Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.66□□□□□ -1.82
NDC1Q9BTX1 AC012442.3-202ENST00000636742 206 ntBASIC3.66□□□□□ -1.82
NDC1Q9BTX1 IPO8P1-201ENST00000455509 3109 ntBASIC3.66□□□□□ -1.82
NDC1Q9BTX1 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
NDC1Q9BTX1 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.66□□□□□ -1.82
NDC1Q9BTX1 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NDC1Q9BTX1 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NDC1Q9BTX1 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
NDC1Q9BTX1 SNORA71.3-201ENST00000362582 128 ntBASIC3.65□□□□□ -1.83
NDC1Q9BTX1 RNA5SP124-201ENST00000362739 110 ntBASIC3.65□□□□□ -1.83
NDC1Q9BTX1 Y_RNA.153-201ENST00000363615 91 ntBASIC3.65□□□□□ -1.83
NDC1Q9BTX1 Y_RNA.176-201ENST00000363815 109 ntBASIC3.65□□□□□ -1.83
NDC1Q9BTX1 U1.1-201ENST00000384101 164 ntBASIC3.65□□□□□ -1.83
NDC1Q9BTX1 Y_RNA.485-201ENST00000384395 102 ntBASIC3.65□□□□□ -1.83
NDC1Q9BTX1 MIR199A2-201ENST00000385289 110 ntBASIC3.65□□□□□ -1.83
NDC1Q9BTX1 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
NDC1Q9BTX1 RNA5SP44-201ENST00000410446 133 ntBASIC3.65□□□□□ -1.83
NDC1Q9BTX1 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
NDC1Q9BTX1 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.65□□□□□ -1.83
NDC1Q9BTX1 RPS15AP6-201ENST00000420703 385 ntBASIC3.65□□□□□ -1.83
NDC1Q9BTX1 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.65□□□□□ -1.83
NDC1Q9BTX1 MRPS18CP6-201ENST00000423587 223 ntBASIC3.65□□□□□ -1.83
NDC1Q9BTX1 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.65□□□□□ -1.83
NDC1Q9BTX1 AL158071.1-201ENST00000430315 461 ntBASIC3.65□□□□□ -1.83
NDC1Q9BTX1 AC108059.2-201ENST00000434626 151 ntBASIC3.65□□□□□ -1.83
NDC1Q9BTX1 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.65□□□□□ -1.83
NDC1Q9BTX1 AC133473.1-201ENST00000455173 299 ntBASIC3.65□□□□□ -1.83
NDC1Q9BTX1 AC008571.1-201ENST00000467232 300 ntBASIC3.65□□□□□ -1.83
NDC1Q9BTX1 AC068781.1-201ENST00000488231 618 ntBASIC3.65□□□□□ -1.83
NDC1Q9BTX1 HMGN1P11-201ENST00000508668 303 ntBASIC3.65□□□□□ -1.83
NDC1Q9BTX1 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.65□□□□□ -1.83
NDC1Q9BTX1 GNAI2P1-201ENST00000541815 315 ntBASIC3.65□□□□□ -1.83
NDC1Q9BTX1 TRAV28-201ENST00000557548 323 ntBASIC3.65□□□□□ -1.83
NDC1Q9BTX1 AC087499.8-201ENST00000578406 226 ntBASIC3.65□□□□□ -1.83
NDC1Q9BTX1 AL160281.1-201ENST00000605307 311 ntBASIC3.65□□□□□ -1.83
NDC1Q9BTX1 AC006023.2-201ENST00000609916 167 ntBASIC3.65□□□□□ -1.83
NDC1Q9BTX1 AL121772.2-201ENST00000614331 297 ntBASIC3.65□□□□□ -1.83
NDC1Q9BTX1 RMST_4.1-201ENST00000616886 107 ntBASIC3.65□□□□□ -1.83
NDC1Q9BTX1 U4.1-201ENST00000620349 87 ntBASIC3.65□□□□□ -1.83
NDC1Q9BTX1 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.65□□□□□ -1.83
NDC1Q9BTX1 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
NDC1Q9BTX1 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NDC1Q9BTX1 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
NDC1Q9BTX1 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NDC1Q9BTX1 AC091812.1-201ENST00000432235 1948 ntBASIC3.64□□□□□ -1.83
NDC1Q9BTX1 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.64□□□□□ -1.83
NDC1Q9BTX1 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
NDC1Q9BTX1 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NDC1Q9BTX1 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NDC1Q9BTX1 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NDC1Q9BTX1 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NDC1Q9BTX1 MIR412-201ENST00000362142 91 ntBASIC3.64□□□□□ -1.83
NDC1Q9BTX1 SNORA70.4-201ENST00000365509 134 ntBASIC3.64□□□□□ -1.83
NDC1Q9BTX1 MIR449B-201ENST00000384995 97 ntBASIC3.64□□□□□ -1.83
NDC1Q9BTX1 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.64□□□□□ -1.83
NDC1Q9BTX1 MIR1302-3-201ENST00000408128 138 ntBASIC3.64□□□□□ -1.83
NDC1Q9BTX1 AL030996.1-201ENST00000411430 235 ntBASIC3.64□□□□□ -1.83
NDC1Q9BTX1 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.64□□□□□ -1.83
NDC1Q9BTX1 AC114482.1-201ENST00000418010 247 ntBASIC3.64□□□□□ -1.83
NDC1Q9BTX1 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.64□□□□□ -1.83
NDC1Q9BTX1 AC093151.1-201ENST00000427711 313 ntBASIC3.64□□□□□ -1.83
NDC1Q9BTX1 YME1L1P1-201ENST00000429435 297 ntBASIC3.64□□□□□ -1.83
NDC1Q9BTX1 AL133396.1-201ENST00000432048 687 ntBASIC3.64□□□□□ -1.83
NDC1Q9BTX1 AC011816.1-201ENST00000441346 546 ntBASIC3.64□□□□□ -1.83
NDC1Q9BTX1 AL731563.1-201ENST00000442202 214 ntBASIC3.64□□□□□ -1.83
NDC1Q9BTX1 CECR9-201ENST00000453421 199 ntBASIC3.64□□□□□ -1.83
NDC1Q9BTX1 RPL9P32-201ENST00000464118 620 ntBASIC3.64□□□□□ -1.83
NDC1Q9BTX1 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.64□□□□□ -1.83
NDC1Q9BTX1 AC026726.1-201ENST00000512859 601 ntBASIC3.64□□□□□ -1.83
NDC1Q9BTX1 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.64□□□□□ -1.83
NDC1Q9BTX1 RNA5SP468-201ENST00000516782 93 ntBASIC3.64□□□□□ -1.83
NDC1Q9BTX1 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.64□□□□□ -1.83
NDC1Q9BTX1 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NDC1Q9BTX1 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.64□□□□□ -1.83
NDC1Q9BTX1 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.64□□□□□ -1.83
NDC1Q9BTX1 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.64□□□□□ -1.83
NDC1Q9BTX1 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.64□□□□□ -1.83
NDC1Q9BTX1 AC090425.1-201ENST00000610007 140 ntBASIC3.64□□□□□ -1.83
NDC1Q9BTX1 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.64□□□□□ -1.83
NDC1Q9BTX1 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.64□□□□□ -1.83
NDC1Q9BTX1 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NDC1Q9BTX1 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NDC1Q9BTX1 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NDC1Q9BTX1 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NDC1Q9BTX1 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NDC1Q9BTX1 AC007785.2-201ENST00000598627 1916 ntBASIC3.64□□□□□ -1.83
NDC1Q9BTX1 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.64□□□□□ -1.83
NDC1Q9BTX1 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
NDC1Q9BTX1 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
NDC1Q9BTX1 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.63□□□□□ -1.83
NDC1Q9BTX1 AL161912.2-201ENST00000565707 3007 ntBASIC3.63□□□□□ -1.83
NDC1Q9BTX1 NCAPGP1-201ENST00000505112 1814 ntBASIC3.63□□□□□ -1.83
NDC1Q9BTX1 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NDC1Q9BTX1 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
NDC1Q9BTX1 FAM35DP-201ENST00000323387 2712 ntBASIC3.63□□□□□ -1.83
NDC1Q9BTX1 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.63□□□□□ -1.83
NDC1Q9BTX1 SNORD46.1-201ENST00000364139 104 ntBASIC3.63□□□□□ -1.83
NDC1Q9BTX1 SET-203ENST00000372688 801 ntTSL 2 BASIC3.63□□□□□ -1.83
NDC1Q9BTX1 Y_RNA.389-201ENST00000383924 113 ntBASIC3.63□□□□□ -1.83
NDC1Q9BTX1 RNA5SP129-201ENST00000410276 118 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms