Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC104073.1-201ENST00000451988 151 ntBASIC0.84□□□□□ -2.28
ABCA3Q99758 AP001025.1-201ENST00000486139 332 ntBASIC0.84□□□□□ -2.28
ABCA3Q99758 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC0.84□□□□□ -2.28
ABCA3Q99758 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.84□□□□□ -2.28
ABCA3Q99758 AC015688.2-201ENST00000584523 262 ntBASIC0.84□□□□□ -2.28
ABCA3Q99758 FTX_3.1-201ENST00000610451 147 ntBASIC0.84□□□□□ -2.28
ABCA3Q99758 DUSP12P1-201ENST00000612874 516 ntBASIC0.84□□□□□ -2.28
ABCA3Q99758 AC005832.2-201ENST00000538921 1430 ntBASIC0.83□□□□□ -2.28
ABCA3Q99758 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
ABCA3Q99758 MTND5P31-201ENST00000419366 1374 ntBASIC0.83□□□□□ -2.28
ABCA3Q99758 MIR218-1-201ENST00000384999 110 ntBASIC0.83□□□□□ -2.28
ABCA3Q99758 RPL37P10-201ENST00000412884 288 ntBASIC0.83□□□□□ -2.28
ABCA3Q99758 AL512637.2-201ENST00000431287 1256 ntBASIC0.83□□□□□ -2.28
ABCA3Q99758 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.83□□□□□ -2.28
ABCA3Q99758 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.83□□□□□ -2.28
ABCA3Q99758 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.83□□□□□ -2.28
ABCA3Q99758 AC008379.1-201ENST00000463655 464 ntBASIC0.83□□□□□ -2.28
ABCA3Q99758 AC098591.2-201ENST00000510152 315 ntBASIC0.83□□□□□ -2.28
ABCA3Q99758 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC0.83□□□□□ -2.28
ABCA3Q99758 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.83□□□□□ -2.28
ABCA3Q99758 AC025857.1-201ENST00000525252 377 ntBASIC0.83□□□□□ -2.28
ABCA3Q99758 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.83□□□□□ -2.28
ABCA3Q99758 AC090772.4-201ENST00000623599 362 ntBASIC0.83□□□□□ -2.28
ABCA3Q99758 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
ABCA3Q99758 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
ABCA3Q99758 AC096649.2-201ENST00000416186 393 ntBASIC0.82□□□□□ -2.28
ABCA3Q99758 BEND7P1-201ENST00000422058 457 ntBASIC0.82□□□□□ -2.28
ABCA3Q99758 AL160275.3-201ENST00000423876 471 ntBASIC0.82□□□□□ -2.28
ABCA3Q99758 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.82□□□□□ -2.28
ABCA3Q99758 AP003355.1-201ENST00000518956 587 ntBASIC0.82□□□□□ -2.28
ABCA3Q99758 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.82□□□□□ -2.28
ABCA3Q99758 DUXAP1-201ENST00000556632 463 ntBASIC0.82□□□□□ -2.28
ABCA3Q99758 MIR4765-201ENST00000585007 77 ntBASIC0.82□□□□□ -2.28
ABCA3Q99758 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.82□□□□□ -2.28
ABCA3Q99758 AC010900.2-201ENST00000604508 210 ntBASIC0.82□□□□□ -2.28
ABCA3Q99758 AL138963.2-201ENST00000605137 226 ntBASIC0.82□□□□□ -2.28
ABCA3Q99758 AC092953.2-201ENST00000608000 699 ntBASIC0.82□□□□□ -2.28
ABCA3Q99758 AC126177.8-201ENST00000618339 1015 ntBASIC0.82□□□□□ -2.28
ABCA3Q99758 RNU6-338P-201ENST00000383888 105 ntBASIC0.81□□□□□ -2.28
ABCA3Q99758 RNU6-1222P-201ENST00000384615 107 ntBASIC0.81□□□□□ -2.28
ABCA3Q99758 FABP5P14-201ENST00000437273 393 ntBASIC0.81□□□□□ -2.28
ABCA3Q99758 AL592447.1-201ENST00000447592 540 ntBASIC0.81□□□□□ -2.28
ABCA3Q99758 AC112492.4-201ENST00000456549 352 ntBASIC0.81□□□□□ -2.28
ABCA3Q99758 HMGB1P36-201ENST00000487709 576 ntBASIC0.81□□□□□ -2.28
ABCA3Q99758 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.81□□□□□ -2.28
ABCA3Q99758 MIR8074-201ENST00000615081 81 ntBASIC0.81□□□□□ -2.28
ABCA3Q99758 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
ABCA3Q99758 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.81□□□□□ -2.28
ABCA3Q99758 Y_RNA.67-201ENST00000362870 100 ntBASIC0.81□□□□□ -2.28
ABCA3Q99758 RNU6-441P-201ENST00000384545 106 ntBASIC0.81□□□□□ -2.28
ABCA3Q99758 AL161788.1-201ENST00000441805 169 ntBASIC0.81□□□□□ -2.28
ABCA3Q99758 RPL39P28-201ENST00000465655 155 ntBASIC0.81□□□□□ -2.28
ABCA3Q99758 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.81□□□□□ -2.28
ABCA3Q99758 AC109927.2-201ENST00000506416 303 ntBASIC0.81□□□□□ -2.28
ABCA3Q99758 UBL5P1-201ENST00000507979 193 ntBASIC0.81□□□□□ -2.28
ABCA3Q99758 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.81□□□□□ -2.28
ABCA3Q99758 RNA5SP404-201ENST00000517118 132 ntBASIC0.81□□□□□ -2.28
ABCA3Q99758 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.81□□□□□ -2.28
ABCA3Q99758 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
ABCA3Q99758 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC0.81□□□□□ -2.28
ABCA3Q99758 BX322635.1-201ENST00000605804 496 ntBASIC0.81□□□□□ -2.28
ABCA3Q99758 MIR6866-201ENST00000638146 69 ntBASIC0.81□□□□□ -2.28
ABCA3Q99758 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.8□□□□□ -2.28
ABCA3Q99758 AL359854.1-201ENST00000614203 1594 ntBASIC0.8□□□□□ -2.28
ABCA3Q99758 Y_RNA.60-201ENST00000362831 98 ntBASIC0.8□□□□□ -2.28
ABCA3Q99758 RNU6-418P-201ENST00000384035 107 ntBASIC0.8□□□□□ -2.28
ABCA3Q99758 MIR518A2-201ENST00000384966 87 ntBASIC0.8□□□□□ -2.28
ABCA3Q99758 MED14P1-201ENST00000430517 648 ntBASIC0.8□□□□□ -2.28
ABCA3Q99758 MTND5P15-201ENST00000434246 349 ntBASIC0.8□□□□□ -2.28
ABCA3Q99758 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.8□□□□□ -2.28
ABCA3Q99758 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.8□□□□□ -2.28
ABCA3Q99758 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.8□□□□□ -2.28
ABCA3Q99758 SNORA62.5-201ENST00000516634 120 ntBASIC0.8□□□□□ -2.28
ABCA3Q99758 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.8□□□□□ -2.28
ABCA3Q99758 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.8□□□□□ -2.28
ABCA3Q99758 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.8□□□□□ -2.28
ABCA3Q99758 NIFKP6-201ENST00000598115 845 ntBASIC0.8□□□□□ -2.28
ABCA3Q99758 AC004775.1-201ENST00000607389 753 ntBASIC0.8□□□□□ -2.28
ABCA3Q99758 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
ABCA3Q99758 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.79□□□□□ -2.28
ABCA3Q99758 RNU2-47P-201ENST00000410649 186 ntBASIC0.79□□□□□ -2.28
ABCA3Q99758 RNU2-63P-201ENST00000410792 194 ntBASIC0.79□□□□□ -2.28
ABCA3Q99758 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.79□□□□□ -2.28
ABCA3Q99758 ARPC3P5-201ENST00000448802 534 ntBASIC0.79□□□□□ -2.28
ABCA3Q99758 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.79□□□□□ -2.28
ABCA3Q99758 RNA5SP57-201ENST00000459463 123 ntBASIC0.79□□□□□ -2.28
ABCA3Q99758 AC103851.1-201ENST00000506833 274 ntBASIC0.79□□□□□ -2.28
ABCA3Q99758 OR8K4P-201ENST00000534608 872 ntBASIC0.79□□□□□ -2.28
ABCA3Q99758 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC0.79□□□□□ -2.28
ABCA3Q99758 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC0.79□□□□□ -2.28
ABCA3Q99758 AC096720.1-201ENST00000604441 183 ntBASIC0.79□□□□□ -2.28
ABCA3Q99758 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.79□□□□□ -2.28
ABCA3Q99758 AL078604.3-201ENST00000615580 211 ntBASIC0.79□□□□□ -2.28
ABCA3Q99758 ZNF663P-202ENST00000641770 1131 ntBASIC0.79□□□□□ -2.28
ABCA3Q99758 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.79□□□□□ -2.28
ABCA3Q99758 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
ABCA3Q99758 AL139098.1-201ENST00000407291 389 ntBASIC0.78□□□□□ -2.28
ABCA3Q99758 AC009310.1-201ENST00000414414 451 ntBASIC0.78□□□□□ -2.28
ABCA3Q99758 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
ABCA3Q99758 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms