Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 MRPS18CP4-201ENST00000535821 231 ntBASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 CYCSP40-201ENST00000575927 294 ntBASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 AL078605.1-201ENST00000603529 500 ntBASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 MIR6862-1-201ENST00000613016 70 ntBASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 MIR6862-2-201ENST00000614755 70 ntBASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHGA11Q9Y5H2 AC008725.1-201ENST00000605123 2263 ntBASIC4.72□□□□□ -1.65
PCDHGA11Q9Y5H2 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHGA11Q9Y5H2 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGA11Q9Y5H2 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.72□□□□□ -1.65
PCDHGA11Q9Y5H2 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.72□□□□□ -1.65
PCDHGA11Q9Y5H2 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGA11Q9Y5H2 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.72□□□□□ -1.65
PCDHGA11Q9Y5H2 U8.4-201ENST00000363626 134 ntBASIC4.72□□□□□ -1.65
PCDHGA11Q9Y5H2 SNORA72.2-201ENST00000365028 127 ntBASIC4.72□□□□□ -1.65
PCDHGA11Q9Y5H2 RN7SKP51-201ENST00000410781 304 ntBASIC4.72□□□□□ -1.65
PCDHGA11Q9Y5H2 CKS1BP6-201ENST00000424932 240 ntBASIC4.72□□□□□ -1.65
PCDHGA11Q9Y5H2 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHGA11Q9Y5H2 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGA11Q9Y5H2 AC108751.2-201ENST00000469993 231 ntBASIC4.72□□□□□ -1.65
PCDHGA11Q9Y5H2 Vault.1-201ENST00000516474 102 ntBASIC4.72□□□□□ -1.65
PCDHGA11Q9Y5H2 RPL21P9-201ENST00000556149 474 ntBASIC4.72□□□□□ -1.65
PCDHGA11Q9Y5H2 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.72□□□□□ -1.65
PCDHGA11Q9Y5H2 MIR3144-201ENST00000579460 79 ntBASIC4.72□□□□□ -1.65
PCDHGA11Q9Y5H2 SNORA74C-1-201ENST00000580726 201 ntBASIC4.72□□□□□ -1.65
PCDHGA11Q9Y5H2 AC010999.1-201ENST00000611856 324 ntBASIC4.72□□□□□ -1.65
PCDHGA11Q9Y5H2 AL021997.2-201ENST00000615674 271 ntBASIC4.72□□□□□ -1.65
PCDHGA11Q9Y5H2 MIR6729-201ENST00000618194 65 ntBASIC4.72□□□□□ -1.65
PCDHGA11Q9Y5H2 MIR6886-201ENST00000619864 61 ntBASIC4.72□□□□□ -1.65
PCDHGA11Q9Y5H2 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.72□□□□□ -1.65
PCDHGA11Q9Y5H2 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.72□□□□□ -1.65
PCDHGA11Q9Y5H2 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGA11Q9Y5H2 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
PCDHGA11Q9Y5H2 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.72□□□□□ -1.65
PCDHGA11Q9Y5H2 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
PCDHGA11Q9Y5H2 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGA11Q9Y5H2 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGA11Q9Y5H2 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
PCDHGA11Q9Y5H2 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.71□□□□□ -1.65
PCDHGA11Q9Y5H2 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
PCDHGA11Q9Y5H2 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
PCDHGA11Q9Y5H2 MAPK10-320ENST00000641462 6696 ntBASIC4.71□□□□□ -1.66
PCDHGA11Q9Y5H2 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PCDHGA11Q9Y5H2 RNA5SP515-201ENST00000364570 118 ntBASIC4.71□□□□□ -1.66
PCDHGA11Q9Y5H2 RNU6-923P-201ENST00000364753 107 ntBASIC4.71□□□□□ -1.66
PCDHGA11Q9Y5H2 Y_RNA.435-201ENST00000384095 112 ntBASIC4.71□□□□□ -1.66
PCDHGA11Q9Y5H2 SNORA40.19-201ENST00000390846 128 ntBASIC4.71□□□□□ -1.66
PCDHGA11Q9Y5H2 U3.19-201ENST00000390893 196 ntBASIC4.71□□□□□ -1.66
PCDHGA11Q9Y5H2 FTH1P15-201ENST00000406984 280 ntBASIC4.71□□□□□ -1.66
PCDHGA11Q9Y5H2 VDAC1P3-201ENST00000434069 851 ntBASIC4.71□□□□□ -1.66
PCDHGA11Q9Y5H2 MRPS10P1-201ENST00000448483 130 ntBASIC4.71□□□□□ -1.66
PCDHGA11Q9Y5H2 AC005042.3-201ENST00000453230 174 ntBASIC4.71□□□□□ -1.66
PCDHGA11Q9Y5H2 SNORD2.1-201ENST00000458762 69 ntBASIC4.71□□□□□ -1.66
PCDHGA11Q9Y5H2 BX284632.1-201ENST00000478218 541 ntBASIC4.71□□□□□ -1.66
PCDHGA11Q9Y5H2 AC078817.1-201ENST00000492623 435 ntBASIC4.71□□□□□ -1.66
PCDHGA11Q9Y5H2 AC140172.1-201ENST00000502928 141 ntBASIC4.71□□□□□ -1.66
PCDHGA11Q9Y5H2 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.71□□□□□ -1.66
PCDHGA11Q9Y5H2 AC108043.1-201ENST00000512696 574 ntBASIC4.71□□□□□ -1.66
PCDHGA11Q9Y5H2 RN7SKP147-201ENST00000517154 244 ntBASIC4.71□□□□□ -1.66
PCDHGA11Q9Y5H2 RAB9BP1-201ENST00000519581 626 ntBASIC4.71□□□□□ -1.66
PCDHGA11Q9Y5H2 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.71□□□□□ -1.66
PCDHGA11Q9Y5H2 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.71□□□□□ -1.66
PCDHGA11Q9Y5H2 MIR3691-201ENST00000578066 90 ntBASIC4.71□□□□□ -1.66
PCDHGA11Q9Y5H2 AC068831.7-201ENST00000616954 363 ntBASIC4.71□□□□□ -1.66
PCDHGA11Q9Y5H2 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
PCDHGA11Q9Y5H2 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
PCDHGA11Q9Y5H2 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PCDHGA11Q9Y5H2 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHGA11Q9Y5H2 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
PCDHGA11Q9Y5H2 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHGA11Q9Y5H2 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHGA11Q9Y5H2 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PCDHGA11Q9Y5H2 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.7□□□□□ -1.66
PCDHGA11Q9Y5H2 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
PCDHGA11Q9Y5H2 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHGA11Q9Y5H2 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.7□□□□□ -1.66
PCDHGA11Q9Y5H2 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PCDHGA11Q9Y5H2 RNA5SP197-201ENST00000363357 119 ntBASIC4.7□□□□□ -1.66
PCDHGA11Q9Y5H2 Y_RNA.262-201ENST00000364641 102 ntBASIC4.7□□□□□ -1.66
PCDHGA11Q9Y5H2 RNU1-106P-201ENST00000384382 164 ntBASIC4.7□□□□□ -1.66
PCDHGA11Q9Y5H2 SNORA70-201ENST00000384436 135 ntBASIC4.7□□□□□ -1.66
PCDHGA11Q9Y5H2 MIR765-201ENST00000390226 114 ntBASIC4.7□□□□□ -1.66
PCDHGA11Q9Y5H2 AL592291.1-201ENST00000403830 352 ntBASIC4.7□□□□□ -1.66
PCDHGA11Q9Y5H2 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.7□□□□□ -1.66
PCDHGA11Q9Y5H2 RN7SKP229-201ENST00000410465 302 ntBASIC4.7□□□□□ -1.66
PCDHGA11Q9Y5H2 EIF4HP2-201ENST00000424380 563 ntBASIC4.7□□□□□ -1.66
PCDHGA11Q9Y5H2 AC073850.1-201ENST00000449243 255 ntBASIC4.7□□□□□ -1.66
PCDHGA11Q9Y5H2 RN7SL727P-201ENST00000482164 296 ntBASIC4.7□□□□□ -1.66
PCDHGA11Q9Y5H2 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.7□□□□□ -1.66
PCDHGA11Q9Y5H2 RNA5SP468-201ENST00000516782 93 ntBASIC4.7□□□□□ -1.66
PCDHGA11Q9Y5H2 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHGA11Q9Y5H2 AC025884.1-201ENST00000556034 378 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms