Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 U8.18-201ENST00000459285 133 ntBASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 RPL21P11-201ENST00000461458 483 ntBASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 RPL23AP45-201ENST00000476406 468 ntBASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 AC026726.1-201ENST00000512859 601 ntBASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 RNU6-377P-201ENST00000515965 102 ntBASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 Y_RNA.687-201ENST00000516558 91 ntBASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 MIR5690-201ENST00000583739 73 ntBASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 AL451007.1-201ENST00000595491 289 ntBASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 AC024153.1-201ENST00000603103 365 ntBASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 SRGNP1-201ENST00000603392 451 ntBASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 AC007179.3-201ENST00000604976 235 ntBASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 AC091167.4-201ENST00000605079 184 ntBASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 MIR486-1-201ENST00000612171 68 ntBASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 MIR8058-201ENST00000615737 89 ntBASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 AC090574.1-201ENST00000623186 233 ntBASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 ADAM3A-203ENST00000461344 2157 ntBASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 Z98749.2-208ENST00000381646 500 ntBASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 RNU6-95P-201ENST00000384697 107 ntBASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 MIR34B-201ENST00000385076 84 ntBASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 RPL7P37-201ENST00000425095 738 ntBASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 ATP5HP2-201ENST00000433885 485 ntBASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 AC114801.2-201ENST00000503825 781 ntBASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 AC116337.1-201ENST00000509680 687 ntBASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 RNU6-559P-201ENST00000516151 98 ntBASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 GLYCAM1-201ENST00000546596 285 ntBASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 AC021739.1-201ENST00000559631 174 ntBASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 AL161756.2-201ENST00000604597 246 ntBASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 ELOCP5-201ENST00000604924 333 ntBASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 MTND4LP5-201ENST00000605152 292 ntBASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 AC016727.1-205ENST00000605437 569 ntBASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 AL591516.1-201ENST00000611326 274 ntBASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 AC091152.2-201ENST00000591628 2569 ntBASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 CDC27P3-201ENST00000635418 1910 ntBASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHGA9Q9Y5G4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 UBE3AP2-201ENST00000429033 2259 ntBASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 Y_RNA.315-201ENST00000365117 102 ntBASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 RNU6-898P-201ENST00000365627 104 ntBASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 MIR518D-201ENST00000385014 87 ntBASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 MIR591-201ENST00000385290 95 ntBASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 AL139247.1-201ENST00000422768 325 ntBASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 AL591419.1-201ENST00000427423 339 ntBASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 AC093151.1-201ENST00000427711 313 ntBASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 ARF4P2-201ENST00000430209 526 ntBASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 CYCSP32-201ENST00000440548 321 ntBASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 RPS3AP12-201ENST00000443616 753 ntBASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 AL031274.1-201ENST00000450334 232 ntBASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 HMGN2P13-201ENST00000476476 274 ntBASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 SMURF2P1-201ENST00000514992 481 ntBASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 AL163153.1-201ENST00000554223 283 ntBASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 VN1R107P-201ENST00000601784 209 ntBASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 AL160281.1-201ENST00000605307 311 ntBASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 U7.8-201ENST00000619968 63 ntBASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 PLCE1P1-201ENST00000622094 305 ntBASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 AL773545.4-201ENST00000637262 310 ntBASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 U4.7-201ENST00000638126 106 ntBASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 AL513478.4-201ENST00000641636 310 ntBASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGA9Q9Y5G4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHGA9Q9Y5G4 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.62□□□□□ -1.83
PCDHGA9Q9Y5G4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.62□□□□□ -1.83
PCDHGA9Q9Y5G4 Y_RNA.67-201ENST00000362870 100 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms