Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.25□□□□□ -1.89
SMC4Q9NTJ3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.25□□□□□ -1.89
SMC4Q9NTJ3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SMC4Q9NTJ3 ADI1P3-201ENST00000549509 470 ntBASIC3.25□□□□□ -1.89
SMC4Q9NTJ3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
SMC4Q9NTJ3 AL161734.1-201ENST00000609720 557 ntBASIC3.25□□□□□ -1.89
SMC4Q9NTJ3 AC091834.1-201ENST00000614543 472 ntBASIC3.25□□□□□ -1.89
SMC4Q9NTJ3 AC099842.1-201ENST00000619919 596 ntBASIC3.25□□□□□ -1.89
SMC4Q9NTJ3 MTND5P17-201ENST00000418405 1603 ntBASIC3.25□□□□□ -1.89
SMC4Q9NTJ3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.25□□□□□ -1.89
SMC4Q9NTJ3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.25□□□□□ -1.89
SMC4Q9NTJ3 Z82195.2-201ENST00000612348 18351 ntBASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 Y_RNA.33-201ENST00000362591 102 ntBASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 SNORD56.5-201ENST00000364281 72 ntBASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 RNU6-61P-201ENST00000365528 109 ntBASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 Y_RNA.559-201ENST00000384686 107 ntBASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 SNORA40C-201ENST00000391285 128 ntBASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 AL513477.1-202ENST00000417061 214 ntBASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 MYL8P-204ENST00000431574 518 ntBASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 FABP5P13-201ENST00000452144 328 ntBASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 AC133134.1-201ENST00000466800 359 ntBASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 RNA5SP320-201ENST00000516263 124 ntBASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 AC006199.1-201ENST00000548728 219 ntBASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 AC007151.1-201ENST00000572774 483 ntBASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 MIR4782-201ENST00000577987 79 ntBASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 MIR3162-201ENST00000581818 82 ntBASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 MIR5092-201ENST00000583139 88 ntBASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 AC087683.1-201ENST00000591187 441 ntBASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 AL391813.1-201ENST00000603098 260 ntBASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 RPL12P50-201ENST00000603116 116 ntBASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 AC006023.1-201ENST00000603944 259 ntBASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 MIR98-201ENST00000606724 119 ntBASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 AP001486.3-201ENST00000615334 372 ntBASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 AC072046.2-201ENST00000618366 268 ntBASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.24□□□□□ -1.89
SMC4Q9NTJ3 AC026241.1-201ENST00000517873 2142 ntBASIC3.23□□□□□ -1.89
SMC4Q9NTJ3 CDC27P3-201ENST00000635418 1910 ntBASIC3.23□□□□□ -1.89
SMC4Q9NTJ3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SMC4Q9NTJ3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.23□□□□□ -1.89
SMC4Q9NTJ3 MTCO3P5-201ENST00000433620 714 ntBASIC3.23□□□□□ -1.89
SMC4Q9NTJ3 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.23□□□□□ -1.89
SMC4Q9NTJ3 RPS15AP9-201ENST00000439856 381 ntBASIC3.23□□□□□ -1.89
SMC4Q9NTJ3 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.23□□□□□ -1.89
SMC4Q9NTJ3 UBBP3-201ENST00000445497 241 ntBASIC3.23□□□□□ -1.89
SMC4Q9NTJ3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.23□□□□□ -1.89
SMC4Q9NTJ3 AC116562.3-201ENST00000506136 177 ntBASIC3.23□□□□□ -1.89
SMC4Q9NTJ3 AC025755.1-201ENST00000521306 278 ntBASIC3.23□□□□□ -1.89
SMC4Q9NTJ3 AC068587.5-201ENST00000528506 175 ntBASIC3.23□□□□□ -1.89
SMC4Q9NTJ3 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.23□□□□□ -1.89
SMC4Q9NTJ3 AC004486.1-201ENST00000546846 233 ntBASIC3.23□□□□□ -1.89
SMC4Q9NTJ3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.23□□□□□ -1.89
SMC4Q9NTJ3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.23□□□□□ -1.89
SMC4Q9NTJ3 AL121992.2-201ENST00000606262 256 ntBASIC3.23□□□□□ -1.89
SMC4Q9NTJ3 MIR6134-201ENST00000617606 109 ntBASIC3.23□□□□□ -1.89
SMC4Q9NTJ3 AC136475.10-201ENST00000620253 385 ntBASIC3.23□□□□□ -1.89
SMC4Q9NTJ3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SMC4Q9NTJ3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SMC4Q9NTJ3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SMC4Q9NTJ3 ADAM3A-203ENST00000461344 2157 ntBASIC3.22□□□□□ -1.89
SMC4Q9NTJ3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SMC4Q9NTJ3 RNU6-179P-201ENST00000363350 107 ntBASIC3.22□□□□□ -1.89
SMC4Q9NTJ3 RNU6-1025P-201ENST00000410629 104 ntBASIC3.22□□□□□ -1.89
SMC4Q9NTJ3 RNU2-66P-201ENST00000410650 161 ntBASIC3.22□□□□□ -1.89
SMC4Q9NTJ3 AC133104.1-201ENST00000429100 218 ntBASIC3.22□□□□□ -1.89
SMC4Q9NTJ3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.22□□□□□ -1.89
SMC4Q9NTJ3 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.22□□□□□ -1.89
SMC4Q9NTJ3 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.22□□□□□ -1.89
SMC4Q9NTJ3 TPTE2P5-203ENST00000458118 728 ntBASIC3.22□□□□□ -1.89
SMC4Q9NTJ3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.22□□□□□ -1.89
SMC4Q9NTJ3 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.22□□□□□ -1.89
SMC4Q9NTJ3 RNU5F-8P-201ENST00000515941 111 ntBASIC3.22□□□□□ -1.89
SMC4Q9NTJ3 RNU6-572P-201ENST00000516724 80 ntBASIC3.22□□□□□ -1.89
SMC4Q9NTJ3 SNORA31.19-201ENST00000517079 126 ntBASIC3.22□□□□□ -1.89
SMC4Q9NTJ3 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.22□□□□□ -1.89
SMC4Q9NTJ3 AP001646.1-201ENST00000527936 915 ntBASIC3.22□□□□□ -1.89
SMC4Q9NTJ3 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.22□□□□□ -1.89
SMC4Q9NTJ3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.22□□□□□ -1.89
SMC4Q9NTJ3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SMC4Q9NTJ3 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.22□□□□□ -1.89
SMC4Q9NTJ3 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.22□□□□□ -1.89
SMC4Q9NTJ3 AC009063.1-201ENST00000563342 702 ntBASIC3.22□□□□□ -1.89
SMC4Q9NTJ3 AC068790.2-201ENST00000602601 557 ntBASIC3.22□□□□□ -1.89
SMC4Q9NTJ3 U6.99-201ENST00000637524 83 ntBASIC3.22□□□□□ -1.89
SMC4Q9NTJ3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SMC4Q9NTJ3 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SMC4Q9NTJ3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SMC4Q9NTJ3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
SMC4Q9NTJ3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms