Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 Z82205.1-201ENST00000428456 297 ntBASIC0.47□□□□□ -2.33
CDC42SE2Q9NRR3 RPL31P54-201ENST00000429803 370 ntBASIC0.47□□□□□ -2.33
CDC42SE2Q9NRR3 TRIM60P13-201ENST00000432350 1283 ntBASIC0.47□□□□□ -2.33
CDC42SE2Q9NRR3 AC104058.1-201ENST00000448028 297 ntBASIC0.47□□□□□ -2.33
CDC42SE2Q9NRR3 MEMO1P3-201ENST00000459811 302 ntBASIC0.47□□□□□ -2.33
CDC42SE2Q9NRR3 PSMC1P5-201ENST00000512850 177 ntBASIC0.47□□□□□ -2.33
CDC42SE2Q9NRR3 SNORD116-28-201ENST00000516123 91 ntBASIC0.47□□□□□ -2.33
CDC42SE2Q9NRR3 SNORA31.17-201ENST00000516953 127 ntBASIC0.47□□□□□ -2.33
CDC42SE2Q9NRR3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.47□□□□□ -2.33
CDC42SE2Q9NRR3 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
CDC42SE2Q9NRR3 AC012213.3-201ENST00000577199 777 ntBASIC0.47□□□□□ -2.33
CDC42SE2Q9NRR3 SNORA77B-201ENST00000578179 125 ntBASIC0.47□□□□□ -2.33
CDC42SE2Q9NRR3 MIR4524B-201ENST00000581569 115 ntBASIC0.47□□□□□ -2.33
CDC42SE2Q9NRR3 DUXAP11-201ENST00000603858 526 ntBASIC0.47□□□□□ -2.33
CDC42SE2Q9NRR3 snoU13.31-201ENST00000607291 104 ntBASIC0.47□□□□□ -2.33
CDC42SE2Q9NRR3 AC108706.1-201ENST00000611053 297 ntBASIC0.47□□□□□ -2.33
CDC42SE2Q9NRR3 AC013476.2-201ENST00000614456 459 ntBASIC0.47□□□□□ -2.33
CDC42SE2Q9NRR3 AC073569.3-201ENST00000619055 682 ntBASIC0.47□□□□□ -2.33
CDC42SE2Q9NRR3 AC009950.2-201ENST00000636548 183 ntBASIC0.47□□□□□ -2.33
CDC42SE2Q9NRR3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.46□□□□□ -2.34
CDC42SE2Q9NRR3 SNORA18.2-201ENST00000383865 132 ntBASIC0.46□□□□□ -2.34
CDC42SE2Q9NRR3 RNU6-891P-201ENST00000384280 111 ntBASIC0.46□□□□□ -2.34
CDC42SE2Q9NRR3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
CDC42SE2Q9NRR3 RPL26P27-201ENST00000414397 437 ntBASIC0.46□□□□□ -2.34
CDC42SE2Q9NRR3 AC009518.2-201ENST00000418056 731 ntBASIC0.46□□□□□ -2.34
CDC42SE2Q9NRR3 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.46□□□□□ -2.34
CDC42SE2Q9NRR3 NANOGP2-201ENST00000435391 727 ntBASIC0.46□□□□□ -2.34
CDC42SE2Q9NRR3 SNRPEP9-201ENST00000436794 238 ntBASIC0.46□□□□□ -2.34
CDC42SE2Q9NRR3 AC244505.5-201ENST00000443639 207 ntBASIC0.46□□□□□ -2.34
CDC42SE2Q9NRR3 MTCO3P17-201ENST00000443775 513 ntBASIC0.46□□□□□ -2.34
CDC42SE2Q9NRR3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
CDC42SE2Q9NRR3 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
CDC42SE2Q9NRR3 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.46□□□□□ -2.34
CDC42SE2Q9NRR3 AC079598.5-201ENST00000547460 117 ntBASIC0.46□□□□□ -2.34
CDC42SE2Q9NRR3 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.46□□□□□ -2.34
CDC42SE2Q9NRR3 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.46□□□□□ -2.34
CDC42SE2Q9NRR3 MIR3937-201ENST00000580135 106 ntBASIC0.46□□□□□ -2.34
CDC42SE2Q9NRR3 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC0.46□□□□□ -2.34
CDC42SE2Q9NRR3 NDUFA8P1-201ENST00000605525 367 ntBASIC0.46□□□□□ -2.34
CDC42SE2Q9NRR3 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.46□□□□□ -2.34
CDC42SE2Q9NRR3 MIR8065-201ENST00000620577 100 ntBASIC0.46□□□□□ -2.34
CDC42SE2Q9NRR3 MIR6835-201ENST00000621552 64 ntBASIC0.46□□□□□ -2.34
CDC42SE2Q9NRR3 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.46□□□□□ -2.34
CDC42SE2Q9NRR3 U2.21-201ENST00000637295 81 ntBASIC0.46□□□□□ -2.34
CDC42SE2Q9NRR3 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.46□□□□□ -2.34
CDC42SE2Q9NRR3 ATM-230ENST00000640388 578 ntTSL 5 BASIC0.46□□□□□ -2.34
CDC42SE2Q9NRR3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.46□□□□□ -2.34
CDC42SE2Q9NRR3 MIR373-201ENST00000362273 69 ntBASIC0.45□□□□□ -2.34
CDC42SE2Q9NRR3 MIR506-201ENST00000384998 124 ntBASIC0.45□□□□□ -2.34
CDC42SE2Q9NRR3 TPMTP3-201ENST00000411928 735 ntBASIC0.45□□□□□ -2.34
CDC42SE2Q9NRR3 HMGN1P14-201ENST00000412459 517 ntBASIC0.45□□□□□ -2.34
CDC42SE2Q9NRR3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.45□□□□□ -2.34
CDC42SE2Q9NRR3 AL592045.1-201ENST00000429867 352 ntBASIC0.45□□□□□ -2.34
CDC42SE2Q9NRR3 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.45□□□□□ -2.34
CDC42SE2Q9NRR3 HSPE1P13-201ENST00000451143 297 ntBASIC0.45□□□□□ -2.34
CDC42SE2Q9NRR3 AC117454.1-201ENST00000491120 168 ntBASIC0.45□□□□□ -2.34
CDC42SE2Q9NRR3 HMGN1P7-201ENST00000491722 313 ntBASIC0.45□□□□□ -2.34
CDC42SE2Q9NRR3 AC145146.1-201ENST00000496370 254 ntBASIC0.45□□□□□ -2.34
CDC42SE2Q9NRR3 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.45□□□□□ -2.34
CDC42SE2Q9NRR3 AC008837.2-201ENST00000513076 418 ntBASIC0.45□□□□□ -2.34
CDC42SE2Q9NRR3 RN7SKP265-201ENST00000516448 223 ntBASIC0.45□□□□□ -2.34
CDC42SE2Q9NRR3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.45□□□□□ -2.34
CDC42SE2Q9NRR3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.45□□□□□ -2.34
CDC42SE2Q9NRR3 ARL2BPP5-201ENST00000523141 481 ntBASIC0.45□□□□□ -2.34
CDC42SE2Q9NRR3 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.45□□□□□ -2.34
CDC42SE2Q9NRR3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.45□□□□□ -2.34
CDC42SE2Q9NRR3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.45□□□□□ -2.34
CDC42SE2Q9NRR3 AL121821.2-201ENST00000556081 394 ntBASIC0.45□□□□□ -2.34
CDC42SE2Q9NRR3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.45□□□□□ -2.34
CDC42SE2Q9NRR3 CYP3A52P-201ENST00000563326 91 ntBASIC0.45□□□□□ -2.34
CDC42SE2Q9NRR3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.45□□□□□ -2.34
CDC42SE2Q9NRR3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.45□□□□□ -2.34
CDC42SE2Q9NRR3 AC239868.4-201ENST00000608318 671 ntBASIC0.45□□□□□ -2.34
CDC42SE2Q9NRR3 AC104820.1-201ENST00000624183 307 ntBASIC0.45□□□□□ -2.34
CDC42SE2Q9NRR3 AL159972.1-201ENST00000625150 448 ntBASIC0.45□□□□□ -2.34
CDC42SE2Q9NRR3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.45□□□□□ -2.34
CDC42SE2Q9NRR3 AL133216.2-202ENST00000634512 349 ntBASIC0.45□□□□□ -2.34
CDC42SE2Q9NRR3 MIR4275-201ENST00000636486 87 ntBASIC0.45□□□□□ -2.34
CDC42SE2Q9NRR3 HAUS6P2-201ENST00000433254 2404 ntBASIC0.45□□□□□ -2.34
CDC42SE2Q9NRR3 SNORD114-27-201ENST00000363766 70 ntBASIC0.44□□□□□ -2.34
CDC42SE2Q9NRR3 RNU6-1164P-201ENST00000364428 107 ntBASIC0.44□□□□□ -2.34
CDC42SE2Q9NRR3 RPL22P22-201ENST00000395439 379 ntBASIC0.44□□□□□ -2.34
CDC42SE2Q9NRR3 Z86062.1-201ENST00000406773 777 ntBASIC0.44□□□□□ -2.34
CDC42SE2Q9NRR3 RPS15AP12-201ENST00000419498 388 ntBASIC0.44□□□□□ -2.34
CDC42SE2Q9NRR3 CALM1P1-201ENST00000442082 433 ntBASIC0.44□□□□□ -2.34
CDC42SE2Q9NRR3 PRELID3BP1-201ENST00000457142 540 ntBASIC0.44□□□□□ -2.34
CDC42SE2Q9NRR3 RPL31P3-201ENST00000458430 332 ntBASIC0.44□□□□□ -2.34
CDC42SE2Q9NRR3 AC112771.1-201ENST00000463581 102 ntBASIC0.44□□□□□ -2.34
CDC42SE2Q9NRR3 RNU6-322P-201ENST00000516010 103 ntBASIC0.44□□□□□ -2.34
CDC42SE2Q9NRR3 RNVU1-2-201ENST00000516326 135 ntBASIC0.44□□□□□ -2.34
CDC42SE2Q9NRR3 NRON-201ENST00000517270 370 ntBASIC0.44□□□□□ -2.34
CDC42SE2Q9NRR3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.44□□□□□ -2.34
CDC42SE2Q9NRR3 AC136628.3-201ENST00000521868 290 ntBASIC0.44□□□□□ -2.34
CDC42SE2Q9NRR3 AC004817.2-201ENST00000561794 651 ntBASIC0.44□□□□□ -2.34
CDC42SE2Q9NRR3 AP001429.1-201ENST00000602568 530 ntBASIC0.44□□□□□ -2.34
CDC42SE2Q9NRR3 AL590095.2-201ENST00000604136 117 ntBASIC0.44□□□□□ -2.34
CDC42SE2Q9NRR3 AC112220.3-201ENST00000605502 502 ntBASIC0.44□□□□□ -2.34
CDC42SE2Q9NRR3 AL359821.1-201ENST00000605519 182 ntBASIC0.44□□□□□ -2.34
CDC42SE2Q9NRR3 AC087045.1-201ENST00000605856 382 ntBASIC0.44□□□□□ -2.34
CDC42SE2Q9NRR3 AL022345.2-201ENST00000606307 135 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms