Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 Y_RNA.388-201ENST00000383919 113 ntBASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 RNU6-32P-201ENST00000383948 107 ntBASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 RNU6-968P-201ENST00000384076 107 ntBASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 RNU6-13P-201ENST00000384248 107 ntBASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 RNU6-12P-201ENST00000384604 107 ntBASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 RNU6-41P-201ENST00000384741 107 ntBASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 MIR10B-201ENST00000385011 110 ntBASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 RNU1-82P-201ENST00000390851 165 ntBASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 RNU6-821P-201ENST00000390995 107 ntBASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 SNORD37.2-201ENST00000391075 66 ntBASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 RPL21P65-201ENST00000406094 466 ntBASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 AL391219.1-201ENST00000422570 483 ntBASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 AL645608.4-201ENST00000423619 154 ntBASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 AC000111.2-201ENST00000448200 210 ntBASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 AL353705.4-201ENST00000449661 238 ntBASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 SNORD125-201ENST00000459538 96 ntBASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 AC012158.1-204ENST00000483430 465 ntBASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 RNU6-143P-201ENST00000516942 93 ntBASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 AC069294.1-201ENST00000608397 350 ntBASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 AC074140.1-201ENST00000621617 208 ntBASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 AL354798.1-201ENST00000622505 329 ntBASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 RNU6-336P-201ENST00000364891 107 ntBASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 RN7SKP153-201ENST00000365026 316 ntBASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 SNORA40.5-201ENST00000391061 128 ntBASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 RNU6-1025P-201ENST00000410629 104 ntBASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 RNY4P29-201ENST00000410801 97 ntBASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 RPL12P18-201ENST00000437175 325 ntBASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 RPS29P24-201ENST00000486345 171 ntBASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 RPL36AP41-201ENST00000493820 306 ntBASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 RNU6-377P-201ENST00000515965 102 ntBASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 RNU6-927P-201ENST00000516199 100 ntBASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 RNA5SP471-201ENST00000516971 106 ntBASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 AC108081.1-201ENST00000604358 221 ntBASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.78□□□□□ -1.64
COL25A1Q9BXS0 THAP12P5-201ENST00000405864 2275 ntBASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 AC021146.4-201ENST00000309229 279 ntBASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 SNORD1C-201ENST00000363315 78 ntBASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 RNU6-1155P-201ENST00000363554 107 ntBASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 RNU6-1275P-201ENST00000391087 107 ntBASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 MIR1289-1-201ENST00000408836 144 ntBASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 SSXP9-201ENST00000417503 292 ntBASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 AL158156.1-201ENST00000422509 473 ntBASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 SNORA31.22-201ENST00000517204 135 ntBASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 AP003327.1-201ENST00000529684 127 ntBASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 MIR5695-201ENST00000579717 85 ntBASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 AL121932.1-201ENST00000605542 214 ntBASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 AC010632.3-201ENST00000611377 369 ntBASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 uc_338.7-201ENST00000621834 124 ntBASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 AC092628.2-201ENST00000622492 339 ntBASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 U6.95-201ENST00000636931 70 ntBASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 AC000095.2-202ENST00000637415 154 ntBASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms