Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 RPL26P6-201ENST00000440913 438 ntBASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 OSTCP8-201ENST00000445117 448 ntBASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 AL583843.1-201ENST00000456070 346 ntBASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 RPL23AP31-201ENST00000456160 467 ntBASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 RN7SL601P-201ENST00000471221 293 ntBASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 RPL17P19-201ENST00000489069 552 ntBASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 AC022447.4-201ENST00000504053 364 ntBASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 LRRC37A5P-203ENST00000580181 585 ntBASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 Z98751.3-201ENST00000604447 521 ntBASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 HMGB1P24-202ENST00000615653 685 ntBASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 SNORD39.4-201ENST00000620099 78 ntBASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 MIR8062-201ENST00000621515 85 ntBASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 AC068254.2-201ENST00000623938 3577 ntBASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 RNU6-874P-201ENST00000362390 105 ntBASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 SNORA36C-201ENST00000384289 132 ntBASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 Y_RNA.489-201ENST00000384410 101 ntBASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 RNU6-174P-201ENST00000410406 106 ntBASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 RNU6-607P-201ENST00000411283 108 ntBASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 AL160275.2-201ENST00000412010 394 ntBASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 ATP5A1P2-201ENST00000412323 255 ntBASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 UBE2D3P2-201ENST00000424409 445 ntBASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 RPS24P13-201ENST00000442520 397 ntBASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 AC108860.1-201ENST00000484521 383 ntBASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 AC007458.1-201ENST00000542812 373 ntBASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 AC090877.1-201ENST00000561418 344 ntBASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 FAM60BP-201ENST00000578364 658 ntBASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 SCARNA15.3-201ENST00000626315 122 ntBASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 SCARNA4.1-201ENST00000628597 123 ntBASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 MIR4272-201ENST00000635924 64 ntBASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.25□□□□□ -1.73
PDLIM7Q9NR12 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 AC005183.1-201ENST00000603687 1979 ntBASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 RNU6-50P-201ENST00000362356 103 ntBASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 SNORD74.4-201ENST00000364129 80 ntBASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 RNU6-596P-201ENST00000365395 98 ntBASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 RNU6-1026P-201ENST00000384465 108 ntBASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 RNU2-3P-201ENST00000410144 191 ntBASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 RNU6-1156P-201ENST00000410365 100 ntBASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 TOMM22P1-201ENST00000418578 312 ntBASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 RPS15AP6-201ENST00000420703 385 ntBASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 MTATP6P4-201ENST00000427725 675 ntBASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 AL592045.1-201ENST00000429867 352 ntBASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 SNORA71B-202ENST00000439232 272 ntBASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 RPS3AP46-201ENST00000448352 682 ntBASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 SUMO2P6-201ENST00000505273 288 ntBASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 RNU6-1143P-201ENST00000516125 104 ntBASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 RNA5SP154-201ENST00000516193 111 ntBASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 Y_RNA.715-201ENST00000517082 110 ntBASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 MIR5188-201ENST00000583467 113 ntBASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 AC016727.2-201ENST00000603988 621 ntBASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 HMGB1P50-201ENST00000605814 607 ntBASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 AL591516.1-201ENST00000611326 274 ntBASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 AC004825.2-201ENST00000616634 455 ntBASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms