Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 LARP1BP2-201ENST00000486594 519 ntBASIC1.07□□□□□ -2.24
PHRF1Q9P1Y6 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.07□□□□□ -2.24
PHRF1Q9P1Y6 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.07□□□□□ -2.24
PHRF1Q9P1Y6 AC113420.1-201ENST00000507903 571 ntBASIC1.07□□□□□ -2.24
PHRF1Q9P1Y6 AC023141.11-201ENST00000508864 202 ntBASIC1.07□□□□□ -2.24
PHRF1Q9P1Y6 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.07□□□□□ -2.24
PHRF1Q9P1Y6 AC093752.1-206ENST00000511823 336 ntBASIC1.07□□□□□ -2.24
PHRF1Q9P1Y6 CYCSP2-201ENST00000558168 301 ntBASIC1.07□□□□□ -2.24
PHRF1Q9P1Y6 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.07□□□□□ -2.24
PHRF1Q9P1Y6 AC068276.1-201ENST00000605793 379 ntBASIC1.07□□□□□ -2.24
PHRF1Q9P1Y6 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.07□□□□□ -2.24
PHRF1Q9P1Y6 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.07□□□□□ -2.24
PHRF1Q9P1Y6 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.07□□□□□ -2.24
PHRF1Q9P1Y6 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
PHRF1Q9P1Y6 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
PHRF1Q9P1Y6 MTND5P30-201ENST00000452896 1731 ntBASIC1.06□□□□□ -2.24
PHRF1Q9P1Y6 RNU6-650P-201ENST00000365658 111 ntBASIC1.06□□□□□ -2.24
PHRF1Q9P1Y6 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.06□□□□□ -2.24
PHRF1Q9P1Y6 SNORA40.19-201ENST00000390846 128 ntBASIC1.06□□□□□ -2.24
PHRF1Q9P1Y6 RNA5SP212-201ENST00000391223 107 ntBASIC1.06□□□□□ -2.24
PHRF1Q9P1Y6 CCNG1P1-201ENST00000406783 885 ntBASIC1.06□□□□□ -2.24
PHRF1Q9P1Y6 AL133264.1-201ENST00000407157 562 ntBASIC1.06□□□□□ -2.24
PHRF1Q9P1Y6 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.06□□□□□ -2.24
PHRF1Q9P1Y6 AL591704.1-201ENST00000432574 275 ntBASIC1.06□□□□□ -2.24
PHRF1Q9P1Y6 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.06□□□□□ -2.24
PHRF1Q9P1Y6 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.06□□□□□ -2.24
PHRF1Q9P1Y6 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.06□□□□□ -2.24
PHRF1Q9P1Y6 RNA5SP291-201ENST00000517222 105 ntBASIC1.06□□□□□ -2.24
PHRF1Q9P1Y6 AP002906.1-201ENST00000603405 233 ntBASIC1.06□□□□□ -2.24
PHRF1Q9P1Y6 AC005034.5-201ENST00000604219 466 ntBASIC1.06□□□□□ -2.24
PHRF1Q9P1Y6 AP003400.5-201ENST00000624827 617 ntBASIC1.06□□□□□ -2.24
PHRF1Q9P1Y6 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.06□□□□□ -2.24
PHRF1Q9P1Y6 AC008555.8-201ENST00000623602 2168 ntBASIC1.06□□□□□ -2.24
PHRF1Q9P1Y6 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
PHRF1Q9P1Y6 RNU6-932P-201ENST00000391108 106 ntBASIC1.05□□□□□ -2.24
PHRF1Q9P1Y6 AL139397.2-201ENST00000404529 772 ntBASIC1.05□□□□□ -2.24
PHRF1Q9P1Y6 AL512844.2-201ENST00000433990 593 ntBASIC1.05□□□□□ -2.24
PHRF1Q9P1Y6 DDX3P2-201ENST00000446138 111 ntBASIC1.05□□□□□ -2.24
PHRF1Q9P1Y6 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.05□□□□□ -2.24
PHRF1Q9P1Y6 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.05□□□□□ -2.24
PHRF1Q9P1Y6 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
PHRF1Q9P1Y6 AC010460.2-201ENST00000509054 677 ntBASIC1.05□□□□□ -2.24
PHRF1Q9P1Y6 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.05□□□□□ -2.24
PHRF1Q9P1Y6 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.05□□□□□ -2.24
PHRF1Q9P1Y6 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.05□□□□□ -2.24
PHRF1Q9P1Y6 AL133241.1-201ENST00000556832 487 ntBASIC1.05□□□□□ -2.24
PHRF1Q9P1Y6 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.05□□□□□ -2.24
PHRF1Q9P1Y6 AC023824.3-201ENST00000569003 562 ntBASIC1.05□□□□□ -2.24
PHRF1Q9P1Y6 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.05□□□□□ -2.24
PHRF1Q9P1Y6 AC069294.1-201ENST00000608397 350 ntBASIC1.05□□□□□ -2.24
PHRF1Q9P1Y6 AC013476.2-201ENST00000614456 459 ntBASIC1.05□□□□□ -2.24
PHRF1Q9P1Y6 AL590396.4-201ENST00000636779 956 ntBASIC1.05□□□□□ -2.24
PHRF1Q9P1Y6 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 Y_RNA.85-201ENST00000363014 111 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 RNU6-741P-201ENST00000383889 107 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 RNU6-754P-201ENST00000391166 107 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 RNU2-28P-201ENST00000410457 189 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 UBE2FP1-201ENST00000416536 447 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 AC007435.1-201ENST00000421086 415 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 MRPL35P3-201ENST00000421557 364 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 AC104806.1-201ENST00000508720 308 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 AL132857.1-201ENST00000555180 708 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 AC011451.2-201ENST00000604303 598 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 AL450270.1-201ENST00000606160 391 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 AL158211.4-201ENST00000606988 584 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 AC006213.5-201ENST00000619673 288 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 MIR5739-201ENST00000619803 80 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 AL118508.4-201ENST00000624142 1176 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 AC090517.3-201ENST00000625170 141 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 ZNF702P-202ENST00000434269 1966 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 RNU6-1083P-201ENST00000384022 107 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 MIR561-201ENST00000385216 97 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 NDUFS5P1-201ENST00000405668 289 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 MTND1P21-201ENST00000412991 285 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 MTCO3P1-205ENST00000422088 832 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 PPP1R11P2-201ENST00000423543 382 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 VN1R42P-201ENST00000424651 344 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 ZNF863P-201ENST00000426746 417 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 ZFAND6P1-201ENST00000434138 605 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 NANOGP2-201ENST00000435391 727 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 AC092393.1-201ENST00000439625 742 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 TPT1P8-201ENST00000510120 555 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 RNU6-528P-201ENST00000516926 100 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 KATNBL1P5-201ENST00000605015 517 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 PRR13P7-201ENST00000605538 430 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 AL021997.1-201ENST00000605757 193 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms