Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 USP9YP18-201ENST00000425912 695 ntBASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 ELOCP14-201ENST00000428070 331 ntBASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 ELOCP7-201ENST00000439968 331 ntBASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 MTND4P25-201ENST00000441039 533 ntBASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 RPS24P13-201ENST00000442520 397 ntBASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 AL671855.1-201ENST00000446875 1203 ntBASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 DPPA3P1-201ENST00000448050 469 ntBASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 FABP5P15-201ENST00000453566 214 ntBASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 RNU7-63P-201ENST00000459054 62 ntBASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 RNU6-261P-201ENST00000459506 102 ntBASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 AC083798.1-201ENST00000472671 131 ntBASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 AL135752.1-201ENST00000479477 471 ntBASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 AC090096.1-201ENST00000489168 390 ntBASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 AC098591.2-201ENST00000510152 315 ntBASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 RNA5SP471-201ENST00000516971 106 ntBASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 RNU6-685P-201ENST00000517088 95 ntBASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 OR5AL2P-201ENST00000532185 920 ntBASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 AMZ2P1-203ENST00000565833 850 ntBASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 BNIP3P9-201ENST00000603714 553 ntBASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 AC136601.2-201ENST00000604356 474 ntBASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 AC022893.3-201ENST00000607665 437 ntBASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 AC126118.1-201ENST00000607744 628 ntBASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 AC110079.1-202ENST00000635213 138 ntBASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 SNORA62.1-201ENST00000364287 154 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 SNORA67.1-201ENST00000364749 141 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 SNORD115-7-201ENST00000365306 82 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 Y_RNA.372-201ENST00000365599 102 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 RNU6-217P-201ENST00000384164 104 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 Y_RNA.534-201ENST00000384599 112 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 MIR7-3-201ENST00000384898 110 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 MIR325-201ENST00000385260 98 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 RNU6-1158P-201ENST00000391167 107 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 AL590002.1-201ENST00000406554 418 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 BTF3L4P3-201ENST00000418879 476 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 Z82209.1-201ENST00000422141 2135 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 MTCO3P30-201ENST00000426425 670 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 ZNF863P-201ENST00000426746 417 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 AL591704.1-201ENST00000432574 275 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 FABP5P13-201ENST00000452144 328 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 PRSS3P4-201ENST00000453323 162 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 FAM133DP-201ENST00000464802 691 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 RPL36AP51-201ENST00000487216 318 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 HIGD1AP13-201ENST00000509878 289 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 AC074250.1-201ENST00000511117 192 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 SNORA40.12-201ENST00000516329 111 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 Y_RNA.689-201ENST00000516589 107 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 RNU6-143P-201ENST00000516942 93 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 RNA5SP503-201ENST00000517047 117 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 OR5AQ1P-201ENST00000527596 927 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 RANP3-201ENST00000530970 276 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 AC025678.1-201ENST00000567861 338 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 MIR3609-201ENST00000582661 80 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 AC008521.1-201ENST00000587471 187 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 AC008739.3-201ENST00000603262 127 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 AC007621.1-201ENST00000604544 437 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 AL161756.2-201ENST00000604597 246 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 AL109618.2-201ENST00000605527 211 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 AC130324.3-201ENST00000614165 542 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 AC026585.1-201ENST00000619582 524 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 AC011155.2-201ENST00000623202 216 ntBASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC28BQ9BUN5 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 AC005336.3-201ENST00000623833 2679 ntBASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 RNU6-288P-201ENST00000363690 104 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms