Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 AC098848.2-201ENST00000588023 330 ntBASIC2.41□□□□□ -2.02
ZCCHC3Q9NUD5 AL138889.2-201ENST00000603883 242 ntBASIC2.41□□□□□ -2.02
ZCCHC3Q9NUD5 AC005000.2-201ENST00000605468 310 ntBASIC2.41□□□□□ -2.02
ZCCHC3Q9NUD5 AC069294.1-201ENST00000608397 350 ntBASIC2.41□□□□□ -2.02
ZCCHC3Q9NUD5 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.41□□□□□ -2.02
ZCCHC3Q9NUD5 AC010378.1-201ENST00000619270 362 ntBASIC2.41□□□□□ -2.02
ZCCHC3Q9NUD5 AC024581.2-201ENST00000619986 252 ntBASIC2.41□□□□□ -2.02
ZCCHC3Q9NUD5 AC244517.12-201ENST00000623581 663 ntBASIC2.41□□□□□ -2.02
ZCCHC3Q9NUD5 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.41□□□□□ -2.02
ZCCHC3Q9NUD5 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
ZCCHC3Q9NUD5 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
ZCCHC3Q9NUD5 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.41□□□□□ -2.02
ZCCHC3Q9NUD5 RNU6-7-201ENST00000364784 107 ntBASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 RNU6-8-201ENST00000365467 107 ntBASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 MIR578-201ENST00000384828 96 ntBASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 UBE2V1P2-201ENST00000397758 440 ntBASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 SNORA11.1-201ENST00000408133 129 ntBASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 AC096664.2-201ENST00000411843 406 ntBASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 AC007064.1-201ENST00000412238 351 ntBASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 COTL1P1-201ENST00000422309 375 ntBASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 GPR143P-201ENST00000434155 205 ntBASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 AC025750.2-201ENST00000442609 450 ntBASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 RPL22P13-201ENST00000493291 347 ntBASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 TBCAP3-201ENST00000512475 312 ntBASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 OR5AQ1P-201ENST00000527596 927 ntBASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 AC243972.3-201ENST00000539655 198 ntBASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 AC025678.1-201ENST00000567861 338 ntBASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 AC012213.3-201ENST00000577199 777 ntBASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 AC105245.1-201ENST00000581934 244 ntBASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 AL590229.1-201ENST00000603497 542 ntBASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 AC245014.2-201ENST00000603689 287 ntBASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 AL670379.10-201ENST00000604330 253 ntBASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 AL049779.4-201ENST00000604500 156 ntBASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 AC246785.4-201ENST00000605374 287 ntBASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 AL670379.9-201ENST00000605428 253 ntBASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 RNU6-91P-201ENST00000607774 107 ntBASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
ZCCHC3Q9NUD5 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 Z82209.1-201ENST00000422141 2135 ntBASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 MTND5P17-201ENST00000418405 1603 ntBASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 AL365361.1-201ENST00000566942 3481 ntBASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 SNORD14B-201ENST00000364533 90 ntBASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 SNORA67.1-201ENST00000364749 141 ntBASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 Y_RNA.367-201ENST00000365544 101 ntBASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 RNU6-108P-201ENST00000365558 107 ntBASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 FTH1P15-201ENST00000406984 280 ntBASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 U3.37-201ENST00000408528 213 ntBASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 EEF1A1P40-201ENST00000412883 573 ntBASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 AL353621.1-201ENST00000418219 243 ntBASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 AP000936.2-201ENST00000447151 681 ntBASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 RPL36AP48-201ENST00000485521 314 ntBASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 MRPL42P6-201ENST00000486397 371 ntBASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 AC011005.2-201ENST00000487324 359 ntBASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 AC018437.1-201ENST00000492214 406 ntBASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 AC097462.2-201ENST00000504623 481 ntBASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 MTCO3P28-201ENST00000513351 515 ntBASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 RNU5B-3P-201ENST00000516601 115 ntBASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 RANP3-201ENST00000530970 276 ntBASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 GTF3AP2-201ENST00000557014 266 ntBASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 Z99497.2-201ENST00000603634 310 ntBASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 MIR98-201ENST00000606724 119 ntBASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 AC073114.1-201ENST00000612027 490 ntBASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 AC011890.2-201ENST00000613393 294 ntBASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 AC008147.4-201ENST00000617570 1204 ntBASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 U6.42-201ENST00000618440 107 ntBASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 AC092656.1-203ENST00000624134 423 ntBASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 AC006386.2-201ENST00000624491 75 ntBASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 AC012005.1-201ENST00000624575 75 ntBASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
ZCCHC3Q9NUD5 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
ZCCHC3Q9NUD5 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
ZCCHC3Q9NUD5 RNU6-1097P-201ENST00000363586 107 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms