Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 Z84480.1-201ENST00000605131 311 ntBASIC3.01□□□□□ -1.93
BLOC1S4Q9NUP1 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.01□□□□□ -1.93
BLOC1S4Q9NUP1 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.01□□□□□ -1.93
BLOC1S4Q9NUP1 SCARNA4-202ENST00000625402 129 ntBASIC3.01□□□□□ -1.93
BLOC1S4Q9NUP1 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.01□□□□□ -1.93
BLOC1S4Q9NUP1 AC090582.1-201ENST00000636321 199 ntBASIC3.01□□□□□ -1.93
BLOC1S4Q9NUP1 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3□□□□□ -1.93
BLOC1S4Q9NUP1 ANKRD18EP-201ENST00000405487 2632 ntBASIC3□□□□□ -1.93
BLOC1S4Q9NUP1 SNORA80A-201ENST00000363922 136 ntBASIC3□□□□□ -1.93
BLOC1S4Q9NUP1 SNORA62.1-201ENST00000364287 154 ntBASIC3□□□□□ -1.93
BLOC1S4Q9NUP1 SNORA75B-201ENST00000384053 137 ntBASIC3□□□□□ -1.93
BLOC1S4Q9NUP1 SNORA75-201ENST00000384158 137 ntBASIC3□□□□□ -1.93
BLOC1S4Q9NUP1 SNORD116-2-201ENST00000384274 95 ntBASIC3□□□□□ -1.93
BLOC1S4Q9NUP1 SNORD116-6-201ENST00000384711 96 ntBASIC3□□□□□ -1.93
BLOC1S4Q9NUP1 MIR483-201ENST00000385070 76 ntBASIC3□□□□□ -1.93
BLOC1S4Q9NUP1 MTCO2P34-201ENST00000421994 607 ntBASIC3□□□□□ -1.93
BLOC1S4Q9NUP1 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3□□□□□ -1.93
BLOC1S4Q9NUP1 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3□□□□□ -1.93
BLOC1S4Q9NUP1 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3□□□□□ -1.93
BLOC1S4Q9NUP1 Z83846.1-201ENST00000446798 265 ntBASIC3□□□□□ -1.93
BLOC1S4Q9NUP1 AP000936.2-201ENST00000447151 681 ntBASIC3□□□□□ -1.93
BLOC1S4Q9NUP1 AC012308.1-201ENST00000451232 178 ntBASIC3□□□□□ -1.93
BLOC1S4Q9NUP1 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3□□□□□ -1.93
BLOC1S4Q9NUP1 GMFBP1-201ENST00000467831 427 ntBASIC3□□□□□ -1.93
BLOC1S4Q9NUP1 RPS3AP14-201ENST00000483907 780 ntBASIC3□□□□□ -1.93
BLOC1S4Q9NUP1 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3□□□□□ -1.93
BLOC1S4Q9NUP1 RNA5SP385-201ENST00000515947 110 ntBASIC3□□□□□ -1.93
BLOC1S4Q9NUP1 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3□□□□□ -1.93
BLOC1S4Q9NUP1 MIR3199-1-201ENST00000582434 88 ntBASIC3□□□□□ -1.93
BLOC1S4Q9NUP1 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3□□□□□ -1.93
BLOC1S4Q9NUP1 NBR2-204ENST00000587322 63 ntBASIC3□□□□□ -1.93
BLOC1S4Q9NUP1 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3□□□□□ -1.93
BLOC1S4Q9NUP1 AC138627.2-201ENST00000624202 601 ntBASIC3□□□□□ -1.93
BLOC1S4Q9NUP1 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
BLOC1S4Q9NUP1 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3□□□□□ -1.93
BLOC1S4Q9NUP1 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 SNORD14B-201ENST00000364533 90 ntBASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 U8.9-201ENST00000365667 134 ntBASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 RNU6-606P-201ENST00000384721 111 ntBASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 SNORA26.7-201ENST00000391288 122 ntBASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 RNU4-46P-201ENST00000410818 138 ntBASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 RNU6-1328P-201ENST00000410938 106 ntBASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 RPL19P1-201ENST00000411635 428 ntBASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 MTCO2P16-201ENST00000436962 677 ntBASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 AC104389.3-201ENST00000445629 235 ntBASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 AC132479.1-201ENST00000449160 144 ntBASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 AP001324.2-201ENST00000461163 319 ntBASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 AL121769.1-201ENST00000469473 401 ntBASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 AC079382.1-201ENST00000493346 557 ntBASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 AC104136.1-201ENST00000512969 394 ntBASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 RNU5B-3P-201ENST00000516601 115 ntBASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 AC138761.3-201ENST00000579993 334 ntBASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 MIR4775-201ENST00000581168 75 ntBASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 MIR4506-201ENST00000584693 77 ntBASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 AC119751.7-201ENST00000600494 245 ntBASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 AC008121.1-201ENST00000603244 268 ntBASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 ATP1B3P1-201ENST00000605365 821 ntBASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 AL021997.1-201ENST00000605757 193 ntBASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 RN7SKP299-201ENST00000606679 301 ntBASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 AC069294.1-201ENST00000608397 350 ntBASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 AC096772.1-201ENST00000609146 564 ntBASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 AL359740.1-201ENST00000624340 592 ntBASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 MIR6733-201ENST00000635723 61 ntBASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 LRRC77P-213ENST00000637727 880 ntBASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
BLOC1S4Q9NUP1 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 RNU6-282P-201ENST00000365357 103 ntBASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 MIR1-2-201ENST00000384961 85 ntBASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 MIR10A-201ENST00000385043 110 ntBASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 MIR9-1-201ENST00000385198 89 ntBASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 RAP1BP3-201ENST00000407180 549 ntBASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 U6atac.2-201ENST00000408644 118 ntBASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 Z92545.1-201ENST00000411782 234 ntBASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 EEF1A1P40-201ENST00000412883 573 ntBASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 AL031779.1-201ENST00000415663 330 ntBASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 AL353621.1-201ENST00000418219 243 ntBASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 Z98742.2-201ENST00000431564 187 ntBASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 AL596276.1-201ENST00000434465 418 ntBASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 MTND4P32-201ENST00000437189 1237 ntBASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 RPL21P2-201ENST00000440049 481 ntBASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 AL031667.1-201ENST00000440222 725 ntBASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 AC025750.2-201ENST00000442609 450 ntBASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 AL360221.1-201ENST00000445989 335 ntBASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 HIGD1AP2-201ENST00000446367 280 ntBASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 RPL23AP20-201ENST00000447965 421 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms