Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.98□□□□□ -1.93
ZNF541Q9H0D2 AMZ2P1-203ENST00000565833 850 ntBASIC2.98□□□□□ -1.93
ZNF541Q9H0D2 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
ZNF541Q9H0D2 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.98□□□□□ -1.93
ZNF541Q9H0D2 AL121992.2-201ENST00000606262 256 ntBASIC2.98□□□□□ -1.93
ZNF541Q9H0D2 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
ZNF541Q9H0D2 AC099842.1-201ENST00000619919 596 ntBASIC2.98□□□□□ -1.93
ZNF541Q9H0D2 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.98□□□□□ -1.93
ZNF541Q9H0D2 Z99571.1-201ENST00000636677 394 ntBASIC2.98□□□□□ -1.93
ZNF541Q9H0D2 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
ZNF541Q9H0D2 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
ZNF541Q9H0D2 RNU6-270P-201ENST00000364131 105 ntBASIC2.97□□□□□ -1.93
ZNF541Q9H0D2 CD24P4-201ENST00000382840 243 ntBASIC2.97□□□□□ -1.93
ZNF541Q9H0D2 SNORA24.1-201ENST00000384401 135 ntBASIC2.97□□□□□ -1.93
ZNF541Q9H0D2 MIR1-2-201ENST00000384961 85 ntBASIC2.97□□□□□ -1.93
ZNF541Q9H0D2 AL512633.1-201ENST00000399931 655 ntBASIC2.97□□□□□ -1.93
ZNF541Q9H0D2 RNU2-16P-201ENST00000410712 136 ntBASIC2.97□□□□□ -1.93
ZNF541Q9H0D2 AC080125.1-201ENST00000414888 684 ntBASIC2.97□□□□□ -1.93
ZNF541Q9H0D2 HMGN2P30-201ENST00000423237 256 ntBASIC2.97□□□□□ -1.93
ZNF541Q9H0D2 RPL7P46-201ENST00000425129 740 ntBASIC2.97□□□□□ -1.93
ZNF541Q9H0D2 AC073464.1-201ENST00000429823 534 ntBASIC2.97□□□□□ -1.93
ZNF541Q9H0D2 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.97□□□□□ -1.93
ZNF541Q9H0D2 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.97□□□□□ -1.93
ZNF541Q9H0D2 RPL26P9-201ENST00000457466 433 ntBASIC2.97□□□□□ -1.93
ZNF541Q9H0D2 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.97□□□□□ -1.93
ZNF541Q9H0D2 RN7SKP282-201ENST00000516824 299 ntBASIC2.97□□□□□ -1.93
ZNF541Q9H0D2 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.97□□□□□ -1.93
ZNF541Q9H0D2 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.97□□□□□ -1.93
ZNF541Q9H0D2 OR5B19P-201ENST00000531766 928 ntBASIC2.97□□□□□ -1.93
ZNF541Q9H0D2 AC021269.2-201ENST00000532318 330 ntBASIC2.97□□□□□ -1.93
ZNF541Q9H0D2 DNAJC8P1-201ENST00000554535 372 ntBASIC2.97□□□□□ -1.93
ZNF541Q9H0D2 NDUFA8P1-201ENST00000605525 367 ntBASIC2.97□□□□□ -1.93
ZNF541Q9H0D2 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
ZNF541Q9H0D2 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.97□□□□□ -1.93
ZNF541Q9H0D2 API5P2-201ENST00000397055 1498 ntBASIC2.97□□□□□ -1.93
ZNF541Q9H0D2 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.97□□□□□ -1.93
ZNF541Q9H0D2 Y_RNA.4-201ENST00000362333 112 ntBASIC2.96□□□□□ -1.93
ZNF541Q9H0D2 RNU6-108P-201ENST00000365558 107 ntBASIC2.96□□□□□ -1.93
ZNF541Q9H0D2 RNU6-259P-201ENST00000383999 107 ntBASIC2.96□□□□□ -1.93
ZNF541Q9H0D2 AL139397.2-201ENST00000404529 772 ntBASIC2.96□□□□□ -1.93
ZNF541Q9H0D2 AL590004.2-201ENST00000404787 371 ntBASIC2.96□□□□□ -1.93
ZNF541Q9H0D2 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.96□□□□□ -1.93
ZNF541Q9H0D2 RNU2-9P-201ENST00000410194 145 ntBASIC2.96□□□□□ -1.93
ZNF541Q9H0D2 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.96□□□□□ -1.93
ZNF541Q9H0D2 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.96□□□□□ -1.93
ZNF541Q9H0D2 AC092809.3-201ENST00000415453 231 ntBASIC2.96□□□□□ -1.93
ZNF541Q9H0D2 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.96□□□□□ -1.93
ZNF541Q9H0D2 MTCO3P5-201ENST00000433620 714 ntBASIC2.96□□□□□ -1.93
ZNF541Q9H0D2 MTATP6P16-201ENST00000434543 526 ntBASIC2.96□□□□□ -1.93
ZNF541Q9H0D2 AC002486.1-201ENST00000435098 391 ntBASIC2.96□□□□□ -1.93
ZNF541Q9H0D2 RPL36AP6-201ENST00000435770 321 ntBASIC2.96□□□□□ -1.93
ZNF541Q9H0D2 AL451074.3-201ENST00000437709 472 ntBASIC2.96□□□□□ -1.93
ZNF541Q9H0D2 TPT1P7-201ENST00000458300 517 ntBASIC2.96□□□□□ -1.93
ZNF541Q9H0D2 TRBV1-201ENST00000476502 284 ntBASIC2.96□□□□□ -1.93
ZNF541Q9H0D2 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.96□□□□□ -1.93
ZNF541Q9H0D2 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.96□□□□□ -1.93
ZNF541Q9H0D2 RNA5SP385-201ENST00000515947 110 ntBASIC2.96□□□□□ -1.93
ZNF541Q9H0D2 RNU6-123P-201ENST00000516163 102 ntBASIC2.96□□□□□ -1.93
ZNF541Q9H0D2 MTCYBP20-201ENST00000524239 1129 ntBASIC2.96□□□□□ -1.93
ZNF541Q9H0D2 OR11H5P-201ENST00000554039 926 ntBASIC2.96□□□□□ -1.93
ZNF541Q9H0D2 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.96□□□□□ -1.93
ZNF541Q9H0D2 AC012119.1-201ENST00000603184 222 ntBASIC2.96□□□□□ -1.93
ZNF541Q9H0D2 NUTF2P8-201ENST00000604593 363 ntBASIC2.96□□□□□ -1.93
ZNF541Q9H0D2 AP003122.6-201ENST00000623831 495 ntBASIC2.96□□□□□ -1.93
ZNF541Q9H0D2 AC139792.2-201ENST00000624218 587 ntBASIC2.96□□□□□ -1.93
ZNF541Q9H0D2 AC009161.2-201ENST00000624626 138 ntBASIC2.96□□□□□ -1.93
ZNF541Q9H0D2 U6.99-201ENST00000637524 83 ntBASIC2.96□□□□□ -1.93
ZNF541Q9H0D2 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.96□□□□□ -1.94
ZNF541Q9H0D2 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
ZNF541Q9H0D2 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
ZNF541Q9H0D2 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
ZNF541Q9H0D2 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
ZNF541Q9H0D2 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.96□□□□□ -1.94
ZNF541Q9H0D2 SNORA62.1-201ENST00000364287 154 ntBASIC2.95□□□□□ -1.94
ZNF541Q9H0D2 RNU4-75P-201ENST00000364621 146 ntBASIC2.95□□□□□ -1.94
ZNF541Q9H0D2 RNU6-1027P-201ENST00000383998 107 ntBASIC2.95□□□□□ -1.94
ZNF541Q9H0D2 RN7SKP123-201ENST00000410732 291 ntBASIC2.95□□□□□ -1.94
ZNF541Q9H0D2 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
ZNF541Q9H0D2 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.95□□□□□ -1.94
ZNF541Q9H0D2 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.95□□□□□ -1.94
ZNF541Q9H0D2 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
ZNF541Q9H0D2 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.95□□□□□ -1.94
ZNF541Q9H0D2 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.95□□□□□ -1.94
ZNF541Q9H0D2 AC132479.1-201ENST00000449160 144 ntBASIC2.95□□□□□ -1.94
ZNF541Q9H0D2 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.95□□□□□ -1.94
ZNF541Q9H0D2 MTCYBP1-201ENST00000454315 1119 ntBASIC2.95□□□□□ -1.94
ZNF541Q9H0D2 RPS26P21-201ENST00000475397 348 ntBASIC2.95□□□□□ -1.94
ZNF541Q9H0D2 AC107401.1-201ENST00000503426 685 ntBASIC2.95□□□□□ -1.94
ZNF541Q9H0D2 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.95□□□□□ -1.94
ZNF541Q9H0D2 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.95□□□□□ -1.94
ZNF541Q9H0D2 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.95□□□□□ -1.94
ZNF541Q9H0D2 CKS1BP7-201ENST00000522230 235 ntBASIC2.95□□□□□ -1.94
ZNF541Q9H0D2 AC135279.1-201ENST00000543493 504 ntBASIC2.95□□□□□ -1.94
ZNF541Q9H0D2 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.95□□□□□ -1.94
ZNF541Q9H0D2 AL158209.2-201ENST00000619266 216 ntBASIC2.95□□□□□ -1.94
ZNF541Q9H0D2 SEPT14P19-203ENST00000633205 211 ntBASIC2.95□□□□□ -1.94
ZNF541Q9H0D2 MTND4P35-201ENST00000604257 1375 ntBASIC2.95□□□□□ -1.94
ZNF541Q9H0D2 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.95□□□□□ -1.94
ZNF541Q9H0D2 AC080128.1-201ENST00000474389 1917 ntBASIC2.95□□□□□ -1.94
ZNF541Q9H0D2 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms