Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.08□□□□□ -1.92
PKP4Q99569 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.08□□□□□ -1.92
PKP4Q99569 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.08□□□□□ -1.92
PKP4Q99569 AC125238.1-201ENST00000448842 249 ntBASIC3.08□□□□□ -1.92
PKP4Q99569 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.08□□□□□ -1.92
PKP4Q99569 AL590639.1-201ENST00000456484 337 ntBASIC3.08□□□□□ -1.92
PKP4Q99569 SNRPFP3-201ENST00000457792 225 ntBASIC3.08□□□□□ -1.92
PKP4Q99569 AL162395.1-201ENST00000457882 422 ntBASIC3.08□□□□□ -1.92
PKP4Q99569 RNU7-180P-201ENST00000459240 63 ntBASIC3.08□□□□□ -1.92
PKP4Q99569 RNU6-329P-201ENST00000459618 107 ntBASIC3.08□□□□□ -1.92
PKP4Q99569 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.08□□□□□ -1.92
PKP4Q99569 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.08□□□□□ -1.92
PKP4Q99569 RNU4-49P-201ENST00000516080 140 ntBASIC3.08□□□□□ -1.92
PKP4Q99569 Y_RNA.701-201ENST00000516812 110 ntBASIC3.08□□□□□ -1.92
PKP4Q99569 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.08□□□□□ -1.92
PKP4Q99569 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.08□□□□□ -1.92
PKP4Q99569 AC093027.1-201ENST00000546698 429 ntBASIC3.08□□□□□ -1.92
PKP4Q99569 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.08□□□□□ -1.92
PKP4Q99569 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.08□□□□□ -1.92
PKP4Q99569 AC078899.3-201ENST00000599065 212 ntBASIC3.08□□□□□ -1.92
PKP4Q99569 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.08□□□□□ -1.92
PKP4Q99569 AC007179.3-201ENST00000604976 235 ntBASIC3.08□□□□□ -1.92
PKP4Q99569 AC021646.1-201ENST00000605469 484 ntBASIC3.08□□□□□ -1.92
PKP4Q99569 AL050343.2-201ENST00000607338 280 ntBASIC3.08□□□□□ -1.92
PKP4Q99569 AC064836.2-201ENST00000609491 462 ntBASIC3.08□□□□□ -1.92
PKP4Q99569 AL591516.1-201ENST00000611326 274 ntBASIC3.08□□□□□ -1.92
PKP4Q99569 AL161629.2-201ENST00000615347 275 ntBASIC3.08□□□□□ -1.92
PKP4Q99569 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.08□□□□□ -1.92
PKP4Q99569 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.08□□□□□ -1.92
PKP4Q99569 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
PKP4Q99569 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PKP4Q99569 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.08□□□□□ -1.92
PKP4Q99569 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.07□□□□□ -1.92
PKP4Q99569 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.07□□□□□ -1.92
PKP4Q99569 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PKP4Q99569 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PKP4Q99569 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.07□□□□□ -1.92
PKP4Q99569 MIR208A-201ENST00000362287 71 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 RNU6-270P-201ENST00000364131 105 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 RNA5SP387-201ENST00000364226 106 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 SNORA23-201ENST00000365128 182 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 Y_RNA.333-201ENST00000365274 102 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 RNU6-61P-201ENST00000365528 109 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 AL359634.1-202ENST00000404721 284 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 RN7SKP140-201ENST00000411196 284 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 RNU6-387P-201ENST00000411331 105 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.07□□□□□ -1.92
PKP4Q99569 RAC1P6-201ENST00000423911 575 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.07□□□□□ -1.92
PKP4Q99569 AC104332.2-201ENST00000429959 156 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.07□□□□□ -1.92
PKP4Q99569 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.07□□□□□ -1.92
PKP4Q99569 AC006028.1-201ENST00000438379 402 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 Z82210.1-201ENST00000440037 231 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 RPL23AP58-201ENST00000440453 469 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 RPS3AP12-201ENST00000443616 753 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.07□□□□□ -1.92
PKP4Q99569 RN7SL863P-201ENST00000462370 296 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 RPS20P22-201ENST00000473700 357 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 AC109925.1-201ENST00000478069 331 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 MTCO3P9-201ENST00000506989 781 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 RNA5SP217-201ENST00000515959 91 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 Y_RNA.665-201ENST00000516177 98 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 RNU6-277P-201ENST00000516272 106 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 RNU6-840P-201ENST00000517275 65 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.07□□□□□ -1.92
PKP4Q99569 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.07□□□□□ -1.92
PKP4Q99569 MTND4P7-201ENST00000523876 130 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 SCOCP1-201ENST00000554676 349 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 TRAV28-201ENST00000557548 323 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 AL355375.2-201ENST00000574825 175 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 AC005498.1-201ENST00000592125 465 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 AC107294.3-201ENST00000609211 526 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 AC004852.3-201ENST00000614131 326 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 uc_338.34-201ENST00000617467 174 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 AC018692.3-201ENST00000623929 123 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 MIR1302-1-201ENST00000637932 143 ntBASIC3.07□□□□□ -1.92
PKP4Q99569 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
PKP4Q99569 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PKP4Q99569 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.07□□□□□ -1.92
PKP4Q99569 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
PKP4Q99569 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.06□□□□□ -1.92
PKP4Q99569 RNU6-1287P-201ENST00000362914 107 ntBASIC3.06□□□□□ -1.92
PKP4Q99569 RNU6-522P-201ENST00000364497 107 ntBASIC3.06□□□□□ -1.92
PKP4Q99569 Y_RNA.373-201ENST00000365600 103 ntBASIC3.06□□□□□ -1.92
PKP4Q99569 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
PKP4Q99569 RNU6-1060P-201ENST00000384664 107 ntBASIC3.06□□□□□ -1.92
PKP4Q99569 Y_RNA.576-201ENST00000384781 102 ntBASIC3.06□□□□□ -1.92
PKP4Q99569 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.06□□□□□ -1.92
PKP4Q99569 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PKP4Q99569 AL031121.1-201ENST00000406553 254 ntBASIC3.06□□□□□ -1.92
PKP4Q99569 RNA5SP293-201ENST00000410527 113 ntBASIC3.06□□□□□ -1.92
PKP4Q99569 RNU4-47P-201ENST00000410876 114 ntBASIC3.06□□□□□ -1.92
PKP4Q99569 RPL32P35-201ENST00000415214 394 ntBASIC3.06□□□□□ -1.92
PKP4Q99569 NDUFB4P5-201ENST00000415445 361 ntBASIC3.06□□□□□ -1.92
PKP4Q99569 AC092047.1-201ENST00000424997 240 ntBASIC3.06□□□□□ -1.92
PKP4Q99569 HMGB1P18-201ENST00000438801 619 ntBASIC3.06□□□□□ -1.92
PKP4Q99569 AC007677.1-201ENST00000445757 515 ntBASIC3.06□□□□□ -1.92
PKP4Q99569 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms