Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.21□□□□□ -1.9
PKP3Q9Y446 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PKP3Q9Y446 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PKP3Q9Y446 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PKP3Q9Y446 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.2□□□□□ -1.9
PKP3Q9Y446 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.2□□□□□ -1.9
PKP3Q9Y446 MIR412-201ENST00000362142 91 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 SNORA63.1-201ENST00000362493 131 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 RNA5SP383-201ENST00000362934 120 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 SNORD113-7-201ENST00000363762 77 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 RNU6-1303P-201ENST00000364841 107 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 Y_RNA.414-201ENST00000384011 101 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 SNORA75B-201ENST00000384053 137 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 Y_RNA.480-201ENST00000384364 102 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 RNVU1-14-201ENST00000384770 164 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 EI24P2-201ENST00000397776 1076 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 AL357075.1-201ENST00000404107 726 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 RNU4-47P-201ENST00000410876 114 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 RNA5SP120-201ENST00000410900 112 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 RPL32P35-201ENST00000415214 394 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 AL353678.1-201ENST00000422735 741 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 AC005300.1-201ENST00000428401 373 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 MYL8P-204ENST00000431574 518 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 NDUFA5P4-201ENST00000436704 385 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 IFNA20P-201ENST00000436840 528 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 SNRPEP8-201ENST00000442866 260 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 AC109925.1-201ENST00000478069 331 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.2□□□□□ -1.9
PKP3Q9Y446 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.2□□□□□ -1.9
PKP3Q9Y446 RNA5SP217-201ENST00000515959 91 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 RNU4-49P-201ENST00000516080 140 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 SNORA14.1-201ENST00000516113 141 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 RNU6-928P-201ENST00000516876 104 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.2□□□□□ -1.9
PKP3Q9Y446 AC068657.1-201ENST00000520807 306 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 AC025755.1-201ENST00000521306 278 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.2□□□□□ -1.9
PKP3Q9Y446 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.2□□□□□ -1.9
PKP3Q9Y446 AC037471.2-201ENST00000564941 598 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 AMZ2P1-203ENST00000565833 850 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.2□□□□□ -1.9
PKP3Q9Y446 LRRC37A5P-203ENST00000580181 585 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 MIR2682-201ENST00000580305 110 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 MIR3609-201ENST00000582661 80 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.2□□□□□ -1.9
PKP3Q9Y446 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.2□□□□□ -1.9
PKP3Q9Y446 SRGNP1-201ENST00000603392 451 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PKP3Q9Y446 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.2□□□□□ -1.9
PKP3Q9Y446 MTND5P1-201ENST00000445440 1375 ntBASIC3.2□□□□□ -1.9
PKP3Q9Y446 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.2□□□□□ -1.9
PKP3Q9Y446 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
PKP3Q9Y446 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
PKP3Q9Y446 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PKP3Q9Y446 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PKP3Q9Y446 SNORD56.3-201ENST00000363507 71 ntBASIC3.19□□□□□ -1.9
PKP3Q9Y446 Y_RNA.166-201ENST00000363730 102 ntBASIC3.19□□□□□ -1.9
PKP3Q9Y446 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PKP3Q9Y446 RN7SKP32-201ENST00000410167 303 ntBASIC3.19□□□□□ -1.9
PKP3Q9Y446 MTND3P8-201ENST00000412909 339 ntBASIC3.19□□□□□ -1.9
PKP3Q9Y446 NDUFB4P5-201ENST00000415445 361 ntBASIC3.19□□□□□ -1.9
PKP3Q9Y446 AL353621.1-201ENST00000418219 243 ntBASIC3.19□□□□□ -1.9
PKP3Q9Y446 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.19□□□□□ -1.9
PKP3Q9Y446 HSPE1P1-201ENST00000421494 318 ntBASIC3.19□□□□□ -1.9
PKP3Q9Y446 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.19□□□□□ -1.9
PKP3Q9Y446 RNU7-66P-201ENST00000459469 62 ntBASIC3.19□□□□□ -1.9
PKP3Q9Y446 RN7SL807P-201ENST00000470923 297 ntBASIC3.19□□□□□ -1.9
PKP3Q9Y446 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.19□□□□□ -1.9
PKP3Q9Y446 SNORA31.19-201ENST00000517079 126 ntBASIC3.19□□□□□ -1.9
PKP3Q9Y446 AC090136.1-201ENST00000520009 240 ntBASIC3.19□□□□□ -1.9
PKP3Q9Y446 IGHV3-76-201ENST00000522465 295 ntBASIC3.19□□□□□ -1.9
PKP3Q9Y446 CYCSP27-201ENST00000527643 293 ntBASIC3.19□□□□□ -1.9
PKP3Q9Y446 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.19□□□□□ -1.9
PKP3Q9Y446 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PKP3Q9Y446 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.19□□□□□ -1.9
PKP3Q9Y446 TRAV37-201ENST00000553906 342 ntBASIC3.19□□□□□ -1.9
PKP3Q9Y446 MIR5680-201ENST00000577577 84 ntBASIC3.19□□□□□ -1.9
PKP3Q9Y446 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.19□□□□□ -1.9
PKP3Q9Y446 AC024220.1-201ENST00000603675 484 ntBASIC3.19□□□□□ -1.9
PKP3Q9Y446 AL355598.1-201ENST00000604169 202 ntBASIC3.19□□□□□ -1.9
PKP3Q9Y446 AC007938.3-201ENST00000604965 623 ntBASIC3.19□□□□□ -1.9
PKP3Q9Y446 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PKP3Q9Y446 AC068831.7-201ENST00000616954 363 ntBASIC3.19□□□□□ -1.9
PKP3Q9Y446 AL031601.2-202ENST00000622650 282 ntBASIC3.19□□□□□ -1.9
PKP3Q9Y446 AC073308.1-201ENST00000623696 305 ntBASIC3.19□□□□□ -1.9
PKP3Q9Y446 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.19□□□□□ -1.9
PKP3Q9Y446 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.19□□□□□ -1.9
PKP3Q9Y446 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.19□□□□□ -1.9
PKP3Q9Y446 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.19□□□□□ -1.9
PKP3Q9Y446 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.18□□□□□ -1.9
PKP3Q9Y446 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PKP3Q9Y446 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.18□□□□□ -1.9
PKP3Q9Y446 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PKP3Q9Y446 SNORD3E-201ENST00000362899 217 ntBASIC3.18□□□□□ -1.9
PKP3Q9Y446 RNU6-266P-201ENST00000364225 107 ntBASIC3.18□□□□□ -1.9
PKP3Q9Y446 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.18□□□□□ -1.9
PKP3Q9Y446 RNU6-831P-201ENST00000384548 107 ntBASIC3.18□□□□□ -1.9
PKP3Q9Y446 RNU6-607P-201ENST00000411283 108 ntBASIC3.18□□□□□ -1.9
PKP3Q9Y446 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.18□□□□□ -1.9
PKP3Q9Y446 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms