Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.78□□□□□ -2.12
CLN6Q9NWW5 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.78□□□□□ -2.12
CLN6Q9NWW5 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.78□□□□□ -2.12
CLN6Q9NWW5 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.78□□□□□ -2.12
CLN6Q9NWW5 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CLN6Q9NWW5 AP001004.1-201ENST00000582468 324 ntBASIC1.78□□□□□ -2.12
CLN6Q9NWW5 AC121334.2-201ENST00000605387 271 ntBASIC1.78□□□□□ -2.12
CLN6Q9NWW5 AC107952.2-201ENST00000606048 486 ntBASIC1.78□□□□□ -2.12
CLN6Q9NWW5 CENPCP1-201ENST00000533085 2578 ntBASIC1.78□□□□□ -2.12
CLN6Q9NWW5 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.78□□□□□ -2.13
CLN6Q9NWW5 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
CLN6Q9NWW5 KPNA2P1-201ENST00000458289 1591 ntBASIC1.77□□□□□ -2.13
CLN6Q9NWW5 RNU6-858P-201ENST00000362436 107 ntBASIC1.77□□□□□ -2.13
CLN6Q9NWW5 RNU5E-6P-201ENST00000365574 115 ntBASIC1.77□□□□□ -2.13
CLN6Q9NWW5 RNU6-166P-201ENST00000384371 107 ntBASIC1.77□□□□□ -2.13
CLN6Q9NWW5 MIR95-201ENST00000385072 81 ntBASIC1.77□□□□□ -2.13
CLN6Q9NWW5 AC127391.1-201ENST00000411737 98 ntBASIC1.77□□□□□ -2.13
CLN6Q9NWW5 AL139156.1-201ENST00000412785 841 ntBASIC1.77□□□□□ -2.13
CLN6Q9NWW5 AC106883.1-201ENST00000418805 562 ntBASIC1.77□□□□□ -2.13
CLN6Q9NWW5 AL353777.1-201ENST00000425552 326 ntBASIC1.77□□□□□ -2.13
CLN6Q9NWW5 RPL22P17-201ENST00000438729 315 ntBASIC1.77□□□□□ -2.13
CLN6Q9NWW5 CR769776.1-201ENST00000441254 787 ntBASIC1.77□□□□□ -2.13
CLN6Q9NWW5 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.77□□□□□ -2.13
CLN6Q9NWW5 AC003071.1-201ENST00000451219 789 ntBASIC1.77□□□□□ -2.13
CLN6Q9NWW5 SSXP1-201ENST00000453640 473 ntBASIC1.77□□□□□ -2.13
CLN6Q9NWW5 MTND2P39-201ENST00000457230 764 ntBASIC1.77□□□□□ -2.13
CLN6Q9NWW5 AC109927.2-201ENST00000506416 303 ntBASIC1.77□□□□□ -2.13
CLN6Q9NWW5 AC119751.4-201ENST00000507498 357 ntBASIC1.77□□□□□ -2.13
CLN6Q9NWW5 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.77□□□□□ -2.13
CLN6Q9NWW5 SNORA4.4-201ENST00000515921 135 ntBASIC1.77□□□□□ -2.13
CLN6Q9NWW5 RNU2-10P-201ENST00000516375 211 ntBASIC1.77□□□□□ -2.13
CLN6Q9NWW5 RNA5SP137-201ENST00000516833 135 ntBASIC1.77□□□□□ -2.13
CLN6Q9NWW5 RNU6-201P-201ENST00000517100 61 ntBASIC1.77□□□□□ -2.13
CLN6Q9NWW5 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.77□□□□□ -2.13
CLN6Q9NWW5 MIR4287-201ENST00000579398 78 ntBASIC1.77□□□□□ -2.13
CLN6Q9NWW5 MIR5089-201ENST00000580047 84 ntBASIC1.77□□□□□ -2.13
CLN6Q9NWW5 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.77□□□□□ -2.13
CLN6Q9NWW5 AL096840.1-201ENST00000603287 93 ntBASIC1.77□□□□□ -2.13
CLN6Q9NWW5 AL713866.2-201ENST00000603579 219 ntBASIC1.77□□□□□ -2.13
CLN6Q9NWW5 AL139022.2-201ENST00000606934 443 ntBASIC1.77□□□□□ -2.13
CLN6Q9NWW5 AC096772.1-201ENST00000609146 564 ntBASIC1.77□□□□□ -2.13
CLN6Q9NWW5 AC008121.3-201ENST00000618726 433 ntBASIC1.77□□□□□ -2.13
CLN6Q9NWW5 AL356266.1-201ENST00000623311 483 ntBASIC1.77□□□□□ -2.13
CLN6Q9NWW5 AC091953.2-201ENST00000623979 160 ntBASIC1.77□□□□□ -2.13
CLN6Q9NWW5 AC010149.2-201ENST00000637608 315 ntBASIC1.77□□□□□ -2.13
CLN6Q9NWW5 RNU6-395P-201ENST00000365662 106 ntBASIC1.76□□□□□ -2.13
CLN6Q9NWW5 RNU6-946P-201ENST00000383878 107 ntBASIC1.76□□□□□ -2.13
CLN6Q9NWW5 RNU6-809P-201ENST00000384461 107 ntBASIC1.76□□□□□ -2.13
CLN6Q9NWW5 FTH1P15-201ENST00000406984 280 ntBASIC1.76□□□□□ -2.13
CLN6Q9NWW5 SNORA11.1-201ENST00000408133 129 ntBASIC1.76□□□□□ -2.13
CLN6Q9NWW5 AC092809.3-201ENST00000415453 231 ntBASIC1.76□□□□□ -2.13
CLN6Q9NWW5 AC009518.2-201ENST00000418056 731 ntBASIC1.76□□□□□ -2.13
CLN6Q9NWW5 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.76□□□□□ -2.13
CLN6Q9NWW5 EIF1AXP1-201ENST00000419267 435 ntBASIC1.76□□□□□ -2.13
CLN6Q9NWW5 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.76□□□□□ -2.13
CLN6Q9NWW5 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.76□□□□□ -2.13
CLN6Q9NWW5 RPL23AP83-201ENST00000434984 473 ntBASIC1.76□□□□□ -2.13
CLN6Q9NWW5 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.76□□□□□ -2.13
CLN6Q9NWW5 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.76□□□□□ -2.13
CLN6Q9NWW5 PMCHL2-203ENST00000457791 237 ntBASIC1.76□□□□□ -2.13
CLN6Q9NWW5 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.76□□□□□ -2.13
CLN6Q9NWW5 HSPE1P23-201ENST00000509838 286 ntBASIC1.76□□□□□ -2.13
CLN6Q9NWW5 RNU5A-4P-201ENST00000516588 111 ntBASIC1.76□□□□□ -2.13
CLN6Q9NWW5 SNORA48.11-201ENST00000517015 89 ntBASIC1.76□□□□□ -2.13
CLN6Q9NWW5 AC011979.2-201ENST00000527568 352 ntBASIC1.76□□□□□ -2.13
CLN6Q9NWW5 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.76□□□□□ -2.13
CLN6Q9NWW5 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.76□□□□□ -2.13
CLN6Q9NWW5 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.76□□□□□ -2.13
CLN6Q9NWW5 AC009063.1-201ENST00000563342 702 ntBASIC1.76□□□□□ -2.13
CLN6Q9NWW5 MIR1273C-201ENST00000578669 77 ntBASIC1.76□□□□□ -2.13
CLN6Q9NWW5 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.76□□□□□ -2.13
CLN6Q9NWW5 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.76□□□□□ -2.13
CLN6Q9NWW5 AL031274.2-201ENST00000599419 203 ntBASIC1.76□□□□□ -2.13
CLN6Q9NWW5 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.76□□□□□ -2.13
CLN6Q9NWW5 AC174048.1-201ENST00000603389 144 ntBASIC1.76□□□□□ -2.13
CLN6Q9NWW5 AC144521.1-201ENST00000607148 956 ntBASIC1.76□□□□□ -2.13
CLN6Q9NWW5 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.76□□□□□ -2.13
CLN6Q9NWW5 AL627230.6-201ENST00000611129 280 ntBASIC1.76□□□□□ -2.13
CLN6Q9NWW5 Y_RNA.783-201ENST00000613546 102 ntBASIC1.76□□□□□ -2.13
CLN6Q9NWW5 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.76□□□□□ -2.13
CLN6Q9NWW5 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CLN6Q9NWW5 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CLN6Q9NWW5 ZNF876P-202ENST00000398732 1485 ntBASIC1.75□□□□□ -2.13
CLN6Q9NWW5 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CLN6Q9NWW5 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CLN6Q9NWW5 RNU6-1159P-201ENST00000362933 107 ntBASIC1.75□□□□□ -2.13
CLN6Q9NWW5 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CLN6Q9NWW5 MIR561-201ENST00000385216 97 ntBASIC1.75□□□□□ -2.13
CLN6Q9NWW5 AC138623.1-201ENST00000418060 216 ntBASIC1.75□□□□□ -2.13
CLN6Q9NWW5 RPS15AP12-201ENST00000419498 388 ntBASIC1.75□□□□□ -2.13
CLN6Q9NWW5 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.75□□□□□ -2.13
CLN6Q9NWW5 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.75□□□□□ -2.13
CLN6Q9NWW5 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.75□□□□□ -2.13
CLN6Q9NWW5 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.75□□□□□ -2.13
CLN6Q9NWW5 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.75□□□□□ -2.13
CLN6Q9NWW5 AC012308.1-201ENST00000451232 178 ntBASIC1.75□□□□□ -2.13
CLN6Q9NWW5 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CLN6Q9NWW5 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.75□□□□□ -2.13
CLN6Q9NWW5 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.75□□□□□ -2.13
CLN6Q9NWW5 AC022616.6-201ENST00000520479 119 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms