Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 RNA5SP399-201ENST00000364003 117 ntBASIC4.49□□□□□ -1.69
DDX41Q9UJV9 RNU5E-7P-201ENST00000365290 117 ntBASIC4.49□□□□□ -1.69
DDX41Q9UJV9 AC117470.1-201ENST00000381974 330 ntBASIC4.49□□□□□ -1.69
DDX41Q9UJV9 RNU6-639P-201ENST00000384074 107 ntBASIC4.49□□□□□ -1.69
DDX41Q9UJV9 MIR30B-201ENST00000384850 88 ntBASIC4.49□□□□□ -1.69
DDX41Q9UJV9 AL591034.1-201ENST00000407447 340 ntBASIC4.49□□□□□ -1.69
DDX41Q9UJV9 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.49□□□□□ -1.69
DDX41Q9UJV9 RNU6-325P-201ENST00000411132 105 ntBASIC4.49□□□□□ -1.69
DDX41Q9UJV9 RPL26P27-201ENST00000414397 437 ntBASIC4.49□□□□□ -1.69
DDX41Q9UJV9 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.49□□□□□ -1.69
DDX41Q9UJV9 MTND2P23-201ENST00000422990 651 ntBASIC4.49□□□□□ -1.69
DDX41Q9UJV9 RNA5SP310-201ENST00000459084 116 ntBASIC4.49□□□□□ -1.69
DDX41Q9UJV9 AC113155.1-201ENST00000511141 769 ntBASIC4.49□□□□□ -1.69
DDX41Q9UJV9 RNU1-103P-201ENST00000516502 125 ntBASIC4.49□□□□□ -1.69
DDX41Q9UJV9 RNU6-703P-201ENST00000516946 107 ntBASIC4.49□□□□□ -1.69
DDX41Q9UJV9 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.49□□□□□ -1.69
DDX41Q9UJV9 TRAV32-201ENST00000553993 340 ntBASIC4.49□□□□□ -1.69
DDX41Q9UJV9 HMGB1P14-201ENST00000557424 591 ntBASIC4.49□□□□□ -1.69
DDX41Q9UJV9 LINC00933-203ENST00000559812 219 ntBASIC4.49□□□□□ -1.69
DDX41Q9UJV9 AC109446.1-201ENST00000566172 220 ntBASIC4.49□□□□□ -1.69
DDX41Q9UJV9 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.49□□□□□ -1.69
DDX41Q9UJV9 AL355802.3-201ENST00000607571 545 ntBASIC4.49□□□□□ -1.69
DDX41Q9UJV9 AL121772.2-201ENST00000614331 297 ntBASIC4.49□□□□□ -1.69
DDX41Q9UJV9 AL161629.2-201ENST00000615347 275 ntBASIC4.49□□□□□ -1.69
DDX41Q9UJV9 SCARNA4-202ENST00000625402 129 ntBASIC4.49□□□□□ -1.69
DDX41Q9UJV9 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.49□□□□□ -1.69
DDX41Q9UJV9 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
DDX41Q9UJV9 AL133383.2-201ENST00000622958 2336 ntBASIC4.49□□□□□ -1.69
DDX41Q9UJV9 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
DDX41Q9UJV9 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.48□□□□□ -1.69
DDX41Q9UJV9 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.48□□□□□ -1.69
DDX41Q9UJV9 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
DDX41Q9UJV9 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
DDX41Q9UJV9 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
DDX41Q9UJV9 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
DDX41Q9UJV9 RNU6-827P-201ENST00000365553 106 ntBASIC4.48□□□□□ -1.69
DDX41Q9UJV9 RNU6-658P-201ENST00000384606 106 ntBASIC4.48□□□□□ -1.69
DDX41Q9UJV9 SNORA1.3-201ENST00000384676 136 ntBASIC4.48□□□□□ -1.69
DDX41Q9UJV9 MIR888-201ENST00000401186 77 ntBASIC4.48□□□□□ -1.69
DDX41Q9UJV9 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
DDX41Q9UJV9 AL133396.1-201ENST00000432048 687 ntBASIC4.48□□□□□ -1.69
DDX41Q9UJV9 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
DDX41Q9UJV9 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.48□□□□□ -1.69
DDX41Q9UJV9 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.48□□□□□ -1.69
DDX41Q9UJV9 AC128713.1-201ENST00000471495 306 ntBASIC4.48□□□□□ -1.69
DDX41Q9UJV9 RN7SL323P-201ENST00000494712 295 ntBASIC4.48□□□□□ -1.69
DDX41Q9UJV9 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.48□□□□□ -1.69
DDX41Q9UJV9 AC114801.2-201ENST00000503825 781 ntBASIC4.48□□□□□ -1.69
DDX41Q9UJV9 RNU6-470P-201ENST00000515954 104 ntBASIC4.48□□□□□ -1.69
DDX41Q9UJV9 RNU6-377P-201ENST00000515965 102 ntBASIC4.48□□□□□ -1.69
DDX41Q9UJV9 CYCSP30-201ENST00000546447 172 ntBASIC4.48□□□□□ -1.69
DDX41Q9UJV9 AC011602.1-201ENST00000546484 331 ntBASIC4.48□□□□□ -1.69
DDX41Q9UJV9 MIR4273-201ENST00000582824 84 ntBASIC4.48□□□□□ -1.69
DDX41Q9UJV9 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.48□□□□□ -1.69
DDX41Q9UJV9 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.48□□□□□ -1.69
DDX41Q9UJV9 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.48□□□□□ -1.69
DDX41Q9UJV9 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
DDX41Q9UJV9 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
DDX41Q9UJV9 Z82217.1-201ENST00000625157 8149 ntBASIC4.47□□□□□ -1.69
DDX41Q9UJV9 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
DDX41Q9UJV9 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
DDX41Q9UJV9 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
DDX41Q9UJV9 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
DDX41Q9UJV9 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.47□□□□□ -1.69
DDX41Q9UJV9 RPL9P7-201ENST00000330965 580 ntBASIC4.47□□□□□ -1.69
DDX41Q9UJV9 RNA5SP124-201ENST00000362739 110 ntBASIC4.47□□□□□ -1.69
DDX41Q9UJV9 RNU6-490P-201ENST00000362985 107 ntBASIC4.47□□□□□ -1.69
DDX41Q9UJV9 Y_RNA.216-201ENST00000364205 93 ntBASIC4.47□□□□□ -1.69
DDX41Q9UJV9 RNU6-596P-201ENST00000365395 98 ntBASIC4.47□□□□□ -1.69
DDX41Q9UJV9 RNU6-1035P-201ENST00000384477 107 ntBASIC4.47□□□□□ -1.69
DDX41Q9UJV9 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
DDX41Q9UJV9 AL513475.1-201ENST00000406602 315 ntBASIC4.47□□□□□ -1.69
DDX41Q9UJV9 RAB9AP3-201ENST00000412737 573 ntBASIC4.47□□□□□ -1.69
DDX41Q9UJV9 GOT2P5-201ENST00000433995 546 ntBASIC4.47□□□□□ -1.69
DDX41Q9UJV9 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.47□□□□□ -1.69
DDX41Q9UJV9 AL513043.1-201ENST00000439124 535 ntBASIC4.47□□□□□ -1.69
DDX41Q9UJV9 AL035666.1-201ENST00000446195 348 ntBASIC4.47□□□□□ -1.69
DDX41Q9UJV9 FTH1P25-201ENST00000447665 469 ntBASIC4.47□□□□□ -1.69
DDX41Q9UJV9 AL358232.1-201ENST00000448030 501 ntBASIC4.47□□□□□ -1.69
DDX41Q9UJV9 AL133547.1-201ENST00000448546 220 ntBASIC4.47□□□□□ -1.69
DDX41Q9UJV9 RAB9AP1-201ENST00000449393 573 ntBASIC4.47□□□□□ -1.69
DDX41Q9UJV9 RPL9P9-202ENST00000466501 579 ntBASIC4.47□□□□□ -1.69
DDX41Q9UJV9 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.47□□□□□ -1.69
DDX41Q9UJV9 RNU6-1183P-201ENST00000517054 60 ntBASIC4.47□□□□□ -1.69
DDX41Q9UJV9 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.47□□□□□ -1.69
DDX41Q9UJV9 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
DDX41Q9UJV9 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.47□□□□□ -1.69
DDX41Q9UJV9 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
DDX41Q9UJV9 SRP72P2-201ENST00000344851 1979 ntBASIC4.47□□□□□ -1.69
DDX41Q9UJV9 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.47□□□□□ -1.69
DDX41Q9UJV9 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
DDX41Q9UJV9 ZNF807-201ENST00000328088 1707 ntBASIC4.46□□□□□ -1.69
DDX41Q9UJV9 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.46□□□□□ -1.69
DDX41Q9UJV9 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
DDX41Q9UJV9 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
DDX41Q9UJV9 AP001486.2-201ENST00000561652 5113 ntBASIC4.46□□□□□ -1.7
DDX41Q9UJV9 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
DDX41Q9UJV9 SNORA22B-201ENST00000383876 138 ntBASIC4.46□□□□□ -1.7
DDX41Q9UJV9 RNU1-73P-201ENST00000383971 164 ntBASIC4.46□□□□□ -1.7
DDX41Q9UJV9 RNU6-1160P-201ENST00000384546 104 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 165.2 ms