Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 COPS8P3-201ENST00000526024 482 ntBASIC3.79□□□□□ -1.8
SALL3Q9BXA9 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.79□□□□□ -1.8
SALL3Q9BXA9 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.79□□□□□ -1.8
SALL3Q9BXA9 MIR4790-201ENST00000577799 79 ntBASIC3.79□□□□□ -1.8
SALL3Q9BXA9 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.79□□□□□ -1.8
SALL3Q9BXA9 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.79□□□□□ -1.8
SALL3Q9BXA9 AL670379.6-201ENST00000603753 252 ntBASIC3.79□□□□□ -1.8
SALL3Q9BXA9 AL670379.11-201ENST00000604059 253 ntBASIC3.79□□□□□ -1.8
SALL3Q9BXA9 AC008162.1-201ENST00000604718 254 ntBASIC3.79□□□□□ -1.8
SALL3Q9BXA9 AL670379.1-201ENST00000604752 252 ntBASIC3.79□□□□□ -1.8
SALL3Q9BXA9 AL670379.5-201ENST00000605253 252 ntBASIC3.79□□□□□ -1.8
SALL3Q9BXA9 AL670379.12-201ENST00000605291 253 ntBASIC3.79□□□□□ -1.8
SALL3Q9BXA9 AL670379.8-201ENST00000605353 252 ntBASIC3.79□□□□□ -1.8
SALL3Q9BXA9 AL670379.7-201ENST00000605823 252 ntBASIC3.79□□□□□ -1.8
SALL3Q9BXA9 7SK.10-201ENST00000621414 298 ntBASIC3.79□□□□□ -1.8
SALL3Q9BXA9 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.79□□□□□ -1.8
SALL3Q9BXA9 MIR622-201ENST00000638396 96 ntBASIC3.79□□□□□ -1.8
SALL3Q9BXA9 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SALL3Q9BXA9 AC093831.2-201ENST00000624393 3427 ntBASIC3.79□□□□□ -1.8
SALL3Q9BXA9 AP003122.5-201ENST00000527668 3766 ntBASIC3.79□□□□□ -1.8
SALL3Q9BXA9 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SALL3Q9BXA9 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.78□□□□□ -1.8
SALL3Q9BXA9 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.78□□□□□ -1.8
SALL3Q9BXA9 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.78□□□□□ -1.8
SALL3Q9BXA9 SNORD116-11-201ENST00000383882 92 ntBASIC3.78□□□□□ -1.8
SALL3Q9BXA9 RNU6-1105P-201ENST00000384774 107 ntBASIC3.78□□□□□ -1.8
SALL3Q9BXA9 RNU6-837P-201ENST00000391056 108 ntBASIC3.78□□□□□ -1.8
SALL3Q9BXA9 HSPE1P26-201ENST00000405341 275 ntBASIC3.78□□□□□ -1.8
SALL3Q9BXA9 RNU6-370P-201ENST00000411008 104 ntBASIC3.78□□□□□ -1.8
SALL3Q9BXA9 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.78□□□□□ -1.8
SALL3Q9BXA9 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.78□□□□□ -1.8
SALL3Q9BXA9 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.78□□□□□ -1.8
SALL3Q9BXA9 MTND1P17-201ENST00000448961 204 ntBASIC3.78□□□□□ -1.8
SALL3Q9BXA9 Y_RNA.653-201ENST00000459091 95 ntBASIC3.78□□□□□ -1.8
SALL3Q9BXA9 RPS27P29-201ENST00000463110 252 ntBASIC3.78□□□□□ -1.8
SALL3Q9BXA9 HMGB1P25-201ENST00000468402 607 ntBASIC3.78□□□□□ -1.8
SALL3Q9BXA9 RPL7P43-201ENST00000478876 753 ntBASIC3.78□□□□□ -1.8
SALL3Q9BXA9 RN7SL432P-201ENST00000484057 298 ntBASIC3.78□□□□□ -1.8
SALL3Q9BXA9 RPL31P13-201ENST00000484151 370 ntBASIC3.78□□□□□ -1.8
SALL3Q9BXA9 AC021146.2-201ENST00000504736 556 ntBASIC3.78□□□□□ -1.8
SALL3Q9BXA9 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.78□□□□□ -1.8
SALL3Q9BXA9 MTCYBP40-201ENST00000509390 1135 ntBASIC3.78□□□□□ -1.8
SALL3Q9BXA9 NDUFB4P9-201ENST00000511646 388 ntBASIC3.78□□□□□ -1.8
SALL3Q9BXA9 AC026782.1-201ENST00000512952 449 ntBASIC3.78□□□□□ -1.8
SALL3Q9BXA9 RNU1-103P-201ENST00000516502 125 ntBASIC3.78□□□□□ -1.8
SALL3Q9BXA9 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.78□□□□□ -1.8
SALL3Q9BXA9 AC245166.1-201ENST00000521012 253 ntBASIC3.78□□□□□ -1.8
SALL3Q9BXA9 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.78□□□□□ -1.8
SALL3Q9BXA9 AP000763.2-201ENST00000540641 163 ntBASIC3.78□□□□□ -1.8
SALL3Q9BXA9 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.78□□□□□ -1.8
SALL3Q9BXA9 CR383656.7-201ENST00000548164 174 ntBASIC3.78□□□□□ -1.8
SALL3Q9BXA9 AL355836.1-201ENST00000555951 870 ntBASIC3.78□□□□□ -1.8
SALL3Q9BXA9 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.78□□□□□ -1.8
SALL3Q9BXA9 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.78□□□□□ -1.8
SALL3Q9BXA9 AC174048.1-201ENST00000603389 144 ntBASIC3.78□□□□□ -1.8
SALL3Q9BXA9 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.78□□□□□ -1.8
SALL3Q9BXA9 AP000654.2-201ENST00000605633 586 ntBASIC3.78□□□□□ -1.8
SALL3Q9BXA9 AL591516.1-201ENST00000611326 274 ntBASIC3.78□□□□□ -1.8
SALL3Q9BXA9 AC006329.2-201ENST00000611491 394 ntBASIC3.78□□□□□ -1.8
SALL3Q9BXA9 AL132822.1-201ENST00000617063 513 ntBASIC3.78□□□□□ -1.8
SALL3Q9BXA9 SNHG22-203ENST00000617833 660 ntBASIC3.78□□□□□ -1.8
SALL3Q9BXA9 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
SALL3Q9BXA9 AC244517.12-201ENST00000623581 663 ntBASIC3.78□□□□□ -1.8
SALL3Q9BXA9 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SALL3Q9BXA9 AF127577.6-201ENST00000623352 2191 ntBASIC3.78□□□□□ -1.8
SALL3Q9BXA9 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SALL3Q9BXA9 GABRG2-229ENST00000641017 3628 ntBASIC3.78□□□□□ -1.8
SALL3Q9BXA9 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.81
SALL3Q9BXA9 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SALL3Q9BXA9 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.77□□□□□ -1.81
SALL3Q9BXA9 Y_RNA.31-201ENST00000362574 102 ntBASIC3.77□□□□□ -1.81
SALL3Q9BXA9 RNU6-188P-201ENST00000364207 107 ntBASIC3.77□□□□□ -1.81
SALL3Q9BXA9 RNU6-593P-201ENST00000364716 112 ntBASIC3.77□□□□□ -1.81
SALL3Q9BXA9 Y_RNA.399-201ENST00000383955 105 ntBASIC3.77□□□□□ -1.81
SALL3Q9BXA9 RPL21P3-201ENST00000395517 478 ntBASIC3.77□□□□□ -1.81
SALL3Q9BXA9 UBE2V1P2-201ENST00000397758 440 ntBASIC3.77□□□□□ -1.81
SALL3Q9BXA9 RNU4-65P-201ENST00000410473 140 ntBASIC3.77□□□□□ -1.81
SALL3Q9BXA9 RNU2-47P-201ENST00000410649 186 ntBASIC3.77□□□□□ -1.81
SALL3Q9BXA9 RAC1P6-201ENST00000423911 575 ntBASIC3.77□□□□□ -1.81
SALL3Q9BXA9 SKA2P1-201ENST00000425592 390 ntBASIC3.77□□□□□ -1.81
SALL3Q9BXA9 AC236972.1-201ENST00000433225 199 ntBASIC3.77□□□□□ -1.81
SALL3Q9BXA9 SNAP23P1-201ENST00000433229 246 ntBASIC3.77□□□□□ -1.81
SALL3Q9BXA9 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.77□□□□□ -1.81
SALL3Q9BXA9 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.77□□□□□ -1.81
SALL3Q9BXA9 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.77□□□□□ -1.81
SALL3Q9BXA9 SCARNA18-201ENST00000459004 134 ntBASIC3.77□□□□□ -1.81
SALL3Q9BXA9 AC146507.2-201ENST00000460608 476 ntBASIC3.77□□□□□ -1.81
SALL3Q9BXA9 RPL21P8-201ENST00000465083 535 ntBASIC3.77□□□□□ -1.81
SALL3Q9BXA9 RPL21P93-201ENST00000480465 489 ntBASIC3.77□□□□□ -1.81
SALL3Q9BXA9 RPL7P23-201ENST00000493874 747 ntBASIC3.77□□□□□ -1.81
SALL3Q9BXA9 RPL23AP55-201ENST00000498163 452 ntBASIC3.77□□□□□ -1.81
SALL3Q9BXA9 RPS27P27-201ENST00000498779 255 ntBASIC3.77□□□□□ -1.81
SALL3Q9BXA9 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.77□□□□□ -1.81
SALL3Q9BXA9 RNU6-189P-201ENST00000516120 101 ntBASIC3.77□□□□□ -1.81
SALL3Q9BXA9 Y_RNA.720-201ENST00000517166 92 ntBASIC3.77□□□□□ -1.81
SALL3Q9BXA9 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.77□□□□□ -1.81
SALL3Q9BXA9 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.77□□□□□ -1.81
SALL3Q9BXA9 AP003385.6-201ENST00000531603 374 ntBASIC3.77□□□□□ -1.81
SALL3Q9BXA9 AC008521.1-201ENST00000587471 187 ntBASIC3.77□□□□□ -1.81
SALL3Q9BXA9 AC006254.3-201ENST00000603353 884 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms