Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC010615.1-201ENST00000594254 1764 ntBASIC4.05□□□□□ -1.76
CD248Q9HCU0 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CD248Q9HCU0 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CD248Q9HCU0 RNA5SP235-201ENST00000365411 114 ntBASIC4.05□□□□□ -1.76
CD248Q9HCU0 RNU6-629P-201ENST00000384061 103 ntBASIC4.05□□□□□ -1.76
CD248Q9HCU0 MIR449B-201ENST00000384995 97 ntBASIC4.05□□□□□ -1.76
CD248Q9HCU0 RNU6-55P-201ENST00000411092 107 ntBASIC4.05□□□□□ -1.76
CD248Q9HCU0 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.05□□□□□ -1.76
CD248Q9HCU0 SNORD127-201ENST00000458892 86 ntBASIC4.05□□□□□ -1.76
CD248Q9HCU0 RPS27AP1-201ENST00000475545 471 ntBASIC4.05□□□□□ -1.76
CD248Q9HCU0 AC135721.1-201ENST00000497954 479 ntBASIC4.05□□□□□ -1.76
CD248Q9HCU0 HMGB3P17-201ENST00000504195 649 ntBASIC4.05□□□□□ -1.76
CD248Q9HCU0 RNU6-789P-201ENST00000517105 102 ntBASIC4.05□□□□□ -1.76
CD248Q9HCU0 SNORA31.20-201ENST00000517111 133 ntBASIC4.05□□□□□ -1.76
CD248Q9HCU0 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CD248Q9HCU0 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.05□□□□□ -1.76
CD248Q9HCU0 AC026371.1-201ENST00000551867 419 ntBASIC4.05□□□□□ -1.76
CD248Q9HCU0 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.05□□□□□ -1.76
CD248Q9HCU0 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.05□□□□□ -1.76
CD248Q9HCU0 MIR3128-201ENST00000581957 66 ntBASIC4.05□□□□□ -1.76
CD248Q9HCU0 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.05□□□□□ -1.76
CD248Q9HCU0 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.05□□□□□ -1.76
CD248Q9HCU0 MIR7702-201ENST00000621931 59 ntBASIC4.05□□□□□ -1.76
CD248Q9HCU0 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.05□□□□□ -1.76
CD248Q9HCU0 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
CD248Q9HCU0 AC233263.6-201ENST00000631132 1963 ntBASIC4.05□□□□□ -1.76
CD248Q9HCU0 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CD248Q9HCU0 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CD248Q9HCU0 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CD248Q9HCU0 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CD248Q9HCU0 AC118273.1-201ENST00000525324 3006 ntBASIC4.04□□□□□ -1.76
CD248Q9HCU0 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CD248Q9HCU0 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CD248Q9HCU0 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
CD248Q9HCU0 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CD248Q9HCU0 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CD248Q9HCU0 RNU6-434P-201ENST00000384376 107 ntBASIC4.04□□□□□ -1.76
CD248Q9HCU0 RPL21P1-201ENST00000399532 476 ntBASIC4.04□□□□□ -1.76
CD248Q9HCU0 MIR1302-6-201ENST00000408466 90 ntBASIC4.04□□□□□ -1.76
CD248Q9HCU0 RNU6-293P-201ENST00000411259 106 ntBASIC4.04□□□□□ -1.76
CD248Q9HCU0 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.04□□□□□ -1.76
CD248Q9HCU0 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.04□□□□□ -1.76
CD248Q9HCU0 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.04□□□□□ -1.76
CD248Q9HCU0 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.04□□□□□ -1.76
CD248Q9HCU0 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.04□□□□□ -1.76
CD248Q9HCU0 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CD248Q9HCU0 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.04□□□□□ -1.76
CD248Q9HCU0 AC117503.1-201ENST00000472241 394 ntBASIC4.04□□□□□ -1.76
CD248Q9HCU0 RN7SL432P-201ENST00000484057 298 ntBASIC4.04□□□□□ -1.76
CD248Q9HCU0 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.04□□□□□ -1.76
CD248Q9HCU0 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.04□□□□□ -1.76
CD248Q9HCU0 IGHV3-76-201ENST00000522465 295 ntBASIC4.04□□□□□ -1.76
CD248Q9HCU0 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.04□□□□□ -1.76
CD248Q9HCU0 AC091516.1-201ENST00000549191 703 ntBASIC4.04□□□□□ -1.76
CD248Q9HCU0 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.04□□□□□ -1.76
CD248Q9HCU0 AL137100.2-201ENST00000555786 315 ntBASIC4.04□□□□□ -1.76
CD248Q9HCU0 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.04□□□□□ -1.76
CD248Q9HCU0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.04□□□□□ -1.76
CD248Q9HCU0 MIR5047-201ENST00000579212 100 ntBASIC4.04□□□□□ -1.76
CD248Q9HCU0 AC024220.1-201ENST00000603675 484 ntBASIC4.04□□□□□ -1.76
CD248Q9HCU0 AC025588.3-201ENST00000604182 274 ntBASIC4.04□□□□□ -1.76
CD248Q9HCU0 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CD248Q9HCU0 SNORA51-201ENST00000606420 132 ntBASIC4.04□□□□□ -1.76
CD248Q9HCU0 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.04□□□□□ -1.76
CD248Q9HCU0 AC098479.1-201ENST00000609225 154 ntBASIC4.04□□□□□ -1.76
CD248Q9HCU0 AL161423.1-201ENST00000613700 262 ntBASIC4.04□□□□□ -1.76
CD248Q9HCU0 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CD248Q9HCU0 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
CD248Q9HCU0 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CD248Q9HCU0 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CD248Q9HCU0 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CD248Q9HCU0 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CD248Q9HCU0 Y_RNA.60-201ENST00000362831 98 ntBASIC4.03□□□□□ -1.76
CD248Q9HCU0 RNU6-1284P-201ENST00000363701 100 ntBASIC4.03□□□□□ -1.76
CD248Q9HCU0 SNORA20.1-201ENST00000364790 130 ntBASIC4.03□□□□□ -1.76
CD248Q9HCU0 SNORD14.1-201ENST00000365609 90 ntBASIC4.03□□□□□ -1.76
CD248Q9HCU0 RNU6-946P-201ENST00000383878 107 ntBASIC4.03□□□□□ -1.76
CD248Q9HCU0 SNORA41-201ENST00000384675 132 ntBASIC4.03□□□□□ -1.76
CD248Q9HCU0 MIR30B-201ENST00000384850 88 ntBASIC4.03□□□□□ -1.76
CD248Q9HCU0 MIR184-201ENST00000384962 84 ntBASIC4.03□□□□□ -1.76
CD248Q9HCU0 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.03□□□□□ -1.76
CD248Q9HCU0 AC096664.2-201ENST00000411843 406 ntBASIC4.03□□□□□ -1.76
CD248Q9HCU0 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.03□□□□□ -1.76
CD248Q9HCU0 MRPS18CP6-201ENST00000423587 223 ntBASIC4.03□□□□□ -1.76
CD248Q9HCU0 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.03□□□□□ -1.76
CD248Q9HCU0 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.03□□□□□ -1.76
CD248Q9HCU0 HMGB3P8-201ENST00000449709 577 ntBASIC4.03□□□□□ -1.76
CD248Q9HCU0 AC096745.1-201ENST00000509945 370 ntBASIC4.03□□□□□ -1.76
CD248Q9HCU0 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.03□□□□□ -1.76
CD248Q9HCU0 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.03□□□□□ -1.76
CD248Q9HCU0 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.03□□□□□ -1.76
CD248Q9HCU0 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.03□□□□□ -1.76
CD248Q9HCU0 AL121603.1-201ENST00000553815 142 ntBASIC4.03□□□□□ -1.76
CD248Q9HCU0 RPL23AP84-201ENST00000571193 464 ntBASIC4.03□□□□□ -1.76
CD248Q9HCU0 RPL23AP87-202ENST00000573039 466 ntBASIC4.03□□□□□ -1.76
CD248Q9HCU0 AC025627.2-201ENST00000576220 160 ntBASIC4.03□□□□□ -1.76
CD248Q9HCU0 SNORD84-203ENST00000584275 78 ntBASIC4.03□□□□□ -1.76
CD248Q9HCU0 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.03□□□□□ -1.76
CD248Q9HCU0 AL670379.6-201ENST00000603753 252 ntBASIC4.03□□□□□ -1.76
CD248Q9HCU0 AL670379.1-201ENST00000604752 252 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 199.9 ms