Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.37□□□□□ -2.03
RAB40CQ96S21 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.37□□□□□ -2.03
RAB40CQ96S21 ZNF680P1-201ENST00000436625 1469 ntBASIC2.37□□□□□ -2.03
RAB40CQ96S21 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.37□□□□□ -2.03
RAB40CQ96S21 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.36□□□□□ -2.03
RAB40CQ96S21 MIR22-201ENST00000362190 85 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 Y_RNA.194-201ENST00000363985 102 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 RNU6-371P-201ENST00000364283 108 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 SNORD14B-201ENST00000364533 90 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 RNU6-1103P-201ENST00000384150 107 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 RNVU1-14-201ENST00000384770 164 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 MIR181A2-201ENST00000384863 110 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 MIR592-201ENST00000384959 97 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 MIR147B-201ENST00000390185 80 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 RNU2-66P-201ENST00000410650 161 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 RNU2-16P-201ENST00000410712 136 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 RNU4-47P-201ENST00000410876 114 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 AC016831.2-201ENST00000417179 352 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 MTCO3P30-201ENST00000426425 670 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 AC006946.1-201ENST00000429106 328 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 AL627311.1-201ENST00000431514 115 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 AC000111.3-201ENST00000433478 193 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 MTND1P18-201ENST00000448191 573 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.36□□□□□ -2.03
RAB40CQ96S21 NDUFB1P2-201ENST00000449477 176 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.36□□□□□ -2.03
RAB40CQ96S21 RNU7-26P-201ENST00000458980 63 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.36□□□□□ -2.03
RAB40CQ96S21 AC116655.1-201ENST00000508324 901 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 MTCO3P7-201ENST00000510008 774 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 SCARNA3-201ENST00000517097 143 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RAB40CQ96S21 FAM92A1P1-201ENST00000528023 890 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.36□□□□□ -2.03
RAB40CQ96S21 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.36□□□□□ -2.03
RAB40CQ96S21 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.36□□□□□ -2.03
RAB40CQ96S21 AC092325.1-201ENST00000566449 554 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 MIR5680-201ENST00000577577 84 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 MIR4703-201ENST00000577728 79 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 MIR3199-1-201ENST00000582434 88 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 MIR3605-201ENST00000583214 100 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.36□□□□□ -2.03
RAB40CQ96S21 AL391646.1-201ENST00000603860 190 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 AP000787.2-201ENST00000604432 568 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 AC103591.3-201ENST00000608684 209 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 AC007684.1-201ENST00000609671 477 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 AC104073.3-201ENST00000610942 955 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 Z99129.1-201ENST00000612510 255 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 uc_338.11-201ENST00000619132 160 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 AC018692.3-201ENST00000623929 123 ntBASIC2.36□□□□□ -2.03
RAB40CQ96S21 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.36□□□□□ -2.03
RAB40CQ96S21 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
RAB40CQ96S21 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RAB40CQ96S21 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
RAB40CQ96S21 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RAB40CQ96S21 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RAB40CQ96S21 Y_RNA.1-201ENST00000352915 104 ntBASIC2.35□□□□□ -2.03
RAB40CQ96S21 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RAB40CQ96S21 SNORA63.1-201ENST00000362493 131 ntBASIC2.35□□□□□ -2.03
RAB40CQ96S21 MIR10A-201ENST00000385043 110 ntBASIC2.35□□□□□ -2.03
RAB40CQ96S21 RNU6-220P-201ENST00000390919 107 ntBASIC2.35□□□□□ -2.03
RAB40CQ96S21 RNU4-46P-201ENST00000410818 138 ntBASIC2.35□□□□□ -2.03
RAB40CQ96S21 AL592148.1-201ENST00000413568 445 ntBASIC2.35□□□□□ -2.03
RAB40CQ96S21 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.35□□□□□ -2.03
RAB40CQ96S21 AC010975.2-201ENST00000427781 588 ntBASIC2.35□□□□□ -2.03
RAB40CQ96S21 SUMO1P4-201ENST00000429430 302 ntBASIC2.35□□□□□ -2.03
RAB40CQ96S21 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.35□□□□□ -2.03
RAB40CQ96S21 Z75741.1-201ENST00000446793 314 ntBASIC2.35□□□□□ -2.03
RAB40CQ96S21 AL121769.1-201ENST00000469473 401 ntBASIC2.35□□□□□ -2.03
RAB40CQ96S21 RN7SL807P-201ENST00000470923 297 ntBASIC2.35□□□□□ -2.03
RAB40CQ96S21 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.35□□□□□ -2.03
RAB40CQ96S21 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RAB40CQ96S21 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.35□□□□□ -2.03
RAB40CQ96S21 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.35□□□□□ -2.03
RAB40CQ96S21 RN7SKP272-201ENST00000516988 232 ntBASIC2.35□□□□□ -2.03
RAB40CQ96S21 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.35□□□□□ -2.03
RAB40CQ96S21 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.35□□□□□ -2.03
RAB40CQ96S21 AC008121.1-201ENST00000603244 268 ntBASIC2.35□□□□□ -2.03
RAB40CQ96S21 SRGNP1-201ENST00000603392 451 ntBASIC2.35□□□□□ -2.03
RAB40CQ96S21 AC087045.1-201ENST00000605856 382 ntBASIC2.35□□□□□ -2.03
RAB40CQ96S21 AC069200.1-201ENST00000609511 323 ntBASIC2.35□□□□□ -2.03
RAB40CQ96S21 HMGB1P24-202ENST00000615653 685 ntBASIC2.35□□□□□ -2.03
RAB40CQ96S21 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.35□□□□□ -2.03
RAB40CQ96S21 AC091953.5-201ENST00000622919 233 ntBASIC2.35□□□□□ -2.03
RAB40CQ96S21 AC004777.1-201ENST00000624317 287 ntBASIC2.35□□□□□ -2.03
RAB40CQ96S21 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RAB40CQ96S21 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
RAB40CQ96S21 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
RAB40CQ96S21 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
RAB40CQ96S21 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
RAB40CQ96S21 MTND5P26-201ENST00000426018 1752 ntBASIC2.34□□□□□ -2.03
RAB40CQ96S21 SNORA38-201ENST00000363946 132 ntBASIC2.34□□□□□ -2.03
RAB40CQ96S21 RNU1-100P-201ENST00000365255 165 ntBASIC2.34□□□□□ -2.03
RAB40CQ96S21 SNORA9.2-201ENST00000365361 133 ntBASIC2.34□□□□□ -2.03
RAB40CQ96S21 RNU6-259P-201ENST00000383999 107 ntBASIC2.34□□□□□ -2.03
RAB40CQ96S21 Y_RNA.436-201ENST00000384097 102 ntBASIC2.34□□□□□ -2.03
RAB40CQ96S21 MIR34A-201ENST00000385130 110 ntBASIC2.34□□□□□ -2.03
RAB40CQ96S21 AC068050.1-201ENST00000394891 380 ntBASIC2.34□□□□□ -2.03
RAB40CQ96S21 RNU4-55P-201ENST00000410731 137 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms