D2U9 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.83□□□□□ -2.28
HLA-DRB4X5D2U9 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.83□□□□□ -2.28
HLA-DRB4X5D2U9 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.83□□□□□ -2.28
HLA-DRB4X5D2U9 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.83□□□□□ -2.28
HLA-DRB4X5D2U9 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.83□□□□□ -2.28
HLA-DRB4X5D2U9 MTCYBP16-201ENST00000509187 1129 ntBASIC0.83□□□□□ -2.28
HLA-DRB4X5D2U9 AC025465.3-201ENST00000510570 311 ntBASIC0.83□□□□□ -2.28
HLA-DRB4X5D2U9 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.83□□□□□ -2.28
HLA-DRB4X5D2U9 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.83□□□□□ -2.28
HLA-DRB4X5D2U9 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.83□□□□□ -2.28
HLA-DRB4X5D2U9 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.83□□□□□ -2.28
HLA-DRB4X5D2U9 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.83□□□□□ -2.28
HLA-DRB4X5D2U9 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.83□□□□□ -2.28
HLA-DRB4X5D2U9 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.83□□□□□ -2.28
HLA-DRB4X5D2U9 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.83□□□□□ -2.28
HLA-DRB4X5D2U9 AC073544.2-201ENST00000601155 540 ntBASIC0.83□□□□□ -2.28
HLA-DRB4X5D2U9 BBIP1P1-201ENST00000602999 279 ntBASIC0.83□□□□□ -2.28
HLA-DRB4X5D2U9 AC087045.1-201ENST00000605856 382 ntBASIC0.83□□□□□ -2.28
HLA-DRB4X5D2U9 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.83□□□□□ -2.28
HLA-DRB4X5D2U9 AL121890.5-201ENST00000620848 304 ntBASIC0.83□□□□□ -2.28
HLA-DRB4X5D2U9 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.83□□□□□ -2.28
HLA-DRB4X5D2U9 AC132825.7-201ENST00000638744 335 ntBASIC0.83□□□□□ -2.28
HLA-DRB4X5D2U9 OR5T3-201ENST00000303059 1023 ntBASIC0.82□□□□□ -2.28
HLA-DRB4X5D2U9 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.82□□□□□ -2.28
HLA-DRB4X5D2U9 RNU6-271P-201ENST00000363858 105 ntBASIC0.82□□□□□ -2.28
HLA-DRB4X5D2U9 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
HLA-DRB4X5D2U9 RPL23AP36-201ENST00000413895 458 ntBASIC0.82□□□□□ -2.28
HLA-DRB4X5D2U9 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0.82□□□□□ -2.28
HLA-DRB4X5D2U9 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.82□□□□□ -2.28
HLA-DRB4X5D2U9 RPS15AP9-201ENST00000439856 381 ntBASIC0.82□□□□□ -2.28
HLA-DRB4X5D2U9 AC092001.1-201ENST00000453012 261 ntBASIC0.82□□□□□ -2.28
HLA-DRB4X5D2U9 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.82□□□□□ -2.28
HLA-DRB4X5D2U9 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.82□□□□□ -2.28
HLA-DRB4X5D2U9 AC013267.1-201ENST00000458227 267 ntBASIC0.82□□□□□ -2.28
HLA-DRB4X5D2U9 MEMO1P3-201ENST00000459811 302 ntBASIC0.82□□□□□ -2.28
HLA-DRB4X5D2U9 AC026410.2-201ENST00000460281 156 ntBASIC0.82□□□□□ -2.28
HLA-DRB4X5D2U9 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.82□□□□□ -2.28
HLA-DRB4X5D2U9 AC010460.2-201ENST00000509054 677 ntBASIC0.82□□□□□ -2.28
HLA-DRB4X5D2U9 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC0.82□□□□□ -2.28
HLA-DRB4X5D2U9 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.82□□□□□ -2.28
HLA-DRB4X5D2U9 AP003122.4-201ENST00000530980 758 ntBASIC0.82□□□□□ -2.28
HLA-DRB4X5D2U9 MRPS36P5-201ENST00000551909 298 ntBASIC0.82□□□□□ -2.28
HLA-DRB4X5D2U9 AC002400.1-201ENST00000569310 726 ntBASIC0.82□□□□□ -2.28
HLA-DRB4X5D2U9 AC090615.1-201ENST00000577519 154 ntBASIC0.82□□□□□ -2.28
HLA-DRB4X5D2U9 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC0.82□□□□□ -2.28
HLA-DRB4X5D2U9 HSPE1P19-201ENST00000603327 295 ntBASIC0.82□□□□□ -2.28
HLA-DRB4X5D2U9 AL022345.1-201ENST00000607292 135 ntBASIC0.82□□□□□ -2.28
HLA-DRB4X5D2U9 AL355802.3-201ENST00000607571 545 ntBASIC0.82□□□□□ -2.28
HLA-DRB4X5D2U9 MIR1264-201ENST00000616374 69 ntBASIC0.82□□□□□ -2.28
HLA-DRB4X5D2U9 AC097655.1-201ENST00000635075 318 ntBASIC0.82□□□□□ -2.28
HLA-DRB4X5D2U9 TEX21P-201ENST00000447107 1476 ntBASIC0.81□□□□□ -2.28
HLA-DRB4X5D2U9 RNU1-58P-201ENST00000362413 163 ntBASIC0.81□□□□□ -2.28
HLA-DRB4X5D2U9 Y_RNA.327-201ENST00000365201 102 ntBASIC0.81□□□□□ -2.28
HLA-DRB4X5D2U9 MIR513A1-201ENST00000385138 129 ntBASIC0.81□□□□□ -2.28
HLA-DRB4X5D2U9 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.81□□□□□ -2.28
HLA-DRB4X5D2U9 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.81□□□□□ -2.28
HLA-DRB4X5D2U9 Z82205.1-201ENST00000428456 297 ntBASIC0.81□□□□□ -2.28
HLA-DRB4X5D2U9 AC010153.1-201ENST00000432862 727 ntBASIC0.81□□□□□ -2.28
HLA-DRB4X5D2U9 AL135790.2-201ENST00000437701 267 ntBASIC0.81□□□□□ -2.28
HLA-DRB4X5D2U9 OFD1P3Y-201ENST00000453312 783 ntBASIC0.81□□□□□ -2.28
HLA-DRB4X5D2U9 AC093852.1-201ENST00000503587 266 ntBASIC0.81□□□□□ -2.28
HLA-DRB4X5D2U9 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.81□□□□□ -2.28
HLA-DRB4X5D2U9 RNU6-581P-201ENST00000516214 105 ntBASIC0.81□□□□□ -2.28
HLA-DRB4X5D2U9 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.81□□□□□ -2.28
HLA-DRB4X5D2U9 AC233266.2-201ENST00000567067 528 ntBASIC0.81□□□□□ -2.28
HLA-DRB4X5D2U9 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.81□□□□□ -2.28
HLA-DRB4X5D2U9 BNIP3P27-201ENST00000599991 412 ntBASIC0.81□□□□□ -2.28
HLA-DRB4X5D2U9 AC138627.2-201ENST00000624202 601 ntBASIC0.81□□□□□ -2.28
HLA-DRB4X5D2U9 MFSD8-213ENST00000641134 1327 ntBASIC0.81□□□□□ -2.28
HLA-DRB4X5D2U9 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
HLA-DRB4X5D2U9 MTND5P9-201ENST00000503854 1755 ntBASIC0.8□□□□□ -2.28
HLA-DRB4X5D2U9 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.8□□□□□ -2.28
HLA-DRB4X5D2U9 SNORD56.4-201ENST00000363883 71 ntBASIC0.8□□□□□ -2.28
HLA-DRB4X5D2U9 RNU6-1164P-201ENST00000364428 107 ntBASIC0.8□□□□□ -2.28
HLA-DRB4X5D2U9 RNU6-637P-201ENST00000384050 107 ntBASIC0.8□□□□□ -2.28
HLA-DRB4X5D2U9 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
HLA-DRB4X5D2U9 SNORA48.1-201ENST00000390879 135 ntBASIC0.8□□□□□ -2.28
HLA-DRB4X5D2U9 Y_RNA.595-201ENST00000410403 105 ntBASIC0.8□□□□□ -2.28
HLA-DRB4X5D2U9 RNU2-48P-201ENST00000410694 191 ntBASIC0.8□□□□□ -2.28
HLA-DRB4X5D2U9 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
HLA-DRB4X5D2U9 OR6C66P-201ENST00000414917 930 ntBASIC0.8□□□□□ -2.28
HLA-DRB4X5D2U9 BTF3L4P3-201ENST00000418879 476 ntBASIC0.8□□□□□ -2.28
HLA-DRB4X5D2U9 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.8□□□□□ -2.28
HLA-DRB4X5D2U9 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.8□□□□□ -2.28
HLA-DRB4X5D2U9 AC234064.1-201ENST00000436312 247 ntBASIC0.8□□□□□ -2.28
HLA-DRB4X5D2U9 MTCO1P44-201ENST00000441935 243 ntBASIC0.8□□□□□ -2.28
HLA-DRB4X5D2U9 DYNLT3P2-201ENST00000442517 295 ntBASIC0.8□□□□□ -2.28
HLA-DRB4X5D2U9 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.8□□□□□ -2.28
HLA-DRB4X5D2U9 PRELID3BP1-201ENST00000457142 540 ntBASIC0.8□□□□□ -2.28
HLA-DRB4X5D2U9 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC0.8□□□□□ -2.28
HLA-DRB4X5D2U9 RNU6-775P-201ENST00000459318 96 ntBASIC0.8□□□□□ -2.28
HLA-DRB4X5D2U9 RPS26P55-201ENST00000471178 356 ntBASIC0.8□□□□□ -2.28
HLA-DRB4X5D2U9 RPL30P7-201ENST00000479312 323 ntBASIC0.8□□□□□ -2.28
HLA-DRB4X5D2U9 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.8□□□□□ -2.28
HLA-DRB4X5D2U9 RNU6-703P-201ENST00000516946 107 ntBASIC0.8□□□□□ -2.28
HLA-DRB4X5D2U9 RNU6-586P-201ENST00000517265 104 ntBASIC0.8□□□□□ -2.28
HLA-DRB4X5D2U9 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms