| TMEM9 | Q9P0T7 | ELF1-201 | ENST00000239882 | 3566 nt | APPRIS P1 TSL 1 (best) BASIC | 2.33 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | FAR1-204 | ENST00000532502 | 5820 nt | TSL 2 BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | LIFR-201 | ENST00000263409 | 10089 nt | APPRIS P1 TSL 1 (best) BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | QSER1-204 | ENST00000527788 | 5052 nt | TSL 2 BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | Y_RNA.296-201 | ENST00000364930 | 108 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | RNU6-282P-201 | ENST00000365357 | 103 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | SET-203 | ENST00000372688 | 801 nt | TSL 2 BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | RNU6-741P-201 | ENST00000383889 | 107 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | RNU6-641P-201 | ENST00000384006 | 107 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | Y_RNA.517-201 | ENST00000384551 | 106 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | Y_RNA.582-201 | ENST00000391023 | 95 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | CTNNA2-204 | ENST00000409266 | 432 nt | TSL 3 BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AC004870.3-202 | ENST00000412996 | 432 nt | TSL 3 BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AC009158.1-206 | ENST00000417476 | 454 nt | TSL 3 BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AC083900.1-201 | ENST00000421964 | 469 nt | TSL 2 BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AC005062.1-206 | ENST00000424516 | 710 nt | TSL 3 BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AC010975.2-201 | ENST00000427781 | 588 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AC244035.3-201 | ENST00000428399 | 271 nt | TSL 2 BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | PCDH9-AS1-201 | ENST00000430861 | 532 nt | TSL 2 BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AL359853.2-201 | ENST00000442108 | 353 nt | TSL 2 BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | NEFMP1-201 | ENST00000443423 | 1006 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AC010095.1-201 | ENST00000443543 | 144 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AC018643.1-201 | ENST00000445459 | 414 nt | TSL 5 BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AL031659.1-201 | ENST00000447075 | 539 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | OFD1P4Y-201 | ENST00000455273 | 1179 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | C1DP4-201 | ENST00000455429 | 424 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AL445465.2-201 | ENST00000455530 | 461 nt | TSL 2 BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | RPS3AP17-201 | ENST00000472594 | 777 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | RPL30P5-201 | ENST00000494923 | 336 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AC105252.1-201 | ENST00000503089 | 286 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AC027343.1-201 | ENST00000504765 | 407 nt | TSL 4 BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AC026436.1-201 | ENST00000510537 | 270 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AC097460.1-201 | ENST00000514624 | 590 nt | TSL 3 BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | SCARNA24.1-201 | ENST00000516465 | 137 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | RNA5SP281-201 | ENST00000516504 | 135 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | RN7SKP258-201 | ENST00000517151 | 304 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | RNU1-104P-201 | ENST00000517280 | 175 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | ZNF706-202 | ENST00000517844 | 604 nt | APPRIS P1 TSL 3 BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | IGLV3-17-201 | ENST00000519099 | 244 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | OR4R1P-201 | ENST00000529879 | 463 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AC091047.1-201 | ENST00000533344 | 552 nt | TSL 4 BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AC009135.1-201 | ENST00000549303 | 776 nt | TSL 2 BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | G2E3-AS1-202 | ENST00000550118 | 609 nt | TSL 5 BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | NTS-203 | ENST00000551529 | 801 nt | TSL 3 BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AC009558.1-201 | ENST00000561174 | 581 nt | TSL 4 BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AC138625.1-201 | ENST00000567556 | 483 nt | TSL 3 BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AC010547.2-201 | ENST00000568523 | 409 nt | TSL 5 BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AC005304.3-201 | ENST00000581533 | 511 nt | TSL 3 BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AC104984.5-201 | ENST00000586878 | 94 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AC078795.2-201 | ENST00000602835 | 1252 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AC103810.6-201 | ENST00000606708 | 136 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AP002360.4-201 | ENST00000606980 | 481 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AL445584.2-201 | ENST00000614030 | 616 nt | TSL 5 BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AC034102.8-201 | ENST00000615146 | 484 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | OR5H6-203 | ENST00000642105 | 978 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | USP53-202 | ENST00000450251 | 6072 nt | APPRIS P1 TSL 5 BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | SAMD9L-201 | ENST00000318238 | 7134 nt | APPRIS P1 TSL 1 (best) BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AC007785.2-201 | ENST00000598627 | 1916 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | DENND4A-202 | ENST00000443035 | 8665 nt | TSL 1 (best) BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | MT-CYB-201 | ENST00000361789 | 1141 nt | APPRIS P1 BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | RNU6-181P-201 | ENST00000363225 | 107 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | RNU6-169P-201 | ENST00000365336 | 107 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | SMIM11P1-201 | ENST00000369586 | 178 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | MIR558-201 | ENST00000384920 | 94 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | Z85995.1-201 | ENST00000415547 | 335 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | MTND1P23-201 | ENST00000416931 | 372 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | ABCC5-AS1-201 | ENST00000422946 | 469 nt | TSL 2 BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AC104651.1-201 | ENST00000427559 | 735 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | HMGB1P27-201 | ENST00000431429 | 603 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | RPL23AP30-201 | ENST00000432419 | 501 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AC025038.1-201 | ENST00000433249 | 336 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AC005019.2-201 | ENST00000434321 | 359 nt | TSL 5 BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AL365258.1-201 | ENST00000440885 | 247 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | PIGFP3-201 | ENST00000441918 | 722 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AL138830.2-202 | ENST00000446358 | 786 nt | TSL 2 BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AP000477.2-201 | ENST00000447405 | 778 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AC010099.1-201 | ENST00000455434 | 375 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AC013267.1-201 | ENST00000458227 | 267 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | RPS20P22-201 | ENST00000473700 | 357 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | RPS29P21-201 | ENST00000496272 | 170 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AC124854.1-202 | ENST00000513779 | 339 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | RNU6-445P-201 | ENST00000516949 | 107 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | RNA5SP291-201 | ENST00000517222 | 105 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AP006587.4-201 | ENST00000526053 | 529 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AC008115.2-201 | ENST00000539988 | 241 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | MIR6895-201 | ENST00000613497 | 78 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | LINC02033-202 | ENST00000623312 | 492 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | SLC39A10-201 | ENST00000359634 | 5322 nt | APPRIS P1 TSL 1 (best) BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | EVI2A-201 | ENST00000247270 | 1860 nt | APPRIS P3 TSL 2 BASIC | 2.31 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AC073343.1-201 | ENST00000328239 | 651 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | SNORA67.1-201 | ENST00000364749 | 141 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | TSHB-202 | ENST00000369517 | 474 nt | APPRIS P1 TSL 1 (best) BASIC | 2.3 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | MAPK8-202 | ENST00000374174 | 739 nt | TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | RNU6-456P-201 | ENST00000384493 | 107 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | RNU6ATAC37P-201 | ENST00000408328 | 131 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | RN7SKP223-201 | ENST00000410582 | 62 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AL445123.1-201 | ENST00000422023 | 446 nt | TSL 2 BASIC | 2.3 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | MED13P1-201 | ENST00000428342 | 171 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | AL512844.2-201 | ENST00000433990 | 593 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| TMEM9 | Q9P0T7 | GPR143P-201 | ENST00000434155 | 205 nt | BASIC | 2.3 | □□□□□ -2.04 | | |