Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 MIR9-1-201ENST00000385198 89 ntBASIC2.51□□□□□ -2.01
VIPAS39Q9H9C1 AL356057.3-201ENST00000402607 340 ntBASIC2.51□□□□□ -2.01
VIPAS39Q9H9C1 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.51□□□□□ -2.01
VIPAS39Q9H9C1 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.51□□□□□ -2.01
VIPAS39Q9H9C1 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.51□□□□□ -2.01
VIPAS39Q9H9C1 AC098614.2-201ENST00000426040 255 ntBASIC2.51□□□□□ -2.01
VIPAS39Q9H9C1 HMGB1P9-201ENST00000429856 646 ntBASIC2.51□□□□□ -2.01
VIPAS39Q9H9C1 AL451074.3-201ENST00000437709 472 ntBASIC2.51□□□□□ -2.01
VIPAS39Q9H9C1 HMGN2P10-201ENST00000448085 265 ntBASIC2.51□□□□□ -2.01
VIPAS39Q9H9C1 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.51□□□□□ -2.01
VIPAS39Q9H9C1 MTATP6P7-201ENST00000453315 681 ntBASIC2.51□□□□□ -2.01
VIPAS39Q9H9C1 RPS3AP17-201ENST00000472594 777 ntBASIC2.51□□□□□ -2.01
VIPAS39Q9H9C1 FAM92A1P2-202ENST00000504766 877 ntBASIC2.51□□□□□ -2.01
VIPAS39Q9H9C1 AC098591.2-201ENST00000510152 315 ntBASIC2.51□□□□□ -2.01
VIPAS39Q9H9C1 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.51□□□□□ -2.01
VIPAS39Q9H9C1 SCARNA17.1-201ENST00000516211 143 ntBASIC2.51□□□□□ -2.01
VIPAS39Q9H9C1 SCARNA17.2-201ENST00000516334 143 ntBASIC2.51□□□□□ -2.01
VIPAS39Q9H9C1 IGLV3-17-201ENST00000519099 244 ntBASIC2.51□□□□□ -2.01
VIPAS39Q9H9C1 AP003392.2-201ENST00000527269 208 ntBASIC2.51□□□□□ -2.01
VIPAS39Q9H9C1 GLYCAM1-201ENST00000546596 285 ntBASIC2.51□□□□□ -2.01
VIPAS39Q9H9C1 CYCSP39-201ENST00000565821 309 ntBASIC2.51□□□□□ -2.01
VIPAS39Q9H9C1 AC025678.1-201ENST00000567861 338 ntBASIC2.51□□□□□ -2.01
VIPAS39Q9H9C1 MIR4782-201ENST00000577987 79 ntBASIC2.51□□□□□ -2.01
VIPAS39Q9H9C1 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.51□□□□□ -2.01
VIPAS39Q9H9C1 SCARNA17.4-201ENST00000614296 143 ntBASIC2.51□□□□□ -2.01
VIPAS39Q9H9C1 AC092656.1-203ENST00000624134 423 ntBASIC2.51□□□□□ -2.01
VIPAS39Q9H9C1 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
VIPAS39Q9H9C1 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
VIPAS39Q9H9C1 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
VIPAS39Q9H9C1 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 SNORD3E-201ENST00000362899 217 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 RNA5SP37-201ENST00000365420 130 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 RNU6-108P-201ENST00000365558 107 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 Y_RNA.381-201ENST00000365666 102 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 RNU6-750P-201ENST00000390946 107 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 AC068050.1-201ENST00000394891 380 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 AL138885.1-201ENST00000405921 675 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 AL358075.3-201ENST00000426289 226 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 AC006946.1-201ENST00000429106 328 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 DLGAP5P1-201ENST00000430307 464 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 AC000111.3-201ENST00000433478 193 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 AC098831.1-201ENST00000440661 216 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 BRK1P2-201ENST00000442875 223 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 AC132479.1-201ENST00000449160 144 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 AC092001.1-201ENST00000453012 261 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 AL583843.1-201ENST00000456070 346 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 RPS29P26-201ENST00000477483 171 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 RPL23AP70-201ENST00000483361 460 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 AC079804.2-201ENST00000490376 200 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 AC022493.1-201ENST00000492984 337 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 AC023194.1-201ENST00000493084 308 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 SUB1P1-201ENST00000524415 382 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 OR4R1P-201ENST00000529879 463 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 RANP3-201ENST00000530970 276 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 AP000889.2-201ENST00000532684 490 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 AC006199.1-201ENST00000548728 219 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 AC068790.2-201ENST00000602601 557 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 AC025449.1-201ENST00000603896 529 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 AC008536.2-201ENST00000607284 349 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 AC004908.3-201ENST00000610248 625 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 U4.3-201ENST00000621047 82 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 AC138649.3-201ENST00000622154 254 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 AC011155.2-201ENST00000623202 216 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 MIR7515-201ENST00000637837 67 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 HSPA8P4-201ENST00000511877 1920 ntBASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
VIPAS39Q9H9C1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
VIPAS39Q9H9C1 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
VIPAS39Q9H9C1 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
VIPAS39Q9H9C1 MIR422A-201ENST00000362286 90 ntBASIC2.49□□□□□ -2.01
VIPAS39Q9H9C1 RNU6-1287P-201ENST00000362914 107 ntBASIC2.49□□□□□ -2.01
VIPAS39Q9H9C1 RNU6-1097P-201ENST00000363586 107 ntBASIC2.49□□□□□ -2.01
VIPAS39Q9H9C1 RNU4-75P-201ENST00000364621 146 ntBASIC2.49□□□□□ -2.01
VIPAS39Q9H9C1 Y_RNA.296-201ENST00000364930 108 ntBASIC2.49□□□□□ -2.01
VIPAS39Q9H9C1 RNU6-1060P-201ENST00000384664 107 ntBASIC2.49□□□□□ -2.01
VIPAS39Q9H9C1 MIR578-201ENST00000384828 96 ntBASIC2.49□□□□□ -2.01
VIPAS39Q9H9C1 AL031779.1-201ENST00000415663 330 ntBASIC2.49□□□□□ -2.01
VIPAS39Q9H9C1 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.49□□□□□ -2.01
VIPAS39Q9H9C1 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.49□□□□□ -2.01
VIPAS39Q9H9C1 AC092427.1-202ENST00000430569 476 ntBASIC2.49□□□□□ -2.01
VIPAS39Q9H9C1 AL139132.1-201ENST00000431587 344 ntBASIC2.49□□□□□ -2.01
VIPAS39Q9H9C1 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.49□□□□□ -2.01
VIPAS39Q9H9C1 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.49□□□□□ -2.01
VIPAS39Q9H9C1 TRBV1-201ENST00000476502 284 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms