Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 CYCSP33-201ENST00000414485 327 ntBASIC3.15□□□□□ -1.91
NPAS1Q99742 SKA2P1-201ENST00000425592 390 ntBASIC3.15□□□□□ -1.91
NPAS1Q99742 AC006989.1-201ENST00000427212 131 ntBASIC3.15□□□□□ -1.91
NPAS1Q99742 MYL8P-204ENST00000431574 518 ntBASIC3.15□□□□□ -1.91
NPAS1Q99742 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.15□□□□□ -1.91
NPAS1Q99742 NDUFB1P2-201ENST00000449477 176 ntBASIC3.15□□□□□ -1.91
NPAS1Q99742 RBMY2UP-201ENST00000453474 324 ntBASIC3.15□□□□□ -1.91
NPAS1Q99742 AC104472.2-201ENST00000469035 601 ntBASIC3.15□□□□□ -1.91
NPAS1Q99742 RN7SL594P-201ENST00000470590 287 ntBASIC3.15□□□□□ -1.91
NPAS1Q99742 AC117503.1-201ENST00000472241 394 ntBASIC3.15□□□□□ -1.91
NPAS1Q99742 RNU6-875P-201ENST00000516488 106 ntBASIC3.15□□□□□ -1.91
NPAS1Q99742 RNU6-1332P-201ENST00000516666 104 ntBASIC3.15□□□□□ -1.91
NPAS1Q99742 RNU6-703P-201ENST00000516946 107 ntBASIC3.15□□□□□ -1.91
NPAS1Q99742 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.15□□□□□ -1.91
NPAS1Q99742 AL391261.3-201ENST00000557194 520 ntBASIC3.15□□□□□ -1.91
NPAS1Q99742 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.15□□□□□ -1.91
NPAS1Q99742 LRRC37A5P-203ENST00000580181 585 ntBASIC3.15□□□□□ -1.91
NPAS1Q99742 MIR5692C1-201ENST00000585309 91 ntBASIC3.15□□□□□ -1.91
NPAS1Q99742 HMGN2P15-201ENST00000585707 270 ntBASIC3.15□□□□□ -1.91
NPAS1Q99742 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.15□□□□□ -1.91
NPAS1Q99742 MIR3199-2-201ENST00000636243 86 ntBASIC3.15□□□□□ -1.91
NPAS1Q99742 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NPAS1Q99742 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.15□□□□□ -1.91
NPAS1Q99742 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NPAS1Q99742 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NPAS1Q99742 MAPK10-362ENST00000641864 4484 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.14□□□□□ -1.91
NPAS1Q99742 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.14□□□□□ -1.91
NPAS1Q99742 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 AC058791.1-201ENST00000608412 3198 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 AC138393.1-203ENST00000327086 343 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 RNU6-37P-201ENST00000362692 107 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 RNA5SP197-201ENST00000363357 119 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 Y_RNA.142-201ENST00000363491 102 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 RNU6-11P-201ENST00000364234 107 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 RNU6-7-201ENST00000364784 107 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 RNU6-8-201ENST00000365467 107 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 RNU6-898P-201ENST00000365627 104 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 RNU6-25P-201ENST00000383873 107 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 RNU6-1-201ENST00000383898 107 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 RNU6-214P-201ENST00000384130 107 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 RNU6-48P-201ENST00000384161 107 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 RNU6-36P-201ENST00000384172 107 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 RNU6-4P-201ENST00000384205 107 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 RNU6-5P-201ENST00000384238 107 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 RNU6-3P-201ENST00000384314 107 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 RNU6-16P-201ENST00000384385 107 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 RNU6-15P-201ENST00000384534 107 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 RNU6-2-201ENST00000384627 107 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 RNU6-29P-201ENST00000384637 107 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 RNU6-9-201ENST00000384776 107 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 RNU6-33P-201ENST00000384793 107 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 MIR218-2-201ENST00000385006 110 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 RAP1BP3-201ENST00000407180 549 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 RN7SKP32-201ENST00000410167 303 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.14□□□□□ -1.91
NPAS1Q99742 AC009969.1-201ENST00000438726 172 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.14□□□□□ -1.91
NPAS1Q99742 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.14□□□□□ -1.91
NPAS1Q99742 AC233279.1-201ENST00000455300 423 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 AC087884.1-201ENST00000469738 328 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 RN7SL293P-201ENST00000481765 281 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 AC011005.2-201ENST00000487324 359 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 RPS27AP10-201ENST00000496103 208 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 TRBVA-201ENST00000498804 316 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 MTND4LP22-201ENST00000508209 276 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 AC114781.4-201ENST00000513707 639 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 RNU6-256P-201ENST00000516747 97 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 IGKV2-26-201ENST00000518305 343 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.14□□□□□ -1.91
NPAS1Q99742 AC068657.1-201ENST00000520807 306 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
NPAS1Q99742 MIR4742-201ENST00000581069 85 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.14□□□□□ -1.91
NPAS1Q99742 AC012468.1-201ENST00000604888 430 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 RNU6-6P-201ENST00000606623 107 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 AC009994.1-201ENST00000606889 253 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 AC107294.3-201ENST00000609211 526 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 uc_338.5-201ENST00000611839 155 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 AP003355.3-201ENST00000623465 114 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 U2.21-201ENST00000637295 81 ntBASIC3.14□□□□□ -1.91
NPAS1Q99742 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.14□□□□□ -1.91
NPAS1Q99742 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.14□□□□□ -1.91
NPAS1Q99742 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
NPAS1Q99742 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
NPAS1Q99742 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.13□□□□□ -1.91
NPAS1Q99742 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NPAS1Q99742 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NPAS1Q99742 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
NPAS1Q99742 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.13□□□□□ -1.91
NPAS1Q99742 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.13□□□□□ -1.91
NPAS1Q99742 AC233263.6-201ENST00000631132 1963 ntBASIC3.13□□□□□ -1.91
NPAS1Q99742 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.13□□□□□ -1.91
NPAS1Q99742 RNU1-75P-201ENST00000347264 129 ntBASIC3.13□□□□□ -1.91
NPAS1Q99742 RNA5SP119-201ENST00000362715 117 ntBASIC3.13□□□□□ -1.91
NPAS1Q99742 RNU6-384P-201ENST00000364900 104 ntBASIC3.13□□□□□ -1.91
NPAS1Q99742 Y_RNA.356-201ENST00000365475 113 ntBASIC3.13□□□□□ -1.91
NPAS1Q99742 MIR23B-201ENST00000384832 97 ntBASIC3.13□□□□□ -1.91
NPAS1Q99742 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.13□□□□□ -1.91
NPAS1Q99742 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms