Protein–RNA interactions for Protein: Q9P1Z9

CCDC180, Coiled-coil domain-containing protein 180, humanhuman

Predictions only

Length 1,646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180Q9P1Z9 RNA5SP56-201ENST00000410277 118 ntBASIC0.44□□□□□ -2.34
CCDC180Q9P1Z9 RPS3AP37-201ENST00000419176 745 ntBASIC0.44□□□□□ -2.34
CCDC180Q9P1Z9 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC0.44□□□□□ -2.34
CCDC180Q9P1Z9 EIF4EP2-201ENST00000422816 654 ntBASIC0.44□□□□□ -2.34
CCDC180Q9P1Z9 GTF2IP20-201ENST00000431663 360 ntBASIC0.44□□□□□ -2.34
CCDC180Q9P1Z9 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.44□□□□□ -2.34
CCDC180Q9P1Z9 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.44□□□□□ -2.34
CCDC180Q9P1Z9 AC087477.1-201ENST00000465747 340 ntBASIC0.44□□□□□ -2.34
CCDC180Q9P1Z9 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.44□□□□□ -2.34
CCDC180Q9P1Z9 SNORD116-28-201ENST00000516123 91 ntBASIC0.44□□□□□ -2.34
CCDC180Q9P1Z9 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.44□□□□□ -2.34
CCDC180Q9P1Z9 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.44□□□□□ -2.34
CCDC180Q9P1Z9 AL359212.1-201ENST00000556608 614 ntBASIC0.44□□□□□ -2.34
CCDC180Q9P1Z9 MIR4636-201ENST00000582271 80 ntBASIC0.44□□□□□ -2.34
CCDC180Q9P1Z9 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
CCDC180Q9P1Z9 RNU6-1293P-201ENST00000384077 107 ntBASIC0.43□□□□□ -2.34
CCDC180Q9P1Z9 SNORA29-201ENST00000384183 140 ntBASIC0.43□□□□□ -2.34
CCDC180Q9P1Z9 MIR518A2-201ENST00000384966 87 ntBASIC0.43□□□□□ -2.34
CCDC180Q9P1Z9 AC009310.1-201ENST00000414414 451 ntBASIC0.43□□□□□ -2.34
CCDC180Q9P1Z9 AC112492.4-201ENST00000456549 352 ntBASIC0.43□□□□□ -2.34
CCDC180Q9P1Z9 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.43□□□□□ -2.34
CCDC180Q9P1Z9 AC069294.1-201ENST00000608397 350 ntBASIC0.43□□□□□ -2.34
CCDC180Q9P1Z9 AP002826.1-201ENST00000608835 315 ntBASIC0.43□□□□□ -2.34
CCDC180Q9P1Z9 RNU6-156P-201ENST00000621869 107 ntBASIC0.43□□□□□ -2.34
CCDC180Q9P1Z9 RNU6-173P-201ENST00000364215 104 ntBASIC0.42□□□□□ -2.34
CCDC180Q9P1Z9 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.42□□□□□ -2.34
CCDC180Q9P1Z9 RNU6-1074P-201ENST00000383995 104 ntBASIC0.42□□□□□ -2.34
CCDC180Q9P1Z9 RPS24P7-201ENST00000416921 246 ntBASIC0.42□□□□□ -2.34
CCDC180Q9P1Z9 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.42□□□□□ -2.34
CCDC180Q9P1Z9 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.42□□□□□ -2.34
CCDC180Q9P1Z9 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.42□□□□□ -2.34
CCDC180Q9P1Z9 AC145146.1-201ENST00000496370 254 ntBASIC0.42□□□□□ -2.34
CCDC180Q9P1Z9 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.42□□□□□ -2.34
CCDC180Q9P1Z9 AC005741.1-201ENST00000511094 432 ntBASIC0.42□□□□□ -2.34
CCDC180Q9P1Z9 AC016065.2-201ENST00000514530 444 ntBASIC0.42□□□□□ -2.34
CCDC180Q9P1Z9 AC010900.2-201ENST00000604508 210 ntBASIC0.42□□□□□ -2.34
CCDC180Q9P1Z9 AC005832.2-201ENST00000538921 1430 ntBASIC0.42□□□□□ -2.34
CCDC180Q9P1Z9 OR5T3-201ENST00000303059 1023 ntBASIC0.42□□□□□ -2.34
CCDC180Q9P1Z9 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
CCDC180Q9P1Z9 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.42□□□□□ -2.34
CCDC180Q9P1Z9 MTCYBP29-201ENST00000436327 1006 ntBASIC0.42□□□□□ -2.34
CCDC180Q9P1Z9 RSU1P2-202ENST00000437884 485 ntBASIC0.42□□□□□ -2.34
CCDC180Q9P1Z9 MTND4P6-201ENST00000438297 472 ntBASIC0.42□□□□□ -2.34
CCDC180Q9P1Z9 AL133373.1-201ENST00000497098 94 ntBASIC0.42□□□□□ -2.34
CCDC180Q9P1Z9 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.42□□□□□ -2.34
CCDC180Q9P1Z9 AC025423.2-201ENST00000537570 439 ntBASIC0.42□□□□□ -2.34
CCDC180Q9P1Z9 AL391597.1-201ENST00000618707 694 ntBASIC0.42□□□□□ -2.34
CCDC180Q9P1Z9 Z99571.1-201ENST00000636677 394 ntBASIC0.42□□□□□ -2.34
CCDC180Q9P1Z9 RNU6-270P-201ENST00000364131 105 ntBASIC0.41□□□□□ -2.34
CCDC180Q9P1Z9 AC069282.1-201ENST00000411911 526 ntBASIC0.41□□□□□ -2.34
CCDC180Q9P1Z9 AC099677.1-201ENST00000420575 175 ntBASIC0.41□□□□□ -2.34
CCDC180Q9P1Z9 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC0.41□□□□□ -2.34
CCDC180Q9P1Z9 SNORA31.22-201ENST00000517204 135 ntBASIC0.41□□□□□ -2.34
CCDC180Q9P1Z9 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.41□□□□□ -2.34
CCDC180Q9P1Z9 AC097372.4-201ENST00000625025 466 ntBASIC0.41□□□□□ -2.34
CCDC180Q9P1Z9 RNU6-271P-201ENST00000363858 105 ntBASIC0.4□□□□□ -2.35
CCDC180Q9P1Z9 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.4□□□□□ -2.35
CCDC180Q9P1Z9 MIR608-201ENST00000384820 100 ntBASIC0.4□□□□□ -2.35
CCDC180Q9P1Z9 MIR218-1-201ENST00000384999 110 ntBASIC0.4□□□□□ -2.35
CCDC180Q9P1Z9 MIR518D-201ENST00000385014 87 ntBASIC0.4□□□□□ -2.35
CCDC180Q9P1Z9 RNU2-64P-201ENST00000411315 191 ntBASIC0.4□□□□□ -2.35
CCDC180Q9P1Z9 AC010099.3-201ENST00000423896 409 ntBASIC0.4□□□□□ -2.35
CCDC180Q9P1Z9 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC0.4□□□□□ -2.35
CCDC180Q9P1Z9 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC0.4□□□□□ -2.35
CCDC180Q9P1Z9 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.4□□□□□ -2.35
CCDC180Q9P1Z9 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.4□□□□□ -2.35
CCDC180Q9P1Z9 ANKRD36BP2-206ENST00000575193 1245 ntBASIC0.4□□□□□ -2.35
CCDC180Q9P1Z9 BX322635.1-201ENST00000605804 496 ntBASIC0.4□□□□□ -2.35
CCDC180Q9P1Z9 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.39□□□□□ -2.35
CCDC180Q9P1Z9 Y_RNA.390-201ENST00000383932 102 ntBASIC0.39□□□□□ -2.35
CCDC180Q9P1Z9 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.39□□□□□ -2.35
CCDC180Q9P1Z9 AC079140.2-201ENST00000506193 142 ntBASIC0.39□□□□□ -2.35
CCDC180Q9P1Z9 AL713998.2-201ENST00000604538 1198 ntBASIC0.39□□□□□ -2.35
CCDC180Q9P1Z9 AC022202.1-201ENST00000613515 211 ntBASIC0.39□□□□□ -2.35
CCDC180Q9P1Z9 AL138726.1-201ENST00000614873 333 ntBASIC0.39□□□□□ -2.35
CCDC180Q9P1Z9 RNU1-23P-201ENST00000363361 144 ntBASIC0.38□□□□□ -2.35
CCDC180Q9P1Z9 U6atac.2-201ENST00000408644 118 ntBASIC0.38□□□□□ -2.35
CCDC180Q9P1Z9 snoU13.9-201ENST00000458927 103 ntBASIC0.38□□□□□ -2.35
CCDC180Q9P1Z9 TRBVB-201ENST00000477100 408 ntBASIC0.38□□□□□ -2.35
CCDC180Q9P1Z9 MIR5589-201ENST00000579442 60 ntBASIC0.38□□□□□ -2.35
CCDC180Q9P1Z9 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.38□□□□□ -2.35
CCDC180Q9P1Z9 BNIP3P16-201ENST00000589779 534 ntBASIC0.38□□□□□ -2.35
CCDC180Q9P1Z9 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.38□□□□□ -2.35
CCDC180Q9P1Z9 SNORD1A-201ENST00000364968 72 ntBASIC0.38□□□□□ -2.35
CCDC180Q9P1Z9 Y_RNA.518-201ENST00000384552 113 ntBASIC0.38□□□□□ -2.35
CCDC180Q9P1Z9 AL449283.1-202ENST00000418249 604 ntBASIC0.38□□□□□ -2.35
CCDC180Q9P1Z9 AC004854.1-201ENST00000440356 349 ntBASIC0.38□□□□□ -2.35
CCDC180Q9P1Z9 RNU6-1282P-201ENST00000516735 96 ntBASIC0.38□□□□□ -2.35
CCDC180Q9P1Z9 CENPUP1-201ENST00000526649 1202 ntBASIC0.38□□□□□ -2.35
CCDC180Q9P1Z9 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.38□□□□□ -2.35
CCDC180Q9P1Z9 AC104763.3-201ENST00000613765 618 ntBASIC0.38□□□□□ -2.35
CCDC180Q9P1Z9 U1.36-201ENST00000620684 176 ntBASIC0.38□□□□□ -2.35
CCDC180Q9P1Z9 RNU6-105P-201ENST00000363909 104 ntBASIC0.37□□□□□ -2.35
CCDC180Q9P1Z9 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
CCDC180Q9P1Z9 RPS25P9-201ENST00000435591 252 ntBASIC0.37□□□□□ -2.35
CCDC180Q9P1Z9 AP000254.1-201ENST00000609934 520 ntBASIC0.37□□□□□ -2.35
CCDC180Q9P1Z9 AC126177.8-201ENST00000618339 1015 ntBASIC0.37□□□□□ -2.35
CCDC180Q9P1Z9 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
CCDC180Q9P1Z9 RNU6-1243P-201ENST00000364028 107 ntBASIC0.36□□□□□ -2.35
CCDC180Q9P1Z9 RNA5SP240-201ENST00000365355 128 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms